Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 6.76556940
2R:R:I19 4.038510
3R:R:P20 3.515410
4R:R:V25 3.6125400
5R:R:Y37 6.39400
6R:R:N44 3.62400
7R:R:E54 3.735400
8R:R:L57 5.645450
9R:R:Y62 5.87550
10R:R:T79 4.2425410
11R:R:I80 4.646500
12R:R:F87 7.9400
13R:R:F96 5.41620
14R:R:I106 3.1275410
15R:R:M112 5.3325400
16R:R:E113 5.638500
17R:R:Y125 5.065400
18R:R:Y134 4.696560
19R:R:L168 2.6075400
20R:R:F170 4.24420
21R:R:H178 6.342510
22R:R:Y180 5.31667610
23R:R:H183 11.65440
24R:R:M184 3.175400
25R:R:Y200 6.9625400
26R:R:I208 3.795400
27R:R:V209 4.4575400
28R:R:D212 5.35400
29R:R:Y220 5.4125400
30R:R:F253 6.5475400
31R:R:Y254 5.68833600
32R:R:H264 7.486510
33R:R:R265 6.7275400
34R:R:P271 4.4925430
35R:R:I276 6.0725410
36R:R:Y282 4.844510
37R:R:N290 4.2825400
38R:R:Y294 6.595400
39R:R:I301 3.222500
40R:R:R304 8.23400
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:I208 39.48174.07YesYes000
2R:R:I208 R:R:V209 39.36993.07YesYes000
3R:R:V209 R:R:Y254 41.94035.05YesYes000
4R:R:F253 R:R:Y254 71.64610.32YesYes000
5R:R:F253 R:R:Y282 1003.09YesYes000
6R:R:Y180 R:R:Y282 85.30682.98YesYes100
7R:R:I106 R:R:Y180 26.12953.63YesYes100
8R:R:I106 R:R:Q102 25.37922.74YesNo000
9R:R:C181 R:R:Q102 23.84654.58NoNo000
10R:R:C181 R:R:V186 20.70141.71NoNo200
11R:R:F170 R:R:V186 19.31242.62YesNo200
12R:R:F170 R:R:F96 11.23413.22YesYes200
13L:L:?1 R:R:R265 33.2348.09YesYes000
14R:R:I198 R:R:R265 33.35648.77NoYes000
15R:R:I198 R:R:M184 34.61762.92NoYes000
16R:R:H264 R:R:M184 47.87935.25YesYes000
17R:R:H178 R:R:H264 41.09414.78YesYes100
18R:R:H178 R:R:Y180 68.91069.8YesYes100
19R:R:H178 R:R:I276 48.56589.28YesYes100
20R:R:I276 R:R:P20 32.89346.77YesYes100
21R:R:P177 R:R:P20 21.44111.95NoYes000
22R:R:I176 R:R:P177 19.69561.69NoNo000
23R:R:I176 R:R:L16 16.37495.71NoNo000
24R:R:I94 R:R:L16 14.59742.85NoNo000
25R:R:A98 R:R:I94 12.80933.25NoNo000
26R:R:H264 R:R:H275 17.51913.14YesNo000
27R:R:H275 R:R:I276 17.10935.3NoYes000
28R:R:N280 R:R:Y180 17.48186.98NoYes000
29R:R:N280 R:R:T179 16.10355.85NoNo000
30R:R:G18 R:R:T179 11.17021.82NoNo000
31R:R:I19 R:R:I276 21.99462.94YesYes100
32R:R:I19 R:R:L22 15.06045.71YesNo000
33R:R:H26 R:R:I19 11.60665.3NoYes000
34R:R:T79 R:R:Y180 23.07494.99YesYes100
35R:R:I80 R:R:T79 36.52283.04YesYes000
36R:R:I80 R:R:L284 17.13594.28YesNo000
37R:R:L284 R:R:M36 13.16595.65NoNo000
38R:R:L283 R:R:Y282 14.15575.86NoYes100
39R:R:L283 R:R:T79 13.50655.9NoYes100
40R:R:I80 R:R:L84 15.00192.85YesNo000
41R:R:L84 R:R:W88 12.52736.83NoNo000
42R:R:F253 R:R:P286 10.19645.78YesNo000
43R:R:E113 R:R:F253 87.19077YesYes000
44R:R:D72 R:R:E113 27.51329.09NoYes000
45R:R:D72 R:R:N44 13.29894.04NoYes000
46R:R:D72 R:R:N290 14.07066.73NoYes000
47R:R:E113 R:R:L68 70.13463.98YesNo000
48R:R:L68 R:R:V116 67.99535.96NoNo000
49R:R:M120 R:R:V116 65.81343.04NoNo000
50R:R:F64 R:R:M120 64.69593.73NoNo000
51R:R:D123 R:R:F64 56.61227.17NoNo000
52R:R:D123 R:R:Y134 47.07579.2NoYes600
53R:R:P60 R:R:Y134 44.18074.17NoYes000
54R:R:E59 R:R:P60 36.30993.14NoNo000
55R:R:E59 R:R:Y62 34.94767.86NoYes000
56R:R:I301 R:R:Y62 12.00043.63YesYes000
57R:R:L57 R:R:Y62 18.13637.03YesYes500
58R:R:I216 R:R:Y254 37.10822.42NoYes000
59R:R:I216 R:R:Y220 22.50012.42NoYes000
60L:L:?1 R:R:H107 27.215212.23YesNo000
61R:R:H107 R:R:V158 23.6232.77NoNo000
62R:R:S108 R:R:V158 21.71254.85NoNo000
63R:R:F104 R:R:S108 19.79146.61NoNo000
64R:R:F104 R:R:F105 17.85965.36NoNo000
65R:R:F105 R:R:F109 15.91723.22NoNo000
66R:R:F109 R:R:M112 12.00047.46NoYes000
67R:R:A121 R:R:I216 16.06621.62NoNo000
68R:R:A121 R:R:S219 14.50693.42NoNo000
69R:R:S219 R:R:Y125 12.9375.09NoYes000
70L:L:?1 R:R:F161 13.60235.79YesNo400
71R:R:F161 R:R:Y200 11.93666.19NoYes000
72R:R:I194 R:R:M184 21.70722.92NoYes000
73R:R:I194 R:R:L168 14.642.85NoYes000
74R:R:P20 R:R:P272 14.00671.95YesNo000
75R:R:P271 R:R:P272 12.26651.95YesNo000
76R:R:C243 R:R:Y220 16.17265.38NoYes000
77R:R:C243 R:R:L224 13.13396.35NoNo000
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:H107 12.23 4 Yes No 0 0 0 1
L:L:?1 R:R:F161 5.79 4 Yes No 0 0 0 1
L:L:?1 R:R:H183 8.56 4 Yes Yes 0 0 0 1
L:L:?1 R:R:I208 4.07 4 Yes Yes 0 0 0 1
L:L:?1 R:R:F261 16.22 4 Yes No 0 0 0 1
L:L:?1 R:R:R265 8.09 4 Yes Yes 0 0 0 1
R:R:H107 R:R:M103 5.25 0 No No 0 0 1 2
R:R:H183 R:R:M103 6.57 4 Yes No 0 0 1 2
R:R:I208 R:R:R153 3.76 0 Yes No 0 0 1 2
R:R:I208 R:R:L157 4.28 0 Yes No 0 0 1 2
R:R:F161 R:R:H183 23.76 4 No Yes 0 0 1 1
R:R:F161 R:R:Y200 6.19 4 No Yes 0 0 1 2
R:R:H183 R:R:L165 7.71 4 Yes No 0 0 1 2
R:R:I198 R:R:R265 8.77 0 No Yes 0 0 2 1
R:R:L202 R:R:R265 3.64 0 No Yes 0 0 2 1
R:R:I208 R:R:V209 3.07 0 Yes Yes 0 0 1 2
R:R:F266 R:R:R265 6.41 0 No Yes 0 0 2 1
L:L:?1 R:R:T110 2.8 4 Yes No 0 0 0 1
R:R:H107 R:R:V158 2.77 0 No No 0 0 1 2
L:L:?1 R:R:G201 1.63 4 Yes No 0 0 0 1
L:L:?1 R:R:A205 1.5 4 Yes No 0 0 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8HTI_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 272
Number of Links 296
Number of Hubs 40
Number of Links mediated by Hubs 153
Number of Communities 6
Number of Nodes involved in Communities 32
Number of Links involved in Communities 40
Path Summary
Number Of Nodes in MetaPath 78
Number Of Links MetaPath 77
Number of Shortest Paths 46672
Length Of Smallest Path 3
Average Path Length 12.8729
Length of Longest Path 29
Minimum Path Strength 1.425
Average Path Strength 5.09079
Maximum Path Strength 15.735
Minimum Path Correlation 0.7
Average Path Correlation 0.925545
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 50.4635
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.8377
Maximum Path Hubs % 100

