Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 10.3412810
2R:R:M18 7.242515
3R:R:G32 2.28407
4R:R:N33 6.6475429
5R:R:F40 6.418547
6R:R:F55 7.422506
7R:R:N56 7.0825459
8R:R:M65 4.5325426
9R:R:R71 11.1575416
10R:R:Y74 7.53615
11R:R:Y75 8.954515
12R:R:W81 4.666508
13R:R:F83 5.326507
14R:R:F93 8.0225415
15R:R:M97 4.324516
16R:R:N98 5.412518
17R:R:I103 4.7175408
18R:R:F105 6.412557
19R:R:Y114 6.47833679
20R:R:W140 5.5025409
21R:R:Y149 9.835487
22R:R:E166 9.7825414
23R:R:F168 10.9625434
24R:R:H177 9.085405
25R:R:F181 7.0625435
26R:R:Q182 4.2875405
27R:R:F185 6.172508
28R:R:L189 5.425406
29R:R:C195 2.7725408
30R:R:K198 6.98404
31R:R:L209 2.345402
32R:R:Y233 9.08409
33R:R:R240 10.724535
34R:R:F243 6.124534
35R:R:L244 6.665435
36R:R:H261 11.2575415
37R:R:S265 4.1025415
38R:R:Y278 6.4475409
39R:R:Y279 7.23447
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:R71 43.141621.46YesYes106
2R:R:R71 R:R:Y74 42.05035.14YesYes165
3R:R:S164 R:R:Y74 24.68545.09NoYes045
4R:R:C157 R:R:S164 19.77863.44NoNo034
5L:L:?1 R:R:Y75 64.64875.75YesYes105
6R:R:Y74 R:R:Y75 58.54713.97YesYes155
7L:L:?1 R:R:E166 43.33287.8YesYes104
8R:R:E166 R:R:Y74 50.127416.83YesYes145
9R:R:C157 R:R:C6 14.85587.28NoNo036
10R:R:H257 R:R:H261 29.807216.72NoYes045
11R:R:H257 R:R:I9 12.41849.28NoNo044
12R:R:R79 R:R:Y74 29.576210.29NoYes055
13R:R:G11 R:R:R79 24.68543NoNo045
14R:R:D12 R:R:G11 14.85581.68NoNo044
15R:R:M18 R:R:Y75 36.928510.78YesYes155
16R:R:M18 R:R:P19 17.95445.03YesNo056
17R:R:P19 R:R:T72 15.23021.75NoNo067
18R:R:P69 R:R:T72 13.57341.75NoNo097
19R:R:L68 R:R:P69 11.64576.57NoNo289
20R:R:M18 R:R:S265 14.83196.13YesYes155
21R:R:L21 R:R:S265 10.82523NoYes045
22R:R:L68 R:R:M65 14.80017.07NoYes286
23R:R:M65 R:R:N33 16.32954.21YesYes269
24L:L:?1 R:R:R99 1005.96YesNo008
25R:R:E184 R:R:R99 99.72125.82NoNo058
26R:R:E184 R:R:I103 95.92165.47NoYes058
27R:R:I103 R:R:Y233 64.20268.46YesYes089
28R:R:N270 R:R:Y233 64.274313.96NoYes099
29R:R:D274 R:R:N270 61.900612.12NoNo099
30R:R:D274 R:R:D61 31.41633.99NoNo099
31R:R:D61 R:R:N33 27.30610.77NoYes099
32R:R:N33 R:R:P275 16.38526.52YesNo099
33R:R:G32 R:R:P275 14.09114.06YesNo079
34L:L:?1 R:R:L95 70.511417.66YesNo106
35R:R:C67 R:R:L95 69.93794.76NoNo166
36R:R:C67 R:R:N98 63.86814.72NoYes168
37R:R:M97 R:R:N98 64.56114.21YesYes168
38R:R:M97 R:R:W140 71.11683.49YesYes069
39R:R:F105 R:R:W140 66.863212.03YesYes079
40R:R:F105 R:R:N56 61.42278.46YesYes579
41R:R:F55 R:R:N56 38.23483.62YesYes069
42R:R:F40 R:R:F55 25.41827.5YesYes076
43R:R:F40 R:R:Y279 17.986314.44YesYes477
44R:R:F55 R:R:L37 11.72536.09YesNo068
45R:R:G39 R:R:Y279 13.25474.35NoYes087
