Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F14 4.54333600
2R:R:L16 3.5575430
3R:R:V17 3.77430
4R:R:I19 3.56440
5R:R:P20 2.166500
6R:R:F33 5.244520
7R:R:N44 8.135400
8R:R:P60 7.21410
9R:R:M61 4.948510
10R:R:F64 3.605610
11R:R:D72 6.525470
12R:R:I80 5.658500
13R:R:M83 11.1525420
14R:R:F87 6.344520
15R:R:W88 5.335420
16R:R:K92 5.0475430
17R:R:I94 2.46667630
18R:R:F104 4.354550
19R:R:F105 2.915400
20R:R:F109 4.81333650
21R:R:M112 5.145450
22R:R:V116 2.2725400
23R:R:M120 3.404510
24R:R:R124 3.9525400
25R:R:Y134 4.156500
26R:R:I143 4.4175410
27R:R:H178 7.5975420
28R:R:T179 6.9420
29R:R:Y180 7.488520
30R:R:H183 8.1460
31R:R:Y200 4.8475460
32R:R:I208 2.4425400
33R:R:D212 7.97410
34R:R:I216 4.765410
35R:R:Y220 6.88400
36R:R:H246 5.096510
37R:R:V249 2.5400
38R:R:Y254 4.32510
39R:R:I270 6.1475440
40R:R:P271 3.995440
41R:R:I274 5.096540
42R:R:N280 5.076520
43R:R:L284 3.7075420
44R:R:P287 5.6775470
45R:R:I293 2.9975400
46R:R:Y294 6.116510
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F14 R:R:I94 13.22272.51YesYes000
2R:R:I94 R:R:L16 11.64752.85YesYes300
3R:R:F14 R:R:I176 21.31323.77YesNo000
4R:R:I176 R:R:L16 14.15995.71NoYes000
5R:R:I176 R:R:P177 36.07163.39NoNo000
6R:R:P177 R:R:P20 37.43231.95NoYes000
7R:R:P20 R:R:V17 10.93611.77YesYes000
8R:R:I19 R:R:P20 39.75273.39YesYes000
9R:R:I19 R:R:L22 10.36024.28YesNo400
10R:R:I19 R:R:Y273 27.79473.63YesNo400
11R:R:F89 R:R:W88 10.6823.01NoYes000
12R:R:I276 R:R:P20 78.42141.69NoYes000
13R:R:H178 R:R:I276 79.18936.63YesNo000
14R:R:H178 R:R:T179 10.00454.11YesYes200
15R:R:H178 R:R:Y180 75.05089.8YesYes200
16R:R:N280 R:R:Y180 14.45912.33YesYes200
17R:R:L84 R:R:W88 12.624211.39NoYes000
18R:R:I106 R:R:Y180 85.6823.63NoYes000
19R:R:I106 R:R:L75 1004.28NoNo000
20R:R:E113 R:R:L75 35.08366.63NoNo000
21R:R:D72 R:R:E113 47.03592.6YesNo000
22R:R:D72 R:R:P287 36.56289.66YesYes700
23R:R:P286 R:R:P287 35.48445.84NoYes000
24R:R:I80 R:R:L84 15.32864.28YesNo000
25R:R:I80 R:R:Y37 13.544513.3YesNo000
26R:R:L41 R:R:Y37 10.5072.34NoNo000
27R:R:D72 R:R:N44 26.34379.42YesYes000
28R:R:N44 R:R:P291 10.24734.89YesNo000
29R:R:F109 R:R:L75 78.26338.53YesNo000
30R:R:F109 R:R:M112 84.25362.49YesYes500
31R:R:M112 R:R:V116 91.82481.52YesYes000
32R:R:M120 R:R:V116 91.50861.52YesYes000
33R:R:L65 R:R:M120 10.01584.24NoYes100
34R:R:M120 R:R:Y294 17.15223.59YesYes100
35R:R:M61 R:R:Y294 20.86164.79YesYes100
36R:R:F64 R:R:M120 55.67983.73YesYes100
37R:R:F64 R:R:P60 23.87082.89YesYes100
38R:R:P60 R:R:Y134 21.31899.74YesYes000
39R:R:D123 R:R:F64 22.5614.78NoYes000
40R:R:D123 R:R:Y134 32.37354.6NoYes000
41R:R:M61 R:R:R124 17.42323.72YesYes000
42R:R:E113 R:R:T71 14.3184.23NoNo000
43R:R:F105 R:R:F109 39.25592.14YesYes000
44R:R:I106 R:R:T79 18.68224.56NoNo000
45R:R:F104 R:R:F105 32.41314.29YesYes000
46R:R:F104 R:R:P162 54.00295.78YesNo000
47R:R:M103 R:R:P162 50.93163.35NoNo000
48R:R:F109 R:R:S108 35.84583.96YesNo500
49R:R:F104 R:R:S108 32.31142.64YesNo500
50R:R:H183 R:R:M103 43.60322.63YesNo600
51R:R:F253 R:R:P286 31.08062.89NoNo000
52R:R:F253 R:R:Y254 26.60346.19NoYes000
53R:R:D212 R:R:Y254 38.00818.05YesYes100
54R:R:D212 R:R:S114 62.83315.89YesNo000
55R:R:I208 R:R:S114 18.45641.55YesNo000
56R:R:G115 R:R:S114 42.44021.86NoNo000
