CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0
Networks57
 missing image

This ligand is also present in the following 57 networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
1GZM A Sensory Opsins Rhodopsin Bos Taurus 11-cis-Retinal - - 2.65 2003-11-20 doi.org/10.1016/j.jmb.2004.08.090

A 2D representation of the interactions of BMA in 1GZM
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 5.43 0 No No 0 4 1 2
H:H:?1 H:H:?2 28.78 2 No No 0 0 2 1
H:H:?2 H:H:?3 32.11 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.11
Average Nodes In Shell4.00
Average Hubs In Shell0.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 1GZM
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?4 H:H:?5 38.74 4 No No 0 0 2 1
H:H:?5 H:H:?6 28.25 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.25
Average Nodes In Shell3.00
Average Hubs In Shell0.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
2HPY A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - - 2.8 2006-08-22 doi.org/10.1073/pnas.0601765103

A 2D representation of the interactions of BMA in 2HPY
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?6 H:H:?7 43.17 2 Yes No 0 0 2 1
H:H:?7 H:H:?8 26.97 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength26.97
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
2I35 A Sensory Opsins Rhodopsin Bos Taurus 11-cis-Retinal - - 3.8 2006-10-17 doi.org/10.1073/pnas.0608022103

A 2D representation of the interactions of BMA in 2I35
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 33.21 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength30.82
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
2PED A Sensory Opsins Rhodopsin Bos Taurus 9-cis-Retinal - - 2.95 2007-10-30 doi.org/10.1529/biophysj.107.108225

A 2D representation of the interactions of BMA in 2PED
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?6 H:H:?7 46.49 1 Yes No 0 0 2 1
H:H:?7 H:H:?8 26.97 0 No No 0 0 1 0
H:H:?7 R:R:R21 3.26 0 No No 0 4 1 2
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength26.97
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
2X72 A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - Gt(CT) 3 2011-03-16 doi.org/10.1038/nature09795

A 2D representation of the interactions of BMA in 2X72
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 6.52 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.69 1 Yes No 0 4 1 2
H:H:?1 H:H:?2 39.85 1 Yes Yes 0 0 2 1
H:H:?2 H:H:?3 30.82 1 Yes No 0 0 1 0
H:H:?2 H:H:?5 11.46 1 Yes No 0 0 1 1
H:H:?3 H:H:?4 47.27 1 No No 0 0 0 1
H:H:?3 H:H:?5 28.07 1 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub1.00
Average Interaction Strength35.39
Average Nodes In Shell6.00
Average Hubs In Shell2.00
Average Links In Shell7.00
Average Links Mediated by Hubs In Shell5.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3C9L A Sensory Opsins Rhodopsin Bos Taurus 11-cis-Retinal - - 2.65 2008-08-05 doi.org/10.1107/S0907444908017162

A 2D representation of the interactions of BMA in 3C9L
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 28.78 2 No No 0 0 2 1
H:H:?2 H:H:?3 32.11 0 No No 0 0 1 0
H:H:?2 R:R:R21 5.43 0 No No 0 4 1 2
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.11
Average Nodes In Shell4.00
Average Hubs In Shell0.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 3C9L
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?4 H:H:?5 38.74 4 No No 0 0 2 1
H:H:?5 H:H:?6 28.25 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.25
Average Nodes In Shell3.00
Average Hubs In Shell0.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3CAP A Sensory Opsins Rhodopsin Bos Taurus - - - 2.9 2008-06-24 doi.org/10.1038/nature07063

A 2D representation of the interactions of BMA in 3CAP
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 4.35 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.69 1 No No 0 4 1 2
H:H:?1 H:H:?2 37.64 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 32.11 1 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.11
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3DQB A Sensory Opsins Rhodopsin Bos Taurus - - Gt(CT) 3.2 2008-09-23 doi.org/10.1038/nature07330

A 2D representation of the interactions of BMA in 3DQB
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 4.35 2 Yes No 0 4 2 2
H:H:?2 R:R:R21 7.6 2 No No 0 4 1 2
H:H:?1 H:H:?2 35.42 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 33.39 2 No No 0 0 1 0
H:H:?3 H:H:?8 31.02 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.20
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3OAX A Sensory Opsins Rhodopsin Bos Taurus 11-cis-Retinal - - 2.6 2011-01-19 doi.org/10.1016/j.bpj.2010.08.003