46R:R:C38 R:R:G39 10.63411.96NoNo048
47R:R:F40 R:R:M44 10.10833.73YesNo476
48R:R:D274 R:R:L106 57.14514.07NoNo098
49R:R:L106 R:R:Y278 41.41314.69NoYes089
50R:R:L54 R:R:Y278 25.56164.69NoYes089
51R:R:N56 R:R:V52 26.78834.43YesNo097
52R:R:A132 R:R:V52 21.97713.39NoNo087
53R:R:A132 R:R:Y53 14.62484NoNo087
54R:R:F105 R:R:L57 23.27544.87YesNo079
55R:R:W81 R:R:Y74 95.63493.86YesYes085
56R:R:R77 R:R:W81 14.85584NoYes048
57R:R:F83 R:R:W81 44.15339.02YesYes078
58R:R:F83 R:R:P87 24.685410.11YesNo076
59R:R:I86 R:R:P87 19.77863.39NoNo036
60R:R:D85 R:R:I86 14.85585.6NoNo033
61R:R:C88 R:R:W81 23.93665.22NoYes098
62R:R:F93 R:R:M97 17.08624.98YesYes156
63R:R:F93 R:R:L150 15.273.65YesNo055
64R:R:I103 R:R:P188 76.14313.39YesNo089
65R:R:P188 R:R:T107 72.25595.25NoNo097
66R:R:I191 R:R:T107 68.33683.04NoNo067
67R:R:C195 R:R:I191 66.36931.64YesNo086
68R:R:C195 R:R:Y114 60.6584.03YesYes089
69R:R:F115 R:R:Y114 21.63455.16NoYes059
70R:R:K198 R:R:Y114 12.60169.55YesYes049
71R:R:F115 R:R:V124 20.16895.24NoNo055
72R:R:G101 R:R:W140 26.72462.81NoYes079
73R:R:G101 R:R:V104 24.86861.84NoNo076
74R:R:L139 R:R:V104 22.98872.98NoNo076
75R:R:I135 R:R:L139 21.15662.85NoNo067
76R:R:I135 R:R:V131 19.34051.54NoNo064
77R:R:I127 R:R:V131 15.44536.14NoNo074
78R:R:I127 R:R:V124 15.32581.54NoNo075
79R:R:E184 R:R:F181 43.42045.83NoYes055
80R:R:F168 R:R:F181 21.132712.86YesYes345
81R:R:F168 R:R:H177 27.194511.31YesYes045
82R:R:H177 R:R:Y149 20.646813.07YesYes057
83R:R:H257 R:R:M170 22.956810.51NoNo043
84R:R:F243 R:R:M170 23.56229.95YesNo043
85R:R:F181 R:R:R240 23.88884.28YesYes355
86R:R:D178 R:R:R240 18.273115.48NoYes345
87R:R:D178 R:R:Q182 22.24793.92NoYes045
88R:R:F181 R:R:S236 16.80745.28YesNo056
89R:R:F229 R:R:Y233 32.97755.16NoYes099
90R:R:F185 R:R:F229 30.87465.36YesNo089
91R:R:F185 R:R:L189 15.57277.31YesYes086
92R:R:F185 R:R:L234 12.46613.65YesNo085
93R:R:I199 R:R:Y114 34.2522.42NoYes089
94R:R:I199 R:R:I222 14.91952.94NoNo087
95R:R:I199 R:R:V117 17.5883.07NoNo088
96R:R:L203 R:R:V117 15.13461.49NoNo088
97R:R:L203 R:R:L209 12.65731.38NoYes082
98R:R:T267 R:R:Y233 14.91958.74NoYes089
99R:R:S236 R:R:T267 14.09914.8NoNo068
100R:R:F243 R:R:S250 11.58992.64YesNo042
101R:R:F243 R:R:V256 11.58992.62YesNo043
102R:R:V277 R:R:Y278 14.36995.05NoYes089
103R:R:L273 R:R:V277 11.52621.49NoNo078
104R:R:H261 R:R:Y75 14.12310.89YesYes155
105R:R:F243 R:R:R240 24.645511.76YesYes345
106R:R:F40 R:R:L54 19.88213.65YesNo078
107R:R:L106 R:R:L57 22.82145.54NoNo089
108R:R:L150 R:R:Y149 14.33818.21NoYes057
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:R71 21.46 1 Yes Yes 0 6 0 1