Details about the values in these tables can be found in the corresponding documentation page .
CodeOCA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeOCA
NameCaprylic acid
Synonymsn-octylic acid
Identifier
FormulaC8 H16 O2
Molecular Weight144.211
SMILES
PubChem379
Formal Charge0
Total Atoms26
Total Chiral Atoms0
Total Bonds25
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProt-
Sequence
>8HTI_nogp_Chain_R
SFHPSSFLL VGIPGLESV HIWISIPFC AMYLIALLG NSTLLFVIK 
TERSLHEPM YYFLAMLAA TDLVLSTST IPKMLAIFW FNLKEISFD 
ACLTQMFFI HSFTGMESG VLLAMAFDR YVAICYPLR YTTILTNKV 
IGKIGMAVV LRAVLLVIP FPFLLKRLP FCGTNIIPH TYCEHMGVA 
KLACADIKV NIIYGLFVA LLIVGLDVI LIALSYVLI LRAVFRLPS 
QDARLKALS TCGSHICVI LAFYTPAFF SFLTHRFGH HIPPYIHIL 
LANLYLLVP PMLNPIIYG VKTKQIRER VLKIFF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8W77O1Odorant receptorsOdorant family 52OR52CHomo sapiens---3.612023-12-2010.1038/s41467-023-43983-9
8J46O1Odorant receptorsOdorant family 52OR52CHomo sapiens---3.662023-12-2010.1038/s41467-023-43983-9
8HTIO1Odorant receptorsOdorant family 52OR52CHomo sapiensOcatnoic acid-Gs/β1/γ22.972023-12-2010.1038/s41467-023-43983-9
8HTI (No Gprot) O1Odorant receptorsOdorant family 52OR52CHomo sapiensOcatnoic acid-2.972023-12-2010.1038/s41467-023-43983-9




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Download 8HTI_nogp.zip



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