A 2D representation of the interactions of BMA in 3OAX
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 42.06 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 28.25 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.25
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3PQR A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - Gt(CT) 2.85 2011-03-09 doi.org/10.1038/nature09789

A 2D representation of the interactions of BMA in 3PQR
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 38.74 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 25.68 0 No No 0 0 1 0
H:H:?3 H:H:?6 39.89 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.78
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3PXO A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - - 3 2011-03-09 doi.org/10.1038/nature09789

A 2D representation of the interactions of BMA in 3PXO
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 36.53 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 28.25 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.25
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4BEY A Sensory Opsins Rhodopsin Bos Taurus - - Gt(CT) 2.9 2013-05-08 doi.org/10.1038/embor.2013.44

A 2D representation of the interactions of BMA in 4BEY
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 5.43 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.69 1 No No 0 4 1 2
H:H:?1 H:H:?2 37.64 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 1 No No 0 0 1 0
H:H:?3 H:H:?5 48.75 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength39.78
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4BEZ A Sensory Opsins Rhodopsin Bos Taurus - - - 3.3 2013-04-24 doi.org/10.1038/embor.2013.44

A 2D representation of the interactions of BMA in 4BEZ
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 6.52 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 7.6 1 No No 0 4 1 2
H:H:?1 H:H:?2 37.64 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 34.67 1 No No 0 0 1 0
H:H:?3 H:H:?5 44.32 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength39.50
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4J4Q A Sensory Opsins Rhodopsin Bos Taurus Octyl Beta-D-Glucopyranoside - Gt(CT) 2.65 2013-10-30 doi.org/10.1002/anie.201302374

A 2D representation of the interactions of BMA in 4J4Q
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 33.21 4 Yes No 0 0 2 1
H:H:?2 H:H:?3 28.25 0 No No 0 0 1 0
H:H:?3 H:H:?5 29.55 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.90
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4N4W F Protein Frizzled SMO Homo Sapiens - SANT-1 - 2.8 2014-01-22 doi.org/10.1038/ncomms5355

A 2D representation of the interactions of BMA in 4N4W
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 26.57 0 No No 0 0 2 1
H:H:?2 H:H:?3 28.25 0 No No 0 0 1 0
H:H:?2 R:R:D209 7.28 0 No No 0 4 1 2
H:H:?3 H:H:?4 29.55 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.90
Average Nodes In Shell5.00
Average Hubs In Shell0.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4PXF A Sensory Opsins Rhodopsin Bos Taurus Octyl-Beta-D-Glucopyranoside - Arrestin1 Finger Loop 2.75 2014-09-17 doi.org/10.1038/ncomms5801

A 2D representation of the interactions of BMA in 4PXF
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 5.43 0 No No 0 4 1 2
H:H:?1 H:H:?2 37.64 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 29.54 0 No No 0 0 1 0
H:H:?3 H:H:?5 36.93 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength33.23
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4X1H A Sensory Opsins Rhodopsin Bos Taurus Nonyl-Beta-D-Glucopyranoside - Gt(CT) 2.29 2015-11-04 doi.org/10.1016/j.str.2015.09.015

A 2D representation of the interactions of BMA in 4X1H
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 38.74 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 34.67 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength34.67
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5DYS A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - - 2.3 2016-08-10 doi.org/10.15252/embr.201642671

A 2D representation of the interactions of BMA in 5DYS
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 37.64 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 28.25 0 No No 0 0 1 0
H:H:?3 H:H:?6 39.89 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength34.07
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5EN0 A Sensory Opsins Rhodopsin Bos Taurus All-trans-Retinal - Gt(CT) 2.81 2016-08-10 doi.org/10.15252/embr.201642671

A 2D representation of the interactions of BMA in 5EN0
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 5.45 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.72 1 No No 0 4 1 2
H:H:?1 H:H:?2 37.89 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 25.98 1 No No 0 0 1 0
H:H:?3 H:H:?6 44.81 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength35.40
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5TE3 A Sensory Opsins Rhodopsin Bos Taurus Octyl-Beta-D-Glucopyranoside - - 2.7 2017-03-15 doi.org/10.1073/pnas.1617446114

