Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:V11 4.128528
2R:R:P12 4.76428
3R:R:V20 9.426526
4R:R:S22 5.415425
5R:R:P23 7.20667625
6R:R:F24 6.61833625
7R:R:Q28 7.402525
8R:R:Y29 6.2404
9R:R:Y30 8.342524
10R:R:L31 5.19333624
11R:R:F37 5.865405
12R:R:Y43 8.7925444
13R:R:I54 4.2325458
14R:R:N55 6.608559
15R:R:H65 6.97575
16R:R:L68 6.558577
17R:R:N78 6.206519
18R:R:D83 7.5075459
19R:R:F91 6.265607
20R:R:F103 5.62428
21R:R:G109 2.9475405
22R:R:E113 4.51525
23R:R:I123 5.118517
24R:R:W126 8.635615
25R:R:R135 10.6525489
26R:R:Y136 7.308597
27R:R:F148 5.385407
28R:R:T160 5.1275417
29R:R:L172 4.4025415
30R:R:R177 13.5525435
31R:R:Y178 5.91713
32R:R:P180 5.76523
33R:R:Q184 5.614523
34R:R:C187 6.8175429
35R:R:D190 8.478534
36R:R:Y191 4.41167636
37R:R:Y192 5.826535
38R:R:T193 5.4435
39R:R:H195 15.4275434
40R:R:N200 6.195434
41R:R:F203 8.59571716
42R:R:Y206 7.4725414
43R:R:H211 6.86857716
44R:R:F212 4.394108
45R:R:L216 3.085407
46R:R:Y223 9.245489
47R:R:E247 5.8125117
48R:R:Y268 5.704506
49R:R:F283 9.168534
50R:R:P285 4.215423
51R:R:M288 4.5575434
52R:R:Y301 5.0075445
53R:R:F313 8.215408
54H:H:?1 17.092520
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:D190 R:R:N200 27.80648.08YesYes344
2R:R:N200 R:R:S176 32.96964.47YesNo045
3R:R:F203 R:R:S176 33.689211.89YesNo065
4R:R:F203 R:R:P171 42.77325.78YesNo165
5R:R:P171 R:R:Y178 42.51769.74NoYes153
6R:R:G114 R:R:Y178 73.04745.79NoYes053
7R:R:E113 R:R:G114 71.97564.91YesNo055
8R:R:C187 R:R:E113 50.79094.56YesYes295
9R:R:C187 R:R:P180 52.70035.65YesYes293
10R:R:P180 R:R:P23 27.0465.84YesYes235
11R:R:P23 R:R:V11 15.55433.53YesYes258
12R:R:V11 R:R:V20 14.23664.81YesYes286
13R:R:F203 R:R:I189 42.77543.77YesNo064
14R:R:I189 R:R:Y178 42.29643.63NoYes043
15H:H:?1 R:R:V20 10.0576.66YesYes206
16R:R:E113 R:R:F103 16.26525.83YesYes258
17R:R:F103 R:R:F24 13.73625.36YesYes285
18R:R:P180 R:R:Q184 28.68056.32YesYes233
19R:R:L31 R:R:Q184 13.09513.99YesYes243
20R:R:Q28 R:R:Y30 16.328613.53YesYes254
21R:R:V19 R:R:Y30 16.17183.79NoYes034
22R:R:T17 R:R:V19 12.13184.76NoNo063
23R:R:F103 R:R:G109 19.71241.51YesYes085
24R:R:F105 R:R:G109 17.43471.51NoYes075
25R:R:F105 R:R:V104 15.67037.87NoNo074
26R:R:V104 R:R:Y102 14.76078.83NoNo044
27R:R:P27 R:R:Y102 14.35155.56NoNo084
28R:R:P27 R:R:Y29 14.0398.34NoYes084
29R:R:F37 R:R:Y29 13.53975.16YesYes054
30R:R:C185 R:R:F37 12.76654.19NoYes055
31R:R:F203 R:R:Y206 49.97694.13YesYes164
32R:R:H211 R:R:Y206 50.52899.8YesYes164
33R:R:H211 R:R:W126 1008.46YesYes165
34R:R:L125 R:R:W126 65.74815.69NoYes075
35R:R:L125 R:R:W265 65.393718.22NoNo078
36R:R:C264 R:R:W265 59.420711.75NoNo088
37R:R:C264 R:R:Y301 34.70724.03NoYes485
38R:R:T297 R:R:Y301 11.37254.99NoYes465
39R:R:F91 R:R:M44 13.26693.73YesNo077
40R:R:M44 R:R:T94 12.86966.02NoNo077
41R:R:L40 R:R:T94 12.58184.42NoNo057
42R:R:F203 R:R:M207 50.24436.22YesNo165
43R:R:H211 R:R:M207 49.7175.25YesNo165
44R:R:C185 R:R:S98 12.62693.44NoNo055
45R:R:C264 R:R:S298 24.4013.44NoNo489
46R:R:N302 R:R:S298 23.97587.45NoNo499
47R:R:L128 R:R:N302 47.99344.12NoNo089
48R:R:L128 R:R:L79 40.1972.77NoNo089
