Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 12.3513810
2L:L:?2 13.8189910
3L:L:?3 8.55810
4L:L:?4 10.4511910
5R:R:I47 4.612546
6R:R:Y51 4.7475447
7R:R:V78 5.895436
8R:R:Y82 5.775637
9R:R:D90 4.915629
10R:R:F99 5.7875415
11R:R:W109 8.36667618
12R:R:D123 5.815416
13R:R:F128 4.75167606
14R:R:Y142 5.84578
15R:R:L143 2.9525405
16R:R:R155 6.5725437
17R:R:V184 6.42464
18R:R:M193 5.84414
19R:R:W195 7.67333616
20R:R:F206 8.585415
21R:R:L219 5.1575405
22R:R:Y226 7.4775408
23R:R:W241 6.0025403
24R:R:W270 7.92508
25R:R:F273 7.81416
26R:R:Y274 5.9775408
27R:R:I278 1.8725405
28R:R:F296 6.8075444
29R:R:Y303 10.006516
30R:R:N309 6.9075429
31R:R:L312 2.135488
32R:R:Y313 5.305429
33R:R:F320 4.965408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?2 R:R:G124 10.77916.61YesNo004
2L:L:?1 L:L:?4 35.10098.1YesYes100
3L:L:?4 R:R:F273 42.12813.74YesYes106
4L:L:?1 R:R:D123 17.87956.47YesYes106
5R:R:D123 R:R:Y303 33.07614.6YesYes166
6L:L:?4 R:R:Y303 53.54018.4YesYes106
7R:R:L97 R:R:Y303 23.07369.38NoYes066
8R:R:L97 R:R:Y51 18.02575.86NoYes067
9R:R:I47 R:R:Y51 10.30016.04YesYes467
10L:L:?1 R:R:F99 17.66524.64YesYes105
11R:R:F273 R:R:Y274 61.98697.22YesYes068
12R:R:W270 R:R:Y274 61.60113.86YesYes088
13R:R:N305 R:R:W270 44.34196.78NoYes098
14R:R:N305 R:R:N309 40.92799.54NoYes099
15R:R:N309 R:R:Y313 68.71915.81YesYes299
16R:R:R141 R:R:Y313 1007.2NoYes099
17R:R:M137 R:R:R141 98.532512.41NoNo089
18R:R:M137 R:R:Y82 96.93393.59NoYes087
19R:R:V78 R:R:Y82 40.21947.57YesYes367
20R:R:R155 R:R:V78 38.68136.54YesYes376
21R:R:R155 R:R:T79 70.22693.88YesNo077
22R:R:I83 R:R:T79 45.95313.04NoNo087
23R:R:F320 R:R:I83 42.42815.02YesNo088
24R:R:F320 R:R:V68 32.08526.55YesNo087
25R:R:F324 R:R:V68 21.43476.55NoNo057
26R:R:F315 R:R:F324 17.87445.36NoNo065
27R:R:F315 R:R:L64 14.30917.31NoNo065
28R:R:G61 R:R:L64 10.73881.71NoNo075
29R:R:F93 R:R:Y303 69.238521.66NoYes076
30R:R:F93 R:R:S306 68.17957.93NoNo078
31R:R:D90 R:R:S306 68.07614.42YesNo098
32R:R:D90 R:R:N309 37.60724.04YesYes299
33R:R:D90 R:R:L86 34.17048.14YesNo299
34R:R:L86 R:R:Y313 33.11143.52NoYes299
35R:R:D140 R:R:Y82 40.22198.05NoYes387
36R:R:D140 R:R:R155 38.512413.1NoYes387
37R:R:R319 R:R:T79 21.16746.47NoNo067
38R:R:R319 R:R:S77 10.73375.27NoNo068
39L:L:?2 R:R:F128 41.05654.71YesYes006
40R:R:F128 R:R:S171 28.61833.96YesNo068
41R:R:S171 R:R:T129 15.73124.8NoNo087
42R:R:T129 R:R:W168 10.506816.98NoNo079
43R:R:F99 R:R:W109 10.28745.01YesYes158
44L:L:?1 R:R:Q103 13.14678.88YesNo105
45R:R:Q103 R:R:W109 10.34047.67NoYes158
46R:R:F111 R:R:W109 1519.04NoYes068
47R:R:F111 R:R:P110 17.90972.89NoNo062
48L:L:?1 R:R:V119 10.37078.52YesNo105
49R:R:P110 R:R:Y108 13.43928.34NoNo024
50L:L:?1 R:R:M120 17.892114.82YesNo004
51R:R:M120 R:R:R117 15.17653.72NoNo046
52R:R:R117 R:R:V184 13.68136.54NoYes064
53R:R:F128 R:R:V175 12.95765.24YesNo067
54R:R:I125 R:R:V175 17.60214.61NoNo057
55R:R:I125 R:R:S171 10.49174.64NoNo058
56R:R:F266 R:R:W270 35.423618.04NoYes098
57R:R:F266 R:R:L219 34.78329.74NoYes095
58R:R:I222 R:R:L219 31.72212.85NoYes085
59R:R:I222 R:R:S138 27.64756.19NoNo089
60R:R:C225 R:R:S138 26.94153.44NoNo079
61R:R:C225 R:R:Y142 26.23056.72NoYes078
62R:R:V146 R:R:Y142 17.85436.31NoYes768
63R:R:I229 R:R:V146 17.29951.54NoNo086
64L:L:?2 L:L:?3 15.53226.76YesYes100
65R:R:I229 R:R:V233 15.74131.54NoNo088
66R:R:E252 R:R:V233 14.94965.7NoNo068
67R:R:E252 R:R:G237 12.62481.64NoNo064
68R:R:G237 R:R:V240 11.01111.84NoNo045
69R:R:V240 R:R:W241 10.19418.58NoYes053
70R:R:I125 R:R:L176 21.02622.85NoNo054
71R:R:F128 R:R:Q127 18.04343.51YesNo067