A 2D representation of the interactions of BMA in 5TE3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 7.6 0 No No 0 4 1 2
H:H:?1 H:H:?2 38.74 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 25.68 0 No No 0 0 1 0
H:H:?3 H:H:?6 47.27 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength36.48
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5WKT A Sensory Opsins Rhodopsin Bos Taurus Octyl-Beta-D-Glucopyranoside - Gt(CT) 3.2 2017-12-13 doi.org/10.1038/nprot.2017.135

A 2D representation of the interactions of BMA in 5WKT
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 34.31 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
H:H:?3 H:H:?4 45.8 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub0.00
Average Interaction Strength38.31
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FJ3 B1 Peptide Parathyroid Hormone PTH1 Homo Sapiens PTH - - 2.5 2018-11-21 doi.org/10.1038/s41594-018-0151-4

A 2D representation of the interactions of BMA in 6FJ3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 H:H:?3 43.17 2 No No 0 0 2 1
H:H:?2 H:H:?5 27.98 2 No Yes 0 0 2 2
H:H:?3 H:H:?4 33.39 2 No No 0 0 1 0
H:H:?3 H:H:?5 5.33 2 No Yes 0 0 1 2
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength33.39
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6FJ3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?6 H:H:?7 29.89 3 Yes No 0 0 2 1
H:H:?6 H:H:?9 22.65 3 Yes Yes 0 0 2 2
H:H:?7 H:H:?8 30.82 3 No No 0 0 1 0
H:H:?7 H:H:?9 9.33 3 No Yes 0 0 1 2
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength30.82
Average Nodes In Shell4.00
Average Hubs In Shell2.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell3.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6FJ3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?10 H:H:?11 42.06 0 Yes No 0 0 2 1
H:H:?11 H:H:?12 34.67 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength34.67
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FK6 A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473033 - 2.36 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FK6
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 36.53 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 34.67 0 No No 0 0 1 0
H:H:?3 H:H:?5 50.23 0 No No 0 0 0 1
H:H:?3 H:H:?6 35.45 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength40.12
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FK7 A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473034 - 2.62 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FK7
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 8.69 0 No No 0 4 1 2
H:H:?1 H:H:?2 36.53 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
H:H:?3 H:H:?4 41.36 0 No No 0 0 0 1
H:H:?3 H:H:?5 28.07 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength33.42
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FK8 A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473035 - 2.87 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FK8
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 4.35 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.69 1 No No 0 4 1 2
H:H:?1 H:H:?2 35.42 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 34.67 1 No No 0 0 1 0
H:H:?3 H:H:?5 45.8 0 No No 0 0 0 1
H:H:?3 H:H:?6 26.59 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength35.69
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell6.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FK9 A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473036 - 2.63 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FK9
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 7.6 0 No No 0 4 1 2
H:H:?1 H:H:?2 38.74 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
H:H:?3 H:H:?4 44.32 0 No No 0 0 0 1
H:H:?3 H:H:?5 29.55 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength34.90
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FKA A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473037 - 2.7 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FKA
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 7.6 0 No No 0 4 1 2
H:H:?1 H:H:?2 36.53 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
H:H:?3 H:H:?4 42.84 0 No No 0 0 0 1
H:H:?3 H:H:?5 29.55 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength34.40
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FKB A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473038 - 3.03 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FKB
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 H:H:?3 33.21 1 Yes No 0 0 2 1
H:H:?3 H:H:?4 17.98 0 No No 0 0 1 0
H:H:?4 H:H:?5 38.41 0 No No 0 0 0 1
H:H:?4 H:H:?6 36.93 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength31.11
Average Nodes In Shell5.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FKC A Sensory Opsins Rhodopsin Bos Taurus - PubChem 132473039 - 2.46 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FKC
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 36.53 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 0 No No 0 0 1 0
H:H:?3 H:H:?4 38.41 0 No No 0 0 0 1
H:H:?3 H:H:?5 28.07 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.43
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell5.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FKD A Sensory Opsins Rhodopsin Bos Taurus - PubChem 137349183 - 2.49 2018-04-04 doi.org/10.1073/pnas.1718084115

