Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F208 8.3275415
2R:R:P211 6.755416
3R:R:L220 5.02463
4R:R:F224 6.13716
5R:R:M243 10.0275417
6R:R:F245 7.565618
7R:R:R250 6.34576
8R:R:W256 9.8925488
9R:R:W260 8.9925485
10R:R:Y275 9.96448
11R:R:F282 8.305449
12R:R:Y284 6.37286709
13R:R:Y296 6.434538
14R:R:F297 6.4825405
15R:R:H303 5.395616
16R:R:Y324 11.824512
17R:R:F340 6.96667629
18R:R:Y344 7.56571729
19R:R:F345 5.144508
20R:R:W353 10.37659
21R:R:W354 14.6825439
22R:R:F362 5.006508
23R:R:L363 7.005409
24R:R:W386 7.06459
25R:R:K392 6.2175426
26R:R:I396 9.76427
27R:R:S408 6.7225418
28R:R:V413 5.47429
29R:R:I435 2.7925405
30R:R:Y478 13.4575438
31R:R:P481 4.3125409
32R:R:E492 6.9419
33R:R:R496 5.395407
34R:R:W499 9.978519
35R:R:W503 12.0775415
36R:R:L504 6.71404
37R:R:Y511 7.09714714
38R:R:P525 10.11519
39R:R:F527 10.445416
40R:R:F530 5.82833617
41R:R:K533 6.17419
42R:R:Y534 7.235418
43R:R:V540 5.965438
44R:R:T544 5.6725498
45R:R:W557 6.634109
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F206 R:R:L504 11.13543.65NoYes024
2R:R:F208 R:R:L504 22.0398.53YesYes054
3R:R:F208 R:R:F224 23.02944.29YesYes156
4R:R:W503 R:R:Y511 22.74333.86YesYes154
5R:R:Y324 R:R:Y511 13.42413.97YesYes124
6R:R:F224 R:R:M243 54.88394.98YesYes167
7R:R:M243 R:R:Y244 79.720913.17YesNo174
8R:R:F245 R:R:Y244 78.10197.22YesNo184
9R:R:F245 R:R:L407 73.355610.96YesNo188
10R:R:L407 R:R:Y534 1008.21NoYes188
11R:R:D405 R:R:L415 10.30542.71NoNo097
12R:R:A232 R:R:F224 29.98424.16NoYes056
13R:R:L406 R:R:V327 27.85594.47NoNo057
14R:R:A232 R:R:V327 28.923.39NoNo057
15R:R:L406 R:R:R250 24.43812.43NoYes056
16R:R:F245 R:R:F527 15.87968.57YesYes186
17R:R:E492 R:R:R496 13.24856.98YesYes097
18R:R:E492 R:R:F530 12.6988.16YesYes197
19R:R:D311 R:R:R250 18.58877.15NoYes066
20R:R:D311 R:R:R254 17.38377.15NoNo066
21R:R:G409 R:R:R254 16.174.5NoNo096
22R:R:W256 R:R:W260 12.977618.74YesYes885
23R:R:V257 R:R:Y534 48.04195.05NoYes078
24R:R:H303 R:R:V257 48.15894.15YesNo067
25R:R:S408 R:R:Y534 48.26947.63YesYes188
26R:R:H303 R:R:S408 54.71065.58YesYes168
27R:R:I542 R:R:W260 13.1514.7NoYes085
28R:R:H303 R:R:M538 25.01257.88YesNo168
29R:R:A300 R:R:C264 28.96123.61NoNo089
30R:R:C264 R:R:M538 24.7224.86NoNo098
31R:R:C264 R:R:I542 12.98194.91NoNo098
32R:R:A300 R:R:C265 27.73243.61NoNo085
33R:R:C265 R:R:F297 26.49924.19NoYes055
34R:R:H303 R:R:L343 99.46046.43YesNo066
35R:R:L343 R:R:Y412 98.79289.38NoNo066
36R:R:Y344 R:R:Y412 98.45266.95YesNo096
37R:R:T393 R:R:Y344 87.23043.75NoYes099
38R:R:F345 R:R:T393 86.76453.89YesNo089
39R:R:F345 R:R:W386 81.86655.01YesYes089
40R:R:W353 R:R:W386 79.387112.18YesYes599
41R:R:P288 R:R:W353 73.54414.05NoYes089
42R:R:L357 R:R:P288 47.19454.93NoNo098
43R:R:I289 R:R:L357 40.35465.71NoNo099
44R:R:I289 R:R:W547 39.55054.7NoNo099
45R:R:F474 R:R:W547 38.107110.02NoNo099
46R:R:F474 R:R:V540 37.36813.93NoYes098
47R:R:V540 R:R:Y296 21.633710.09YesYes388
48R:R:G541 R:R:Y296 18.64295.79NoYes098
49R:R:G541 R:R:T544 17.74133.64NoYes098
50R:R:F297 R:R:L269 22.77376.09YesNo056
51R:R:L269 R:R:L273 21.51888.3NoNo066
52R:R:L273 R:R:W557 20.36153.42NoYes069
53R:R:T271 R:R:T544 11.27417.85NoYes998
54R:R:I548 R:R:T271 10.42247.6NoNo089
55R:R:P288 R:R:Y284 36.67676.95NoYes089
56R:R:I374 R:R:Y284 22.41613.63NoYes099
57R:R:V540 R:R:Y478 10.01066.31YesYes388
58R:R:I374 R:R:L363 21.53184.28NoYes099
59R:R:F362 R:R:L363 11.353.65YesYes089
60R:R:R496 R:R:V418 10.19923.92YesNo074
61R:R:F530 R:R:L407 26.05933.65YesNo178
62R:R:M243 R:R:W503 22.199318.61YesYes175
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 9EPO
Class F
SubFamily Protein
Type Frizzled
SubType FZD7
Species Homo sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 1.9
Date 2024-10-02
D.O.I. doi.org/10.1038/s41467-024-51664-4
Net Summary
Imin 3.61
Number of Linked Nodes 326
Number of Links 367
Number of Hubs 45
Number of Links mediated by Hubs 171
Number of Communities 10
Number of Nodes involved in Communities 71
Number of Links involved in Communities 95
Path Summary
Number Of Nodes in MetaPath 63
Number Of Links MetaPath 62
Number of Shortest Paths 82346
Length Of Smallest Path 3
Average Path Length 18.2854
Length of Longest Path 42
Minimum Path Strength 1.28
Average Path Strength 6.64192
Maximum Path Strength 25.335
Minimum Path Correlation 0.7
Average Path Correlation 0.935167
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.0303
Average % Of Corr. Nodes 43.7842
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.8641