49R:R:D83 R:R:L79 39.25625.43YesNo099
50R:R:D83 R:R:N55 37.772113.46YesYes599
51R:R:N302 R:R:Y301 24.91014.65NoYes495
52R:R:A80 R:R:N55 32.40164.69NoYes099
53R:R:A80 R:R:T58 31.31373.36NoNo099
54R:R:I307 R:R:T58 30.223712.16NoNo079
55R:R:F313 R:R:I307 29.13153.77YesNo087
56R:R:F313 R:R:L68 20.334210.96YesYes087
57R:R:H65 R:R:L68 11.37043.86YesYes757
58R:R:E134 R:R:F148 15.043110.49NoYes087
59R:R:E134 R:R:V130 15.70254.28NoNo087
60R:R:I75 R:R:V130 17.66776.14NoNo077
61R:R:I75 R:R:S127 32.49076.19NoNo078
62R:R:S127 R:R:T160 31.91626.4NoYes187
63R:R:T160 R:R:W126 37.50043.64YesYes175
64R:R:I75 R:R:L131 21.70774.28NoNo079
65R:R:L128 R:R:Y306 19.571711.72NoNo089
66R:R:L131 R:R:R135 21.301817.01NoYes099
67R:R:M257 R:R:R135 10.52853.72NoYes889
68R:R:M257 R:R:Y306 13.168113.17NoNo089
69R:R:R135 R:R:Y223 10.03778.23YesYes899
70R:R:F148 R:R:H152 10.36745.66YesNo075
71R:R:V254 R:R:Y223 11.71737.57NoYes089
72R:R:V227 R:R:V254 11.04394.81NoNo058
73R:R:K231 R:R:V227 10.36953.04NoNo055
74R:R:D190 R:R:Y192 21.19444.6YesYes345
75R:R:F261 R:R:L216 10.6813.65NoYes097
76R:R:F261 R:R:W265 12.13294.01NoNo098
77R:R:I256 R:R:I305 14.30214.42NoNo058
78R:R:I305 R:R:Y306 17.46376.04NoNo089
79R:R:A299 R:R:D83 10.95273.09NoYes099
80R:R:A299 R:R:F91 10.82922.77NoYes097
81R:R:L40 R:R:S98 12.44327.51NoNo055
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:L131 R:R:R135 17.01 0 No Yes 9 9 2 1
R:R:R135 R:R:Y223 8.23 8 Yes Yes 9 9 1 2
R:R:M257 R:R:R135 3.72 8 No Yes 8 9 2 1
L:L:M76 R:R:R135 13.65 0 No Yes 0 9 0 1
R:R:M257 R:R:Y223 13.17 8 No Yes 8 9 2 2
R:R:E249 R:R:R252 5.82 0 No No 7 7 1 2
L:L:L78 R:R:E249 6.63 0 No No 0 7 0 1
R:R:F313 R:R:N310 8.46 0 Yes No 8 8 2 1
L:L:G77 R:R:N310 6.79 0 No No 0 8 0 1
L:L:I73 R:R:K141 2.91 0 No No 0 6 0 1
R:R:K141 R:R:P142 1.67 0 No No 6 8 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

ShowSimilarityNetwork TypeNameLigandDescription
22.22Single5EE7MK08935EE7-Glucagon-MK0893
20.00Single5VEXNNC06405VEX-GLP-1-NNC0640
20.00Single6KK7PF-063722226KK7-GLP-1-PF-06372222
18.18Single6KJVPF-063722226KJV-GLP-1-PF-06372222
18.18Single6KK1PF-063722226KK1-GLP-1-PF-06372222
16.67Single5X7DCmpd-155X7D-β2-S-Carazolol-Cmpd-15
16.67Single5XEZNNC06405XEZ-Glucagon-NNC0640
15.38Single5XF1NNC06405XF1-Glucagon-NNC0640
15.38Single8JPCSBI-553; GDP; Mg8JPC-NTS1-Neurotensin-(8-13)-SBI-553; GDP; Mg-Gq; GRK2
15.38Single8JPFSBI-5538JPF-NTS1-Neurotensin-SBI-553
13.33Single8JPBSBI-553; GDP; Mg8JPB-NTS1-Neurotensin-(8-13)-SBI-553; GDP; Mg-Gq; GRK2
12.50Single5LWEVercirnon5LWE-CCR9-Vercirnon
12.50Single8TB7PubChem 1685102188TB7-GPR61-PubChem 168510218
12.50Single8ZYUSBI-5538ZYU-NTS1-Neurotensin peptide 8-13-SBI-553-Arrestin2
12.50Single8ZYYSBI-5538ZYY-NTS1-Neurotensin peptide 8-13-SBI-553-Arrestin2
11.76Single6LN2PF-063722226LN2-GLP-1-PF-06372222
10.53Single8ZYTSBI-5538ZYT-NTS1-Neurotensin peptide 8-13-SBI-553-Arrestin2
10.00Single8XQPAristolochic acid A8XQP-TAS2R14-Cholesterol-Aristolochic acid A-Gt3/β1/γ1
9.09Single5T1APubChem 120931705T1A-CCR2-BMS-681-PubChem 12093170
9.09Single7LJDMevidalen7LJD-D1-Dopamine-Mevidalen-Gs/β1/γ1