A 2D representation of the interactions of BMA in 6FKD
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 3.26 2 Yes No 0 4 2 2
H:H:?2 R:R:R21 6.52 2 No No 0 4 1 2
H:H:?1 H:H:?2 40.96 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 30.82 2 No No 0 0 1 0
H:H:?3 H:H:?4 44.32 0 No No 0 0 0 1
H:H:?3 H:H:?5 32.5 0 No No 0 0 0 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub0.00
Average Interaction Strength35.88
Average Nodes In Shell6.00
Average Hubs In Shell1.00
Average Links In Shell6.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6MEO A Protein Chemokine CCR5 Homo Sapiens Envelope Glycoprotein Gp160; T-Cell Surface Glycoprotein Cd4 - - 3.9 2018-12-12 doi.org/10.1038/s41586-018-0804-9

A 2D representation of the interactions of BMA in 6MEO
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?5 H:H:?6 36.78 1 Yes No 0 0 2 1
H:H:?6 H:H:?7 28.57 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.57
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6MEO
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?8 H:H:?9 31.2 3 Yes Yes 0 0 2 1
H:H:?10 H:H:?9 32.47 0 No Yes 0 0 0 1
H:H:?9 L:L:E209 10.7 0 Yes No 0 7 1 2
H:H:?9 L:L:S439 8.08 0 Yes No 0 4 1 2
H:H:?10 H:H:?31 38.83 0 No No 0 0 0 1
H:H:?31 L:L:T207 15.21 0 No No 0 5 1 2
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub1.00
Average Interaction Strength35.65
Average Nodes In Shell7.00
Average Hubs In Shell2.00
Average Links In Shell6.00
Average Links Mediated by Hubs In Shell4.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6MEO
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?16 H:H:?18 4.46 0 No No 0 0 2 1
H:H:?17 H:H:?18 32.32 16 Yes No 0 0 2 1
H:H:?18 H:H:?19 29.87 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength29.87
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6MET A Protein Chemokine CCR5 Homo Sapiens Envelope Glycoprotein Gp160; T-Cell Surface Glycoprotein Cd4 - - 4.5 2018-12-12 doi.org/10.1038/s41586-018-0804-9

A 2D representation of the interactions of BMA in 6MET
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?3 H:H:?4 36.78 1 Yes No 0 0 2 1
H:H:?4 H:H:?5 28.57 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength28.57
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6MET
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?6 H:H:?7 31.2 2 Yes Yes 0 0 2 1
H:H:?7 H:H:?8 32.47 2 Yes No 0 0 1 0
H:H:?31 H:H:?7 3.84 2 No Yes 0 0 1 1
H:H:?7 L:L:E209 10.7 2 Yes No 0 7 1 2
H:H:?7 L:L:S439 8.08 2 Yes No 0 4 1 2
H:H:?29 H:H:?8 38.83 0 No No 0 0 1 0
H:H:?31 H:H:?8 22.4 2 No No 0 0 1 0
H:H:?29 H:H:?30 42.74 0 No Yes 0 0 1 2
H:H:?29 L:L:T207 15.21 0 No No 0 5 1 2
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub1.00
Average Interaction Strength31.23
Average Nodes In Shell9.00
Average Hubs In Shell3.00
Average Links In Shell9.00
Average Links Mediated by Hubs In Shell6.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of BMA in 6MET
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?14 H:H:?16 4.46 0 No No 0 0 2 1
H:H:?15 H:H:?16 32.32 22 Yes No 0 0 2 1
H:H:?16 H:H:?17 29.87 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength29.87
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6NWE A Sensory Opsins Rhodopsin Bos Taurus Octyl-Beta-D-Glucopyranoside - Gt(CT) 2.71 2020-02-12 To be published