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• molecular transducer activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Wnt receptor activity   • G protein-coupled receptor activity   • protein binding   • binding   • PDZ domain binding   • protein domain specific binding   • signaling receptor binding   • G protein-coupled receptor binding   • frizzled binding   • ion binding   • phosphatidylinositol-4,5-bisphosphate binding   • anion binding   • phosphatidylinositol bisphosphate binding   • phospholipid binding   • lipid binding   • phosphatidylinositol phosphate binding   • phosphatidylinositol binding   • small molecule binding   • Wnt-protein binding   • cellular response to stimulus   • regulation of biological process   • regulation of signaling   • regulation of cellular process   • cell surface receptor signaling pathway   • response to stimulus   • regulation of Wnt signaling pathway   • signaling   • regulation of canonical Wnt signaling pathway   • canonical Wnt signaling pathway   • biological regulation   • regulation of signal transduction   • cell communication   • regulation of response to stimulus
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of signaling   • regulation of cellular process   • cell surface receptor signaling pathway   • response to stimulus   • regulation of Wnt signaling pathway   • signaling   • regulation of canonical Wnt signaling pathway   • canonical Wnt signaling pathway   • biological regulation   • regulation of signal transduction   • cell communication   • regulation of response to stimulus   • regulation of cell communication   • cellular process   • signal transduction   • Wnt signaling pathway   • wound healing   • cell population proliferation   • positive regulation of cell population proliferation   • positive regulation of epithelial cell proliferation   • positive regulation of biological process   • response to stress   • regulation of cell population proliferation   • regulation of epithelial cell proliferation   • response to wounding   • epithelial cell proliferation   • positive regulation of cellular process   • positive regulation of epithelial cell proliferation involved in wound healing   • multicellular organismal process   • regulation of developmental process   • cellular developmental process   • negative regulation of biological process   • negative regulation of muscle cell differentiation   • regulation of cell differentiation   • regulation of striated muscle cell differentiation   • regulation of cardiac muscle cell differentiation   • muscle cell differentiation   • striated muscle tissue development   • muscle structure development   • multicellular organism development   • cell differentiation   • negative regulation of cardiac muscle cell differentiation   • anatomical structure development   • negative regulation of cellular process   • negative regulation of cell differentiation   • regulation of multicellular organismal process   • muscle tissue development   • negative regulation of cardiocyte differentiation   • system development   • developmental process   • heart development   • cardiac muscle tissue development   • negative regulation of developmental process   • negative regulation of striated muscle cell differentiation   • animal organ development   • cardiac muscle cell differentiation   • tissue development   • cardiocyte differentiation   • circulatory system development   • regulation of muscle cell differentiation   • regulation of cardiocyte differentiation   • striated muscle cell differentiation   • negative regulation of multicellular organismal process   • non-canonical Wnt signaling pathway   • cell adhesion   • substrate adhesion-dependent cell spreading   • cell-substrate adhesion   • response to lipid   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • response to retinoic acid   • cellular response to chemical stimulus   • cellular response to retinoic acid   • response to chemical   • cellular response to lipid   • nervous system development   • generation of neurons   • neurogenesis   • neuron differentiation   • hemopoiesis   • cell activation   • cell development   • mononuclear cell differentiation   • lymphocyte activation   • lymphocyte differentiation   • leukocyte activation   • T cell differentiation in thymus   • T cell activation   • immune system process   • T cell differentiation   • leukocyte differentiation   • positive regulation of cell communication   • positive regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of JNK cascade   • regulation of intracellular signal transduction   • JNK cascade   • intracellular signaling cassette   • positive regulation of MAPK cascade   • regulation of