72L:L:?2 R:R:D123 15.04295.25YesYes106
73L:L:?2 L:L:?4 27.105425.55YesYes100
74L:L:?3 R:R:F273 19.85384.57YesYes106
75L:L:?4 R:R:Q127 18.89314.09YesNo007
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:F99 4.64 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L100 18.47 1 Yes No 0 7 0 1
L:L:?1 R:R:Q103 8.88 1 Yes No 0 5 0 1
L:L:?1 R:R:V119 8.52 1 Yes No 0 5 0 1
L:L:?1 R:R:M120 14.82 1 Yes No 0 4 0 1
L:L:?1 R:R:D123 6.47 1 Yes Yes 0 6 0 1
L:L:?2 R:R:D123 5.25 1 Yes Yes 0 6 0 1
L:L:?2 R:R:G124 6.61 1 Yes No 0 4 0 1
L:L:?2 R:R:F128 4.71 1 Yes Yes 0 6 0 1
L:L:?2 R:R:V179 3.84 1 Yes No 0 5 0 1
L:L:?2 R:R:M193 5.47 1 Yes Yes 0 4 0 1
L:L:?2 R:R:F206 17.27 1 Yes Yes 0 5 0 1
L:L:?3 R:R:M193 3.98 1 Yes Yes 0 4 0 1
L:L:?3 R:R:W195 3.2 1 Yes Yes 0 6 0 1
L:L:?3 R:R:F206 3.43 1 Yes Yes 0 5 0 1
L:L:?3 R:R:F273 4.57 1 Yes Yes 0 6 0 1
L:L:?3 R:R:N277 3.86 1 Yes No 0 6 0 1
L:L:?4 R:R:D123 6.94 1 Yes Yes 0 6 0 1
L:L:?4 R:R:Q127 4.09 1 Yes No 0 7 0 1
L:L:?4 R:R:F273 3.74 1 Yes Yes 0 6 0 1
L:L:?4 R:R:Y295 3.6 1 Yes No 0 4 0 1
L:L:?4 R:R:V299 13.72 1 Yes No 0 5 0 1
L:L:?4 R:R:Y303 8.4 1 Yes Yes 0 6 0 1
R:R:F93 R:R:Y303 21.66 0 No Yes 7 6 2 1
R:R:M94 R:R:Y303 5.99 0 No Yes 6 6 2 1
R:R:L97 R:R:Y303 9.38 0 No Yes 6 6 2 1
R:R:F99 R:R:W109 5.01 1 Yes Yes 5 8 1 2
R:R:F99 R:R:V119 10.49 1 Yes No 5 5 1 1
R:R:Q103 R:R:W109 7.67 1 No Yes 5 8 1 2
R:R:C191 R:R:Q103 9.16 1 No No 9 5 2 1
R:R:C116 R:R:W109 3.92 1 No Yes 9 8 2 2
R:R:C191 R:R:W109 11.75 1 No Yes 9 8 2 2
R:R:M115 R:R:V119 3.04 0 No No 5 5 2 1
R:R:C116 R:R:M120 4.86 1 No No 9 4 2 1
R:R:C116 R:R:C191 5.46 1 No No 9 9 2 2
R:R:M120 R:R:R117 3.72 0 No No 4 6 1 2
R:R:D123 R:R:Y303 4.6 1 Yes Yes 6 6 1 1
R:R:G124 R:R:V175 3.68 0 No No 4 7 1 2
R:R:F128 R:R:Q127 3.51 0 Yes No 6 7 1 1
R:R:F128 R:R:F132 3.22 0 Yes No 6 5 1 2
R:R:F128 R:R:S171 3.96 0 Yes No 6 8 1 2
R:R:F128 R:R:V174 7.87 0 Yes No 6 5 1 2
R:R:F128 R:R:V175 5.24 0 Yes No 6 7 1 2
R:R:M193 R:R:S182 4.6 1 Yes No 4 5 1 2
R:R:S182 R:R:W195 3.71 1 No Yes 5 6 2 1
R:R:M193 R:R:W195 9.31 1 Yes Yes 4 6 1 1
R:R:R203 R:R:W195 15.99 0 No Yes 4 6 2 1
R:R:F206 R:R:W195 11.02 1 Yes Yes 5 6 1 1
R:R:F273 R:R:Y274 7.22 1 Yes Yes 6 8 1 2
R:R:F273 R:R:N277 15.71 1 Yes No 6 6 1 1
R:R:L276 R:R:Y295 7.03 0 No No 4 4 2 1
R:R:F99 R:R:G96 3.01 1 Yes No 5 6 1 2
R:R:I207 R:R:I278 2.94 0 No Yes 5 5 1 2
R:R:W195 R:R:W202 2.81 1 Yes No 6 1 1 2
L:L:?3 R:R:I207 2.68 1 Yes No 0 5 0 1
R:R:F206 R:R:V178 2.62 1 Yes No 5 4 1 2
R:R:A121 R:R:V179 1.7 0 No No 5 5 2 1
R:R:V179 R:R:V180 1.6 0 No No 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8XIQ_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.04
Number of Linked Nodes 269
Number of Links 298
Number of Hubs 33
Number of Links mediated by Hubs 132
Number of Communities 8
Number of Nodes involved in Communities 47
Number of Links involved in Communities 68
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 79989
Length Of Smallest Path 3
Average Path Length 15.268
Length of Longest Path 38
Minimum Path Strength 1.405
Average Path Strength 6.95918
Maximum Path Strength 24.7133
Minimum Path Correlation 0.7
Average Path Correlation 0.931085
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 46.6693
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.6629
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNIT
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeNIT
Name4-NITROANILINE
SynonymsPARANITROANILINE
Identifier
FormulaC6 H6 N2 O2
Molecular Weight138.124
SMILES
PubChem7475
Formal Charge0
Total Atoms16
Total Chiral Atoms0
Total Bonds16
Total Aromatic Bonds6

