Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F25 2.8525405
2R:R:G36 2.6225408
3R:R:N37 5.4675409
4R:R:L62 5.984519
5R:R:D66 7.826519
6R:R:M74 5.35417
7R:R:W86 6.40333647
8R:R:Y88 7.9175446
9R:R:F92 7.615446
10R:R:D100 7.978517
11R:R:L102 5.5675426
12R:R:T105 6.09426
13R:R:H110 8.578518
14R:R:L111 7.2125418
15R:R:C112 4.14408
16R:R:D117 7.542538
17R:R:Y119 7.8825408
18R:R:Y120 6.415454
19R:R:Q125 5.1456
20R:R:Y129 9.175437
21R:R:M133 6.14437
22R:R:I138 4.1025407
23R:R:P149 4.4975428
24R:R:F154 7.146524
25R:R:N162 6.77405
26R:R:I166 5.3625402
27R:R:K174 8.21473
28R:R:F186 6.3625414
29R:R:V188 4.93514
30R:R:N189 5.955404
31R:R:Y192 7.388507
32R:R:F201 9.34508
33R:R:M208 5.026518
34R:R:Y212 4.71167619
35R:R:F268 5.6075419
36R:R:W272 7.96857718
37R:R:F276 9.395407
38R:R:N279 6.4325415
39R:R:Y287 6.14403
40R:R:V289 4.652514
41R:R:W294 9.664514
42R:R:F297 5.63506
43R:R:W299 11.7675416
44R:R:Y302 10.086517
45R:R:N304 9.79419
46R:R:N308 10.2225419
47R:R:Y312 6.01419
48R:R:F319 6.785608
49L:L:?1 9.00625810
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:D100 R:R:Y302 10.267210.34YesYes177
2R:R:D100 R:R:T104 21.45074.34YesNo177
3R:R:T104 R:R:W272 59.88228.49NoYes178
4R:R:N304 R:R:W272 10014.69YesYes198
5R:R:N304 R:R:N308 56.123110.9YesYes199
6R:R:D66 R:R:N308 12.182110.77YesYes199
7R:R:D66 R:R:N37 11.74456.73YesYes099
8R:R:L111 R:R:N304 46.48274.12YesYes189
9R:R:L111 R:R:L62 49.4395.54YesYes189
10R:R:H110 R:R:L62 98.94226.43YesYes189
11R:R:H110 R:R:S61 93.052711.16YesNo189
12R:R:L142 R:R:S61 92.38973NoNo079
13R:R:I138 R:R:L142 91.44052.85YesNo077
14R:R:F58 R:R:I138 21.91796.28NoYes087
15R:R:D117 R:R:F58 19.762811.94YesNo388
16R:R:D117 R:R:T55 37.94954.34YesNo388
17R:R:I53 R:R:T55 53.93183.04NoNo058
18R:R:I53 R:R:N56 50.58575.66NoNo059
19R:R:F319 R:R:N56 27.07046.04YesNo089
20R:R:L62 R:R:N308 44.6328.24YesYes199
21R:R:I138 R:R:M133 66.73254.37YesYes077
22R:R:D117 R:R:M133 20.486.93YesYes387
23R:R:M133 R:R:Y129 21.534610.78YesYes377
24R:R:T55 R:R:Y129 19.32356.24NoYes387
25R:R:D47 R:R:L50 13.560713.57NoNo068
26R:R:L50 R:R:N56 20.32218.24NoNo089
27R:R:D100 R:R:R96 18.8819.53YesNo075
28R:R:R96 R:R:W86 16.44954NoYes057
29R:R:S153 R:R:V101 23.38043.23NoNo075
30L:L:?1 R:R:V101 24.457915.2YesNo005
31R:R:L102 R:R:S153 15.60727.51YesNo267
32R:R:L102 R:R:P149 11.31023.28YesYes268
33R:R:F268 R:R:W272 14.53626.01YesYes198
34R:R:F268 R:R:M208 15.42136.22YesYes198
35R:R:M208 R:R:Y212 13.46033.59YesYes189
36R:R:C124 R:R:Y119 14.13156.72NoYes078
37R:R:C124 R:R:Y120 15.28976.72NoYes074
38R:R:R137 R:R:Y120 22.14985.14NoYes064
39R:R:M133 R:R:R137 26.67232.48YesNo076
40L:L:?1 R:R:V188 15.50693.8YesYes104
41R:R:V188 R:R:Y192 14.00326.31YesYes047
42R:R:D282 R:R:Y287 10.85285.75NoYes033
43R:R:D282 R:R:W294 13.034314.52NoYes134
44R:R:F275 R:R:W294 20.924211.02NoYes064
45L:L:?1 R:R:N279 21.43269.34YesYes105
46L:L:?1 R:R:F276 44.05137.25YesYes007
47R:R:F276 R:R:S197 11.21973.96YesNo076
48R:R:N279 R:R:S197 10.73115.96YesNo056
49R:R:L261 R:R:Y212 12.1415.86NoYes089
50R:R:L261 R:R:Y216 11.05353.52NoNo086
51R:R:F297 R:R:T278 13.10997.78YesNo064
52R:R:T278 R:R:W294 15.564412.13NoYes144
53R:R:V289 R:R:W294 20.48996.13YesYes144
54R:R:P290 R:R:V289 10.38733.53NoYes044
55L:L:?1 R:R:T104 38.219315.04YesNo107
