Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:H21 5.28417
2R:R:Y22 5.824519
3R:R:F46 4.045407
4R:R:I53 2.76547
5R:R:N57 5.245449
6R:R:R73 8.4675475
7R:R:Y75 6.996559
8R:R:F76 4.46464
9R:R:F77 6.234508
10R:R:D85 7.035449
11R:R:Y92 5.172506
12R:R:M98 3.3675414
13R:R:W111 8.436519
14R:R:F112 7.11416
15R:R:R114 5.225616
16R:R:E115 7.7415
17R:R:M118 5.9475406
18R:R:F119 6.27425
19R:R:L130 4.66487
20R:R:E135 8.31479
21R:R:R136 4.8625439
22R:R:V154 5.68407
23R:R:W162 6.4225409
24R:R:P172 9.3875405
25R:R:L182 5.39413
26R:R:I188 4.7575414
27R:R:Y196 9.786526
28R:R:C200 5.7125426
29R:R:Y215 4.7575409
30R:R:Y219 5.7475406
31R:R:N234 7.12494
32R:R:W256 7.866528
33R:R:L259 5.51426
34R:R:F260 3.77506
35R:R:D266 4.9225414
36R:R:L277 3.666512
37R:R:N294 6.685439
38R:R:Y298 4.88333639
39R:R:L300 3.2375405
40L:L:?1 6.616921320
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:H21 R:R:L191 13.564711.57YesNo174
2R:R:L191 R:R:W111 14.447411.39NoYes149
3R:R:L18 R:R:W111 11.71943.42NoYes179
4R:R:R114 R:R:W111 29.72587YesYes169
5R:R:N95 R:R:R114 44.22956.03NoYes066
6R:R:M118 R:R:N95 44.94328.41YesNo066
7R:R:M118 R:R:Y92 27.94639.58YesYes066
8R:R:C50 R:R:Y92 11.75234.03NoYes066
9R:R:C50 R:R:K93 10.31553.23NoNo066
10R:R:I53 R:R:V288 11.46593.07YesNo077
11R:R:V288 R:R:Y92 11.0013.79NoYes076
12R:R:G89 R:R:I53 10.30141.76NoYes077
13R:R:I64 R:R:V60 16.27853.07NoNo089
14R:R:I64 R:R:I78 18.86092.94NoNo088
15R:R:I78 R:R:Y298 20.1383.63NoYes089
16R:R:N294 R:R:Y298 1003.49YesYes399
17R:R:N290 R:R:N294 90.994512.26NoYes099
18R:R:N290 R:R:W256 91.03212.43NoYes098
19L:L:?1 R:R:W256 80.29866.01YesYes208
20L:L:?1 R:R:M118 59.66294.27YesYes006
21R:R:L300 R:R:T299 11.82742.95YesNo057
22R:R:M305 R:R:T299 13.09513.01NoNo087
23R:R:M305 R:R:Y75 15.54148.38NoYes089
24R:R:N72 R:R:Y75 25.14322.33NoYes079
25R:R:M74 R:R:N72 26.30764.21NoNo087
26R:R:M74 R:R:R136 36.95184.96NoYes089
27R:R:R136 R:R:Y298 51.38513.09YesYes399
28R:R:F77 R:R:V154 27.66469.18YesYes087
29R:R:F77 R:R:I132 42.0185.02YesNo089
30R:R:I132 R:R:Y298 41.24336.04NoYes399
31R:R:E135 R:R:M74 18.78584.06YesNo098
32R:R:E135 R:R:F77 15.10949.33YesYes098
33R:R:E135 R:R:R73 26.227812.79YesYes795
34R:R:R73 R:R:V154 13.70556.54YesYes057
35R:R:R153 R:R:R73 33.820110.66NoYes055
36R:R:I158 R:R:V154 12.20773.07NoYes077
37R:R:L81 R:R:N294 21.67344.12NoYes099
38L:L:?1 R:R:F119 11.080910.1YesYes205
39R:R:P172 R:R:Y196 15.14722.25YesYes056
40R:R:I203 R:R:I207 13.98722.94NoNo057
41L:L:?1 R:R:I203 15.33484.31YesNo005
42R:R:R136 R:R:Y215 21.20395.14YesYes099
43R:R:K150 R:R:R153 27.89469.9NoNo075
44R:R:K142 R:R:K150 21.62641.44NoNo057
45R:R:I197 R:R:I201 19.3682.94NoNo064
46L:L:?1 R:R:I201 26.97443.23YesNo004
47R:R:D266 R:R:S186 16.72465.89YesNo045
48R:R:I197 R:R:S186 17.36783.1NoNo065
49R:R:F204 R:R:F260 18.12387.5NoYes076
50R:R:V245 R:R:Y215 13.39095.05NoYes089
51R:R:L241 R:R:V245 12.18422.98NoNo088
52R:R:F260 R:R:I261 18.77643.77YesNo064
53R:R:I261 R:R:I265 16.94062.94NoNo044
54R:R:D85 R:R:L81 14.93579.5YesNo099
55R:R:F204 R:R:W256 10.43768.02NoYes278
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:M118 R:R:Y92 9.58 0 Yes Yes 6 6 1 2
R:R:I284 R:R:Y92 6.04 0 No Yes 5 6 2 2
R:R:M118 R:R:N95 8.41 0 Yes No 6 6 1 2
L:L:?1 R:R:M118 4.27 2 Yes Yes 0 6 0 1
R:R:F119 R:R:Y196 9.28 2 Yes Yes 5 6 1 2
R:R:C200 R:R:F119 4.19 2 Yes Yes 6 5 1 1
L:L:?1 R:R:F119 10.1 2 Yes Yes 0 5 0 1
L:L:?1 R:R:L122 11.48 2 Yes No 0 6 0 1
L:L:?1 R:R:G123 3.87 2 Yes No 0 5 0 1
R:R:T126 R:R:W256 4.85 2 No Yes 7 8 1 1
L:L:?1 R:R:T126 3.34 2 Yes No 0 7 0 1
R:R:L168 R:R:Y196 5.86 2 No Yes 5 6 1 2
R:R:C200 R:R:L168 4.76 2 Yes No 6 5 1 1
L:L:?1 R:R:L168 3.13 2 Yes No 0 5 0 1
R:R:C200 R:R:Y196 6.72 2 Yes Yes 6 6 1 2
R:R:I197 R:R:I201 2.94 0 No No 6 4 2 1
L:L:?1 R:R:C200 7.18 2 Yes Yes 0 6 0 1
R:R:F260 R:R:I201 3.77 0 Yes No 6 4 2 1
L:L:?1 R:R:I201 3.23 2 Yes No 0 4 0 1
R:R:I203 R:R:I207 2.94 0 No No 5 7 1 2
L:L:?1 R:R:I203 4.31 2 Yes No 0 5 0 1
R:R:F204 R:R:W256 8.02 2 No Yes 7 8 1 1
R:R:F204 R:R:F260 7.5 2 No Yes 7 6 1 2
L:L:?1 R:R:F204 11.02 2 Yes No 0 7 0 1
R:R:F252 R:R:W256 8.02 0 No Yes 9 8 2 1
R:R:N290 R:R:W256 12.43 0 No Yes 9 8 2 1
L:L:?1 R:R:W256 6.01 2 Yes Yes 0 8 0 1
R:R:F263 R:R:L259 10.96 2 No Yes 6 6 1 1
R:R:I284 R:R:L259 4.28 0 No Yes 5 6 2 1
L:L:?1 R:R:L259 5.22 2 Yes Yes 0 6 0 1
L:L:?1 R:R:F263 12.86 2 Yes No 0 6 0 1
R:R:A287 R:R:L259 1.58 0 No Yes 7 6 2 1
R:R:M118 R:R:S117 1.53 0 Yes No 6 4 1 2
R:R:F119 R:R:G116 1.51 2 Yes No 5 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7EW4_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.94
Number of Linked Nodes 262
Number of Links 290
Number of Hubs 40
Number of Links mediated by Hubs 154
Number of Communities 10
Number of Nodes involved in Communities 56
Number of Links involved in Communities 71
Path Summary
Number Of Nodes in MetaPath 56
Number Of Links MetaPath 55
Number of Shortest Paths 42198
Length Of Smallest Path 3
Average Path Length 12.2787
Length of Longest Path 29
Minimum Path Strength 1.265
Average Path Strength 5.79324
Maximum Path Strength 15.765
Minimum Path Correlation 0.7
Average Path Correlation 0.920144
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 47.4043
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.0825
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeJF9
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeJF9
NameN,N-dicyclohexyl-5-cyclopropyl-1,2-oxazole-3-carboxamide
Synonyms
Identifier
FormulaC19 H28 N2 O2
Molecular Weight316.438
SMILES
PubChem17253208
Formal Charge0
Total Atoms51
Total Chiral Atoms0
Total Bonds54
Total Aromatic Bonds5