9.09Single7X2FMevidalen7X2F-D1-Dopamine-Mevidalen-Gs/β1/γ2
9.09Single9CM3Compound 1879CM3-FFA2-TUG-1375-Compound 187-chim(NtGi1L-Gs-CtGq)/β1/γ2
8.33Single5VEWPF-063722225VEW-GLP-1-PF-06372222
8.33Single7LJCMevidalen7LJC-D1-SKF-81297-Mevidalen-Gs/β1/γ2
8.33Single8G2YLPC8G2Y-ADGRF1-LPC-chim(Gs-CtGq)/β1/γ2
8.33Single8XQNAristolochic acid A8XQN-TAS2R14-Cholesterol-Aristolochic acid A-Gi1/β1/γ1
8.33Single8XQRFlufenamic acid8XQR-TAS2R14-Flufenamic acid-Gt3/β1/γ1
7.69Single6N48PubChem 1384542566N48-β2-BI167107-PubChem 138454256
7.69Single7WU3K6G7WU3-ADGRF1-K6G-Gs/β1/γ2
7.69Single8RQLFlufenamic acid8RQL-TAS2R14-Flufenamic acid-Flufenamic acid-chim(NtGi1-Gt3)/β1/γ2
7.69Single8XQOAristolochic acid A8XQO-TAS2R14-Cholesterol-Aristolochic acid A-Gi1/β1/γ1
7.69Single8XQSFlufenamic acid8XQS-TAS2R14-Cholesterol-Flufenamic acid-Gi1/β1/γ1
7.14Single6QZHCmp2105; Na6QZH-CCR7-Cmp2105; Na
7.14Single8XQLAristolochic acid A8XQL-TAS2R14-Cholesterol-Aristolochic acid A-Gt3/β1/γ1
6.67Single6LFLPubChem 1534669966LFL-CXCR2-PubChem 153466996
6.67Single7WU5K6G7WU5-ADGRF1-K6G-Gi1/β1/γ2
6.67Single8GW8PCO3718GW8-PTH1-PCO371-Gs/β1/γ2
6.25Single7WU4K6G7WU4-ADGRF1-K6G-Gi1/β1/γ2
6.25Single8J20AR4206268J20-FFA3-Valeric acid-AR420626-Gi1/β1/γ2
5.88Single8JR9PCO3718JR9-PTH1-PCO371-chim(NtGi1-Gs)/β1/γ2
5.00Single8FN0SBI-5538FN0-NTS1-Neurotensin/Neuromedin-N-SBI-553-chim(NtGi1-Go)/β1/γ2
4.00Single3VG9Antibody3VG9-A2A-ZM-241385-Antibody
3.57Single3VGAAntibody3VGA-A2A-ZM-241385-Antibody

PDB Summary
PDB 4PXF
Class A
SubFamily Sensory
Type Opsins
SubType Rhodopsin
Species Bos Taurus
Ligand Octyl-Beta-D-Glucopyranoside
Other Ligand(s) -
Protein Partners Arrestin1 Finger Loop
PDB Resolution 2.75
Date 2014-09-17
D.O.I. doi.org/10.1038/ncomms5801
Net Summary
Imin 3.44
Number of Linked Nodes 322
Number of Links 375
Number of Hubs 54
Number of Links mediated by Hubs 200
Number of Communities 12
Number of Nodes involved in Communities 89
Number of Links involved in Communities 128
Path Summary
Number Of Nodes in MetaPath 82
Number Of Links MetaPath 81
Number of Shortest Paths 144562
Length Of Smallest Path 3
Average Path Length 18.8383
Length of Longest Path 37
Minimum Path Strength 1.345
Average Path Strength 6.61443
Maximum Path Strength 34.7033
Minimum Path Correlation 0.7
Average Path Correlation 0.950511
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 51.9521
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.0918
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• response to light stimulus   • response to stimulus   • response to radiation   • response to abiotic stimulus   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • signaling   • biological regulation   • cellular process   • signal transduction   • cell communication   • negative adaptation of signaling pathway   • import into cell   • receptor internalization   • negative regulation of signaling   • transport   • negative regulation of biological process   • desensitization of G protein-coupled receptor signaling pathway   • regulation of signal transduction   