56R:R:F276 R:R:W272 51.56126.01YesYes078
57R:R:Y212 R:R:Y312 10.58633.97YesYes199
58L:L:?1 R:R:F275 22.15488.29YesNo006
59R:R:N279 R:R:W294 30.42644.52YesYes154
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D100 R:R:V73 8.76 1 Yes No 7 7 1 2
R:R:V73 R:R:Y302 5.05 1 No Yes 7 7 2 2
R:R:D100 R:R:R96 9.53 1 Yes No 7 5 1 2
R:R:F186 R:R:T97 10.38 1 Yes No 4 4 1 2
R:R:D100 R:R:T104 4.34 1 Yes No 7 7 1 1
R:R:D100 R:R:Y302 10.34 1 Yes Yes 7 7 1 2
L:L:?1 R:R:D100 6.92 1 Yes Yes 0 7 0 1
R:R:S153 R:R:V101 3.23 2 No No 7 5 2 1
L:L:?1 R:R:V101 15.2 1 Yes No 0 5 0 1
R:R:T104 R:R:W272 8.49 1 No Yes 7 8 1 2
L:L:?1 R:R:T104 15.04 1 Yes No 0 7 0 1
R:R:F186 R:R:N162 3.62 1 Yes Yes 4 5 1 2
R:R:N162 R:R:Y192 8.14 0 Yes Yes 5 7 2 2
R:R:F186 R:R:V188 5.24 1 Yes Yes 4 4 1 1
L:L:?1 R:R:F186 6.21 1 Yes Yes 0 4 0 1
R:R:V188 R:R:Y192 6.31 1 Yes Yes 4 7 1 2
R:R:A193 R:R:V188 3.39 0 No Yes 5 4 2 1
R:R:N279 R:R:V188 5.91 1 Yes Yes 5 4 1 1
L:L:?1 R:R:V188 3.8 1 Yes Yes 0 4 0 1
R:R:F276 R:R:S197 3.96 0 Yes No 7 6 1 2
R:R:N279 R:R:S197 5.96 1 Yes No 5 6 1 2
R:R:F201 R:R:F276 20.36 0 Yes Yes 8 7 2 1
R:R:F276 R:R:W272 6.01 0 Yes Yes 7 8 1 2
R:R:F275 R:R:W294 11.02 0 No Yes 6 4 1 2
R:R:F275 R:R:L298 6.09 0 No No 6 5 1 2
L:L:?1 R:R:F275 8.29 1 Yes No 0 6 0 1
L:L:?1 R:R:F276 7.25 1 Yes Yes 0 7 0 1
R:R:N279 R:R:W294 4.52 1 Yes Yes 5 4 1 2
L:L:?1 R:R:N279 9.34 1 Yes Yes 0 5 0 1
R:R:L298 R:R:Y302 12.89 0 No Yes 5 7 2 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7XT9_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.23
Number of Linked Nodes 272
Number of Links 307
Number of Hubs 49
Number of Links mediated by Hubs 174
Number of Communities 7
Number of Nodes involved in Communities 63
Number of Links involved in Communities 87
Path Summary
Number Of Nodes in MetaPath 60
Number Of Links MetaPath 59
Number of Shortest Paths 99858
Length Of Smallest Path 3
Average Path Length 15.4508
Length of Longest Path 31
Minimum Path Strength 1.26
Average Path Strength 6.90422
Maximum Path Strength 18.93
Minimum Path Correlation 0.7
Average Path Correlation 0.942044
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.7037
Average % Of Corr. Nodes 54.7597
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 56.0467
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • molecular function activator activity   • phosphorus-oxygen lyase activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activator activity   • adenylate cyclase activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • protein localization   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • localization   • cellular macromolecule localization   • regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • protein transport   • regulation of cellular localization   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • neurotransmitter receptor activity   • molecular transducer activity   • signaling receptor activity   • serotonin receptor activity   • transmembrane signaling receptor activity   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • G protein-coupled receptor activity   • electron transport chain   • metabolic process   • generation of precursor metabolites and energy   • maintenance of gastrointestinal epithelium   • digestion   • multicellular