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ99500
Sequence
>7EW4_nogp_Chain_R
ETLREHYQY VGKLSTLTT VLFLVICSF IVLENLMVL IAIWKNNKF 
HNRMYFFIG NLALCDLLA GIAYKVNIL MSGKKTFSL SPTVWFLRE 
GSMFVALGA STCSLLAIA IERHLTMIK MRPYDANKR HRVFLLIGM 
CWLIAFTLG ALPILGWNC LHNLPDCST ILPLYSKKY IAFCISIFT 
AILVTIVIL YARIYFLVK SSSRKVANH NNSERSMAL LRTVVIVVS 
VFIACWSPL FILFLIDVA CRVQACPIL FKAQWFIVL AVLNSAMNP 
VIYTLASKE MRRAFFRL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7EW2ALipidLysophospholipidS1P3Homo sapiensFingolimod-Gi1/β1/γ23.12021-09-29doi.org/10.1038/s41422-021-00567-w
7EW2 (No Gprot) ALipidLysophospholipidS1P3Homo sapiensFingolimod-3.12021-09-29doi.org/10.1038/s41422-021-00567-w
7EW3ALipidLysophospholipidS1P3Homo sapiensS1P-Gi1/β1/γ23.12021-09-29doi.org/10.1038/s41422-021-00567-w
7EW3 (No Gprot) ALipidLysophospholipidS1P3Homo sapiensS1P-3.12021-09-29doi.org/10.1038/s41422-021-00567-w
7EW4ALipidLysophospholipidS1P3Homo sapiensCYM5541-Gi1/β1/γ23.22021-09-29doi.org/10.1038/s41422-021-00567-w
7EW4 (No Gprot) ALipidLysophospholipidS1P3Homo sapiensCYM5541-3.22021-09-29doi.org/10.1038/s41422-021-00567-w
7C4SALipidLysophospholipidS1P3Homo sapiensS1P--3.22021-06-09doi.org/10.1126/sciadv.abf5325




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7EW4_nogp.zip



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