JNK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • MAPK cascade   • positive regulation of signaling   • Wnt signaling pathway, planar cell polarity pathway   • RNA metabolic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • DNA-templated transcription   • regulation of RNA metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of biosynthetic process   • primary metabolic process   • regulation of macromolecule metabolic process   • nucleobase-containing compound biosynthetic process   • gene expression   • macromolecule biosynthetic process   • nucleic acid metabolic process   • regulation of gene expression   • biosynthetic process   • metabolic process   • regulation of macromolecule biosynthetic process   • regulation of DNA-templated transcription   • macromolecule metabolic process   • regulation of metabolic process   • maintenance of cell number   • stem cell population maintenance   • regulation of cell-substrate adhesion   • regulation of cell adhesion   • negative regulation of cell adhesion   • negative regulation of cell-substrate adhesion   • positive regulation of DNA-templated transcription   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • positive regulation of RNA metabolic process   • positive regulation of RNA biosynthetic process   • positive regulation of phosphorylation   • positive regulation of phosphorus metabolic process   • phosphorylation   • positive regulation of phosphate metabolic process   • phosphate-containing compound metabolic process   • regulation of phosphorus metabolic process   • regulation of phosphorylation   • phosphorus metabolic process   • somatic stem cell division   • stem cell division   • cell division   • negative regulation of cell fate specification   • embryo development   • regulation of ectodermal cell fate specification   • negative regulation of cell fate commitment   • ectoderm development   • ectodermal cell differentiation   • negative regulation of ectodermal cell fate specification   • formation of primary germ layer   • ectodermal cell fate commitment   • regulation of cell fate commitment   • embryonic morphogenesis   • ectodermal cell fate specification   • cell fate specification   • gastrulation   • ectoderm formation   • cell fate commitment involved in formation of primary germ layer   • anatomical structure morphogenesis   • regulation of cell fate specification   • anatomical structure formation involved in morphogenesis   • cell fate commitment   • epithelium development   • mesenchymal to epithelial transition   • epithelial cell differentiation   • tissue regeneration   • skeletal muscle tissue regeneration   • developmental growth   • skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration   • growth   • regeneration   • cellular anatomical structure   • membrane   • cell periphery   • plasma membrane   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • organelle   • intracellular membrane-bounded organelle   • endosome membrane   • endosome   • intracellular vesicle   • recycling endosome   • endomembrane system
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • cell periphery   • plasma membrane   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • organelle   • intracellular membrane-bounded organelle   • endosome membrane   • endosome   • intracellular vesicle   • recycling endosome   • endomembrane system   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • recycling endosome membrane   • vesicle membrane   • cytoplasmic vesicle   • cytoplasm   • vesicle   • organelle membrane
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO75084
Sequence
>9EPO_Chain_R
FPFSCPRQL KVPPYLGYR FLGERDCGA PCEPGRANG LMYFKEEER 
RFARLWVGV WSVLCCAST LFTVLTYLV DMRRFSYPE RPIIFLSGC 
YFMVAVAHV AGFLLEDRA VCVERFSDD GYRTVAQGT KKEGCTILF 
MVLYFFGMA SSIWWVILS LTWFLAAGM KWGHEAIEA NSQYFHLAA 
WAVPAVKTI TILAMGQVD GDLLSGVCY VGLSSVDAL RGFVLAPLF 
VYLFIGTSF LLAGFVSLF RIRLEKLMV RIGVFSVLY TVPATIVLA 
CYFYEQAFR EHWERTWLL QTCKSYAVP CPPGHFPPM SPDFTVFMI 
KYLMTMIVG ITTGFWIWS GKTLQSWRR FYHR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8YY8FProteinFrizzledFZD7Homo sapiens--Gs/β1/γ23.222024-04-24doi.org/10.1038/s41422-021-00525-6
8YY8 (No Gprot) FProteinFrizzledFZD7Homo sapiens--3.222024-04-24doi.org/10.1038/s41422-021-00525-6
9EW2FProteinFrizzledFZD7Homo sapiens--Gs/β1/γ23.22024-10-02doi.org/10.1038/s41467-024-51664-4
9EW2 (No Gprot) FProteinFrizzledFZD7Homo sapiens--3.22024-10-02doi.org/10.1038/s41467-024-51664-4




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9EPO.zip



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