organismal-level homeostasis   • epithelial structure maintenance   • homeostatic process   • digestive system process   • anatomical structure homeostasis   • tissue homeostasis   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • regulation of body fluid levels   • secretion by tissue   • secretion   • transport   • mucus secretion   • establishment of localization   • body fluid secretion   • localization   • regulation of biological quality   • large intestinal transit   • intestinal motility   • serotonin receptor signaling pathway   • adenylate cyclase-activating serotonin receptor signaling pathway   • regulation of cellular component organization   • cellular component organization   • cellular component biogenesis   • cellular component assembly   • regulation of postsynapse assembly   • cell junction assembly   • regulation of synapse structure or activity   • synapse organization   • cellular component organization or biogenesis   • regulation of synapse assembly   • postsynapse organization   • postsynapse assembly   • regulation of postsynapse organization   • nervous system development   • regulation of cellular component biogenesis   • regulation of cell junction assembly   • regulation of synapse organization   • cell junction organization   • synapse assembly   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • response to nutrient levels   • regulation of appetite   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • periplasmic space   • somatodendritic compartment   • dendrite   • dendritic tree   • glutamatergic synapse   • endosome membrane   • endosome   • intracellular vesicle   • cytoplasmic vesicle membrane   • vesicle membrane   • cytoplasmic vesicle   • postsynapse
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeSRO
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeSRO
NameSerotonin
SynonymsSerotonin
Identifier
FormulaC10 H12 N2 O
Molecular Weight176.215
SMILES
PubChem5202
Formal Charge0
Total Atoms25
Total Chiral Atoms0
Total Bonds26
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13639
Sequence
>7XT9_nogp_Chain_R
KVVLLTFLS TVILMAILG NLLVMVAVC WDRQLRKIK TNYFIVSLA 
FADLLVSVL VMPFGAIEL VQDIWIYGE VFCLVRTSL DVLLTTASI 
FHLCCISLD RYYAICCQP LVYRNKMTP LRIALMLGG CWVIPTFIS 
FLPIMQGWN NIGIIDLIE KRKFNQNSN STYCVFMVN KPYAITCSV 
VAFYIPFLL MVLAYYRIY VTAKEHAHQ IQMLQRAGA SSETKAAKT 
LCIIMGCFC LCWAPFFVT NIVDPFIDY TVPGQVWTA FLWLGYINS 
GLNPFLYAF LNKSFRRAF LIILCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XTAAAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gi1/β1/γ23.22022-07-2710.1016/j.molcel.2022.05.031
7XTA (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.22022-07-2710.1016/j.molcel.2022.05.031
7XT9AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gs/β1/γ23.22022-07-2710.1016/j.molcel.2022.05.031
7XT9 (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.22022-07-2710.1016/j.molcel.2022.05.031
7XT8AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gs/β1/γ23.12022-07-2710.1016/j.molcel.2022.05.031
7XT8 (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.12022-07-2710.1016/j.molcel.2022.05.031




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7XT9_nogp.zip



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