Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:D47 9.13436
2R:R:Q49 5.58437
3R:R:L50 8.2875438
4R:R:F58 5.4528
5R:R:L62 5.966519
6R:R:D66 7.262519
7R:R:V69 5.075408
8R:R:M74 6.9625417
9R:R:W86 7.07647
10R:R:F92 7.4325446
11R:R:D100 7.5125417
12R:R:L102 5.5675456
13R:R:T105 5.46406
14R:R:H110 8.34167618
15R:R:C112 4.2075418
16R:R:Y119 4.05408
17R:R:Y120 4.386524
18R:R:Y129 7.085627
19R:R:M133 6.0625427
20R:R:F154 7.432554
21R:R:N163 5.955465
22R:R:M187 5.2325403
23R:R:V188 4.12514
24R:R:N189 5.4925404
25R:R:Y192 5.7607
26R:R:F201 8.7825418
27R:R:M208 5.772518
28R:R:Y212 5.13519
29R:R:F268 5.75519
30R:R:W272 7.2718
31R:R:T278 5.325414
32R:R:N279 6.94415
33R:R:D282 7.1575413
34R:R:W294 5.31614
35R:R:F297 6.39406
36R:R:W299 7.184516
37R:R:Y302 10.828517
38R:R:N308 7.83419
39R:R:P309 2.5325409
40R:R:Y312 4.9175409
41R:R:F319 6.31738
42L:L:?1 9.31875810
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:C267 R:R:L307 12.13734.76NoNo056
2R:R:C267 R:R:L311 15.15646.35NoNo058
3R:R:I264 R:R:L311 27.2012.85NoNo088
4R:R:I264 R:R:Y312 36.08634.84NoYes089
5R:R:L111 R:R:Y312 22.33434.69NoYes089
6R:R:D66 R:R:L62 10.62895.43YesYes199
7R:R:D66 R:R:S305 32.470210.31YesNo099
8R:R:S305 R:R:V69 34.17996.46NoYes098
9R:R:L111 R:R:N308 19.15698.24NoYes189
10R:R:D66 R:R:N308 46.3339.42YesYes199
11R:R:I326 R:R:W46 10.07262.35NoNo076
12R:R:I325 R:R:W46 12.0742.35NoNo046
13R:R:I325 R:R:R321 14.07096.26NoNo045
14R:R:D47 R:R:R321 16.00913.1YesNo365
15R:R:D47 R:R:L50 27.922413.57YesYes368
16R:R:F319 R:R:L50 31.651610.96YesYes388
17R:R:F319 R:R:F323 54.67333.22YesNo087
18R:R:F323 R:R:V40 58.36182.62NoNo079
19R:R:P309 R:R:V40 62.13171.77YesNo099
20R:R:N37 R:R:P309 67.74244.89NoYes099
21R:R:D66 R:R:N37 73.31246.73YesNo099
22R:R:D117 R:R:Y129 29.209210.34NoYes287
23R:R:D117 R:R:F58 31.81667.17NoYes288
24R:R:F58 R:R:I114 39.15963.77YesNo089
25R:R:I114 R:R:L62 38.74134.28NoYes099
26R:R:D100 R:R:Y302 10.382411.49YesYes177
27R:R:F92 R:R:V95 17.17143.93YesNo065
28R:R:L99 R:R:V95 19.39662.98NoNo055
29R:R:F154 R:R:L99 20.50252.44YesNo045
30R:R:F154 R:R:S153 24.03276.61YesNo547
31R:R:S153 R:R:V101 33.16673.23NoNo075
32L:L:?1 R:R:V101 31.013812.67YesNo005
33L:L:?1 R:R:D100 34.69556.92YesYes107
34R:R:K174 R:R:V185 22.83863.04NoNo033
35R:R:V185 R:R:Y183 28.53755.05NoNo034
36R:R:R173 R:R:Y183 33.8188.23NoNo034
37R:R:M187 R:R:R173 62.17922.48YesNo033
38R:R:I170 R:R:M187 52.78055.83NoYes043
39R:R:I170 R:R:N163 28.31597.08NoYes045
40R:R:N162 R:R:N163 33.779613.62NoYes655
41R:R:N162 R:R:Y192 37.52014.65NoYes057
42R:R:V188 R:R:Y192 57.10445.05YesYes047
43L:L:?1 R:R:V188 57.06373.8YesYes104
44R:R:I166 R:R:I170 28.36565.89NoNo024
45R:R:I166 R:R:N189 60.11674.25NoYes024
46R:R:N189 R:R:Y192 70.98533.49YesYes047
47R:R:M187 R:R:Y287 26.44118.38YesNo033
48R:R:I166 R:R:Y287 29.98946.04NoNo023
49R:R:C196 R:R:Y192 56.00089.41NoYes057
50L:L:?1 R:R:C196 68.80756.75YesNo005
51R:R:C196 R:R:I152 16.53814.91NoNo055
52R:R:I152 R:R:T105 13.45127.6NoYes056
53R:R:T104 R:R:W272 68.22867.28NoYes178
54R:R:F268 R:R:W272 29.56655.01YesYes198
55R:R:F268 R:R:M208 40.8499.95YesYes198
56R:R:M208 R:R:Y212 32.64213.59YesYes189
57R:R:Y120 R:R:Y129 17.3933.97YesYes247
58R:R:L169 R:R:M187 11.42724.24NoYes013
59R:R:N176 R:R:R173 22.83866.03NoNo053
60R:R:F175 R:R:K174 11.42721.24NoNo013
61R:R:N176 R:R:N178 11.42721.36NoNo053
62L:L:?1 R:R:N279 18.288512.85YesYes105
63R:R:F201 R:R:F276 16.850221.43YesNo087