CodeFC0
PDB ResiduesL:L:?2
Environment DetailsOpen EMBL-EBI Page
CodeFC0
NameN-CARBOXY-L-PHENYLALANINE
Synonyms
Identifier
FormulaC10 H11 N O4
Molecular Weight209.199
SMILES
PubChem20637693
Formal Charge0
Total Atoms26
Total Chiral Atoms1
Total Bonds26
Total Aromatic Bonds6

CodeNLE
PDB ResiduesL:L:?3
Environment DetailsOpen EMBL-EBI Page
CodeNLE
NameNorleucine
Synonyms
  • L-NORLEUCINE
  • Norleucine
Identifier
FormulaC6 H13 N O2
Molecular Weight131.173
SMILES
PubChem21236
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

CodeA1D
PDB ResiduesL:L:?4
Environment DetailsOpen EMBL-EBI Page
CodeA1D
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP32745
Sequence
>8XIQ_nogp_Chain_R
LAVSGVLIP LVYLVVCVV GLLGNSLVI YVVLRHTAS PSVTNVYIL 
NLALADELF MLGLPFLAA QNALSYWPF GSLMCRLVM AVDGINQFT 
SIFCLTVMS VDRYLAVVH PTRSARWRT APVARTVSA AVWVASAVV 
VLPVVVFSG VPRGMSTCH MQWPEPAAA WRAGFIIYT AALGFFGPL 
LVICLCYLL IVVKVRSAG RRVWAPSCQ RRRRSERRV TRMVVAVVA 
LFVLCWMPF YVLNIVNVV CPLPEEPAF FGLYFLVVA LPYANSCAN 
PILYGFLSY RFKQGFRRV L


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8XIQAPeptideSomatostatinSST3Homo sapiensL796778-chim(NtGi1-Gs-CtGi1)/β1/γ22.712024-07-03doi.org/10.1073/pnas.2400298121
8XIQ (No Gprot) APeptideSomatostatinSST3Homo sapiensL796778-2.712024-07-03doi.org/10.1073/pnas.2400298121
8XIRAPeptideSomatostatinSST3Homo sapiensPasireotide-chim(NtGi1-Gs-CtGi1)/β1/γ22.522024-07-03doi.org/10.1073/pnas.2400298121
8XIR (No Gprot) APeptideSomatostatinSST3Homo sapiensPasireotide-2.522024-07-03doi.org/10.1073/pnas.2400298121
8ZBIAPeptideSomatostatinSST3Homo sapiensSomatostatin-14-Gi1/β1/γ22.792025-04-30To be published
8ZBI (No Gprot) APeptideSomatostatinSST3Homo sapiensSomatostatin-14-2.792025-04-30To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8XIQ_nogp.zip



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