57R:R:G115 R:R:V150 36.44421.84NoNo800
58R:R:V249 R:R:Y294 11.4952.52YesYes000
59R:R:H246 R:R:M120 48.0863.94YesYes100
60R:R:C129 R:R:Y125 11.68136.72NoNo000
61R:R:C129 R:R:Y130 19.41622.69NoNo000
62R:R:R133 R:R:Y130 27.10591.03NoNo000
63R:R:I137 R:R:R133 30.93382.51NoNo000
64R:R:I137 R:R:V126 34.75051.54NoNo000
65R:R:V126 R:R:Y134 38.55582.52NoYes000
66R:R:H246 R:R:Y220 20.43258.71YesYes000
67R:R:I128 R:R:R124 12.21211.25NoYes000
68R:R:G147 R:R:V150 33.53091.84NoNo000
69R:R:G147 R:R:I146 30.53863.53NoNo000
70R:R:I146 R:R:V142 27.5351.54NoNo000
71R:R:T139 R:R:V142 24.52011.59NoNo000
72R:R:K141 R:R:T139 18.45641.5NoNo000
73R:R:K141 R:R:K145 15.40761.44NoNo000
74R:R:K145 R:R:M148 12.34767.2NoNo000
75R:R:F161 R:R:H183 10.992514.71NoYes000
76R:R:H183 R:R:N197 29.782111.48YesNo600
77R:R:N197 R:R:Y200 22.3863.49NoYes600
78R:R:V196 R:R:Y200 11.25796.31NoYes000
79R:R:I216 R:R:Y220 22.9112.42YesYes000
80R:R:H246 R:R:I250 36.29186.63YesNo100
81R:R:I216 R:R:I250 17.15224.42YesNo100
82R:R:I274 R:R:Y273 19.50654.84YesNo400
83R:R:I274 R:R:L278 13.07021.43YesNo000
84R:R:L278 R:R:S260 10.01583NoNo000
85R:R:I80 R:R:T79 17.48533.04YesNo000
86R:R:I250 R:R:Y254 18.27572.42NoYes100
87R:R:D123 R:R:M61 12.58474.16NoYes000
88R:R:D212 R:R:I216 36.12819.8YesYes100
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8W77
Class O1
SubFamily Odorant receptors
Type Odorant family 52
SubType OR52C
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.61
Date 2023-12-20
D.O.I. 10.1038/s41467-023-43983-9
Net Summary
Imin 1.77
Number of Linked Nodes 231
Number of Links 271
Number of Hubs 46
Number of Links mediated by Hubs 160
Number of Communities 8
Number of Nodes involved in Communities 60
Number of Links involved in Communities 82
Path Summary
Number Of Nodes in MetaPath 89
Number Of Links MetaPath 88
Number of Shortest Paths 46580
Length Of Smallest Path 3
Average Path Length 13.8654
Length of Longest Path 34
Minimum Path Strength 1.2
Average Path Strength 4.41318
Maximum Path Strength 12.85
Minimum Path Correlation 0.7
Average Path Correlation 0.914606
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 39.5066
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 49.3394
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProt-
Sequence
>8W77_Chain_R
PSSFLLVIP GLESVHIWI SIPFCAMYL IALLGNSTL LFVIKLHEP 
MYYFLAMLA ATDLVLSTS TIPKMLAIF WFNLKEISF DACLTQMFF 
IHSFTGMES GVLLAMAFD RYVAICYPL RYTTILTNK VIGKIGMAV 
VLRAVLLVI PFPFLLKRL NIIPHTYCE HMGVAKLIK VNIIYGLFV 
ALLIVGLDV ILIALSYVL ILRALKALS TCGSHICVI LAFYTPAFF 
SFLTHRFGH HIPPYIHIL LANLYLLVP PMLNPIIY


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8W77O1Odorant receptorsOdorant family 52OR52CHomo sapiens---3.612023-12-2010.1038/s41467-023-43983-9
8J46O1Odorant receptorsOdorant family 52OR52CHomo sapiens---3.662023-12-2010.1038/s41467-023-43983-9
8HTIO1Odorant receptorsOdorant family 52OR52CHomo sapiensOcatnoic acid-Gs/β1/γ22.972023-12-2010.1038/s41467-023-43983-9
8HTI (No Gprot) O1Odorant receptorsOdorant family 52OR52CHomo sapiensOcatnoic acid-2.972023-12-2010.1038/s41467-023-43983-9




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Download 8W77.zip



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