64L:L:?1 R:R:F276 82.76319.32YesNo007
65R:R:N304 R:R:W272 10014.69NoYes198
66R:R:F297 R:R:T278 16.03389.08YesYes064
67R:R:T278 R:R:W294 20.47544.85YesYes144
68R:R:F275 R:R:W294 21.39585.01NoYes064
69R:R:V69 R:R:V73 28.17574.81YesNo087
70R:R:Y212 R:R:Y312 27.32543.97YesYes099
71R:R:N304 R:R:N308 99.37818.17NoYes199
72L:L:?1 R:R:T104 66.55288.77YesNo107
73R:R:F276 R:R:W272 66.97574.01NoYes078
74R:R:F201 R:R:F268 14.38754.29YesYes189
75L:L:?1 R:R:F275 18.290813.47YesNo006
76R:R:N279 R:R:W294 19.23834.52YesYes154
77R:R:D100 R:R:V73 25.79217.3YesNo177
78R:R:L62 R:R:N308 41.07065.49YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D100 R:R:V73 7.3 1 Yes No 7 7 1 2
R:R:V73 R:R:Y302 5.05 1 No Yes 7 7 2 2
R:R:D100 R:R:T104 4.34 1 Yes No 7 7 1 1
R:R:D100 R:R:Y302 11.49 1 Yes Yes 7 7 1 2
L:L:?1 R:R:D100 6.92 1 Yes Yes 0 7 0 1
R:R:S153 R:R:V101 3.23 5 No No 7 5 2 1
R:R:I157 R:R:V101 4.61 0 No No 5 5 2 1
L:L:?1 R:R:V101 12.67 1 Yes No 0 5 0 1
R:R:T104 R:R:W272 7.28 1 No Yes 7 8 1 2
L:L:?1 R:R:T104 8.77 1 Yes No 0 7 0 1
R:R:C196 R:R:I152 4.91 0 No No 5 5 1 2
R:R:F186 R:R:I157 5.02 0 No No 4 5 2 2
R:R:I157 R:R:Y192 6.04 0 No Yes 5 7 2 2
R:R:F186 R:R:V188 3.93 0 No Yes 4 4 2 1
R:R:V188 R:R:Y192 5.05 1 Yes Yes 4 7 1 2
R:R:A193 R:R:V188 3.39 0 No Yes 5 4 2 1
R:R:N279 R:R:V188 4.43 1 Yes Yes 5 4 1 1
L:L:?1 R:R:V188 3.8 1 Yes Yes 0 4 0 1
R:R:C196 R:R:Y192 9.41 0 No Yes 5 7 1 2
L:L:?1 R:R:C196 6.75 1 Yes No 0 5 0 1
R:R:N279 R:R:S197 5.96 1 Yes No 5 6 1 2
R:R:F201 R:R:F276 21.43 1 Yes No 8 7 2 1
R:R:F276 R:R:W272 4.01 0 No Yes 7 8 1 2
R:R:F275 R:R:W294 5.01 0 No Yes 6 4 1 2
R:R:F275 R:R:L298 4.87 0 No No 6 5 1 2
L:L:?1 R:R:F275 13.47 1 Yes No 0 6 0 1
L:L:?1 R:R:F276 9.32 1 Yes No 0 7 0 1
R:R:N279 R:R:W294 4.52 1 Yes Yes 5 4 1 2
L:L:?1 R:R:N279 12.85 1 Yes Yes 0 5 0 1
R:R:L298 R:R:Y302 15.24 0 No Yes 5 7 2 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7XTA_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.22
Number of Linked Nodes 258
Number of Links 298
Number of Hubs 42
Number of Links mediated by Hubs 165
Number of Communities 6
Number of Nodes involved in Communities 58
Number of Links involved in Communities 78
Path Summary
Number Of Nodes in MetaPath 79
Number Of Links MetaPath 78
Number of Shortest Paths 107710
Length Of Smallest Path 3
Average Path Length 15.0534
Length of Longest Path 32
Minimum Path Strength 1.265
Average Path Strength 6.36065
Maximum Path Strength 15.375
Minimum Path Correlation 0.7
Average Path Correlation 0.92955
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 47.0023
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.5839
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • tetrapyrrole binding   • heme binding   • electron transfer activity   • cation binding   • transition metal ion binding   • iron ion binding   • ion binding   • metal ion binding   • small molecule binding   • serotonin binding   • amine binding   • heterocyclic compound binding   • neurotransmitter receptor activity   • molecular transducer activity   • signaling receptor activity   • serotonin receptor activity   • transmembrane signaling receptor activity   • G protein-coupled amine receptor activity   • G protein-coupled serotonin receptor activity   • G protein-coupled receptor activity   • electron transport chain   • metabolic process   • generation of precursor metabolites and energy   • maintenance of gastrointestinal epithelium   • digestion   • multicellular organismal-level homeostasis   • epithelial structure maintenance   • homeostatic process   • digestive system process   • anatomical structure homeostasis   • tissue homeostasis   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • regulation of body fluid levels   • secretion by tissue   • secretion   • transport   • mucus secretion   • establishment of localization   • body fluid secretion   • localization   • regulation of biological quality   • large intestinal transit   • intestinal motility   • serotonin receptor signaling pathway   • adenylate cyclase-activating serotonin receptor signaling pathway   • regulation of cellular component organization   • cellular component organization   • cellular component biogenesis   • cellular component assembly   • regulation of postsynapse assembly   • cell junction assembly   • regulation of synapse structure or activity   • synapse organization   • cellular component organization or biogenesis   • regulation of synapse assembly   • postsynapse organization   • postsynapse assembly   • regulation of postsynapse organization   • nervous system development   • regulation of cellular component biogenesis   • regulation of cell junction assembly   • regulation of synapse organization   • cell junction organization   • synapse assembly   • trans-synaptic signaling   • anterograde trans-synaptic signaling   • chemical synaptic transmission   • response to nutrient levels   • regulation of appetite   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • periplasmic space   • somatodendritic compartment   • dendrite   • dendritic tree   • glutamatergic synapse   • endosome membrane   • endosome   • intracellular vesicle   • cytoplasmic vesicle membrane   • vesicle membrane   • cytoplasmic vesicle   • postsynapse
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeSRO
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeSRO
NameSerotonin
SynonymsSerotonin
Identifier
FormulaC10 H12 N2 O
Molecular Weight176.215
SMILES
PubChem5202
Formal Charge0
Total Atoms25
Total Chiral Atoms0
Total Bonds26
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13639
Sequence
>7XTA_nogp_Chain_R
KVVLLTFLS TVILMAILG NLLVMVAVC WDRQLRKIK TNYFIVSLA 
FADLLVSVL VMPFGAIEL VQDIWIYGE VFCLVRTSL DVLLTTASI 
FHLCCISLD RYYAICCQP LVYRNKMTP LRIALMLGG CWVIPTFIS 
FLPIMQGWN NIGIIDLIE KRKFNQNSN STYCVFMVN KPYAITCSV 
VAFYIPFLL MVLAYYRIY VTAKEHAHQ ITKAAKTLC IIMGCFCLC 
WAPFFVTNI VDPFIDYTV PGQVWTAFL WLGYINSGL NPFLYAFLN 
KSFRRAFLI ILCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XTAAAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gi1/β1/γ23.22022-07-2710.1016/j.molcel.2022.05.031
7XTA (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.22022-07-2710.1016/j.molcel.2022.05.031
7XT9AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gs/β1/γ23.22022-07-2710.1016/j.molcel.2022.05.031
7XT9 (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.22022-07-2710.1016/j.molcel.2022.05.031
7XT8AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-Gs/β1/γ23.12022-07-2710.1016/j.molcel.2022.05.031
7XT8 (No Gprot) AAmine5-Hydroxytryptamine5-HT4Homo sapiensSerotonin-3.12022-07-2710.1016/j.molcel.2022.05.031




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7XTA_nogp.zip



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