A 2D representation of the interactions of BMA in 6NWE
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?2 R:R:R21 6.52 0 No No 0 4 1 2
H:H:?1 H:H:?2 40.96 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 29.54 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength29.54
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell3.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6PEL A Sensory Opsins Rhodopsin Bos Taurus - Citronellol Gt(CT) 3.19 2020-06-24 To be published

A 2D representation of the interactions of BMA in 6PEL
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 5.43 2 Yes No 0 4 2 2
H:H:?2 R:R:R21 7.6 2 No No 0 4 1 2
H:H:?1 H:H:?2 34.31 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 26.97 2 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength26.97
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6PGS A Sensory Opsins Rhodopsin Bos Taurus - Geraniol Gt(CT) 2.9 2020-07-01 To be published

A 2D representation of the interactions of BMA in 6PGS
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 5.43 1 Yes No 0 4 2 2
H:H:?2 R:R:R21 9.78 1 No No 0 4 1 2
H:H:?1 H:H:?2 40.96 1 Yes No 0 0 2 1
H:H:?2 H:H:?3 29.54 1 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength29.54
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6PH7 A Sensory Opsins Rhodopsin Bos Taurus - Nerol Gt(CT) 2.9 2020-07-01 To be published

A 2D representation of the interactions of BMA in 6PH7
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 R:R:R21 4.35 2 Yes No 0 4 2 2
H:H:?2 R:R:R21 8.69 2 No No 0 4 1 2
H:H:?1 H:H:?2 32.1 2 Yes No 0 0 2 1
H:H:?2 H:H:?3 33.39 2 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength33.39
Average Nodes In Shell4.00
Average Hubs In Shell1.00
Average Links In Shell4.00
Average Links Mediated by Hubs In Shell2.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6UO8 C Aminoacid GABAB GABAB1; GABAB2 Homo Sapiens SKF97541 GS39783 - 3.63 2020-06-10 doi.org/10.1038/s41586-020-2408-4

A 2D representation of the interactions of BMA in 6UO8
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?3 H:H:?4 30.99 11 No No 0 0 2 1
H:H:?4 H:H:?5 37.24 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength37.24
Average Nodes In Shell3.00
Average Hubs In Shell0.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6UO9 C Aminoacid GABAB GABAB1; GABAB2 Homo Sapiens SKF97541 - - 4.8 2020-06-10 doi.org/10.1038/s41586-020-2408-4

A 2D representation of the interactions of BMA in 6UO9
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?7 H:H:?8 34.31 0 No No 0 0 2 1
H:H:?8 H:H:?9 33.39 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength33.39
Average Nodes In Shell3.00
Average Hubs In Shell0.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell0.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8FCZ A Sensory Opsins Rhodopsin Bos Taurus 11-cis-Retinal - - 3.7 2023-08-30 doi.org/10.1038/s41467-023-40911-9

A 2D representation of the interactions of BMA in 8FCZ
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 36.78 0 Yes No 0 0 2 1
H:H:?2 H:H:?3 32.47 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.47
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8FD0 A Sensory Opsins Rhodopsin Bos Taurus - - - 3.71 2023-08-30 doi.org/10.1038/s41467-023-40911-9

A 2D representation of the interactions of BMA in 8FD0
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 33.43 0 Yes No 0 0 2 1
H:H:?2 H:H:?3 32.47 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength32.47
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8FD1 A Sensory Opsins Rhodopsin Bos Taurus - - - 4.25 2023-08-30 doi.org/10.1038/s41467-023-40911-9

A 2D representation of the interactions of BMA in 8FD1
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 36.78 6 Yes No 0 0 2 1
H:H:?2 H:H:?3 37.66 0 No No 0 0 1 0
StatisticsValue
Average Number Of Links1.00
Average Number Of Links With An Hub0.00
Average Interaction Strength37.66
Average Nodes In Shell3.00
Average Hubs In Shell1.00
Average Links In Shell2.00
Average Links Mediated by Hubs In Shell1.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links1.76
Average Number Of Links With An Hub0.05
Average Interaction Strength33.30
Average Nodes In Shell4.50
Average Hubs In Shell0.99
Average Links In Shell3.95
Average Links Mediated by Hubs In Shell1.49

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

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Location of the nodes interacting with this ligand

(Click to enlarge 🔍)