L:L:?1 R:R:Y75 5.75 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L95 17.66 1 Yes No 0 6 0 1
L:L:?1 R:R:R99 5.96 1 Yes No 0 8 0 1
L:L:?1 R:R:E166 7.8 1 Yes Yes 0 4 0 1
L:L:?1 R:R:H261 7.57 1 Yes Yes 0 5 0 1
L:L:?1 R:R:Y268 13.81 1 Yes No 0 7 0 1
R:R:M18 R:R:Y75 10.78 1 Yes Yes 5 5 2 1
R:R:C67 R:R:L95 4.76 1 No No 6 6 2 1
R:R:R71 R:R:Y74 5.14 1 Yes Yes 6 5 1 2
R:R:R71 R:R:Y75 13.38 1 Yes Yes 6 5 1 1
R:R:E166 R:R:R71 4.65 1 Yes Yes 4 6 1 1
R:R:Y74 R:R:Y75 3.97 1 Yes Yes 5 5 2 1
R:R:E166 R:R:Y74 16.83 1 Yes Yes 4 5 1 2
R:R:H261 R:R:Y75 10.89 1 Yes Yes 5 5 1 1
R:R:L95 R:R:Y268 5.86 1 No No 6 7 1 1
R:R:E184 R:R:R99 5.82 0 No No 5 8 2 1
R:R:E166 R:R:H261 9.85 1 Yes Yes 4 5 1 1
R:R:H257 R:R:H261 16.72 0 No Yes 4 5 2 1
L:L:?1 R:R:L92 2.72 1 Yes No 0 6 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9IZD_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.39
Number of Linked Nodes 264
Number of Links 285
Number of Hubs 39
Number of Links mediated by Hubs 140
Number of Communities 8
Number of Nodes involved in Communities 44
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 109
Number Of Links MetaPath 108
Number of Shortest Paths 46287
Length Of Smallest Path 3
Average Path Length 12.2144
Length of Longest Path 24
Minimum Path Strength 1.355
Average Path Strength 6.42242
Maximum Path Strength 19.56
Minimum Path Correlation 0.7
Average Path Correlation 0.923219
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.26316
Average % Of Corr. Nodes 50.9921
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.5396
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1D
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1D
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9BXC0
Sequence
>9IZD_nogp_Chain_R
CCRIEGDTI SQVMPPLLI VAFVLGALG NGVALCGFC FHMKTWKPS 
TVYLFNLAV ADFLLMICL PFRTDYYLR RRHWAFGDI PCRVGLFTL 
AMNRAGSIV FLTVVAADR YFKVVHPHH AVNTISTRV AAGIVCTLW 
ALVILGTVY LLLENHLCV QETAVSCES FIMESANGW HDIMFQLEF 
FMPLGIILF CSFKIVWSL RRRQQLARQ ARMKKATRF IMVVAIVFI 
TCYLPSVSA RLYFLWTVP SSACDPSVH GALHITLSF TYMNSMLDP 
LVYYFSSPS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9IZDAAlicarboxylic acidHydroxycarboxylic acidHCA1Homo sapiensCHBA-Gi1/β1/γ23.162025-04-02To be published
9IZD (No Gprot) AAlicarboxylic acidHydroxycarboxylic acidHCA1Homo sapiensCHBA-3.162025-04-02To be published
9J8ZAAlicarboxylic acidHydroxycarboxylic acidHCA1Homo sapiens--Gi1/β1/γ23.362025-04-02To be published
9J8Z (No Gprot) AAlicarboxylic acidHydroxycarboxylic acidHCA1Homo sapiens--3.362025-04-02To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9IZD_nogp.zip



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