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • vesicle-mediated transport   • localization   • negative regulation of cellular process   • regulation of G protein-coupled receptor signaling pathway   • G protein-coupled receptor internalization   • regulation of signaling   • negative regulation of response to stimulus   • negative regulation of signal transduction   • establishment of localization   • regulation of response to stimulus   • adaptation of signaling pathway   • regulation of cell communication   • G protein-coupled receptor signaling pathway   • receptor-mediated endocytosis   • endocytosis   • cellular anatomical structure   • membrane   • photoreceptor inner segment   • intracellular anatomical structure   • cytoplasm   • cytosol   • membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • photoreceptor inner segment   • intracellular anatomical structure   • cytoplasm   • cytosol   • membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle   • opsin binding   • protein binding   • binding   • arrestin family protein binding   • G protein-coupled photoreceptor activity   • molecular transducer activity   • photoreceptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • vitamin binding   • retinal binding   • isoprenoid binding   • retinoid binding   • lipid binding   • 11-cis retinal binding   • small molecule binding   • G-protein alpha-subunit binding   • GTPase regulator activity   • enzyme regulator activity   • guanyl-nucleotide exchange factor activity   • nucleoside-triphosphatase regulator activity   • molecular function regulator activity   • cation binding   • transition metal ion binding   • zinc ion binding   • ion binding   • metal ion binding   • identical protein binding   • multicellular organismal process   • rod bipolar cell differentiation   • cellular developmental process   • sensory organ development   • retina development in camera-type eye   • visual system development   • neural retina development   • neurogenesis   • multicellular organism development   • eye morphogenesis   • neuron differentiation   • cell differentiation   • anatomical structure development   • animal organ morphogenesis   • sensory system development   • system development   • developmental process   • camera-type eye morphogenesis   • eye development   • animal organ development   • nervous system development   • retinal bipolar neuron differentiation   • glutamatergic neuron differentiation   • generation of neurons   • retina morphogenesis in camera-type eye   • anatomical structure morphogenesis   • sensory organ morphogenesis   • camera-type eye development   • cellular process   • cellular response to stimulus   • response to light stimulus   • response to stimulus   • cellular response to light stimulus   • response to radiation   • response to abiotic stimulus   • cellular response to radiation   • cellular response to abiotic stimulus   • cellular response to environmental stimulus   • regulation of cellular process   • signaling   • detection of abiotic stimulus   • cell communication   • signal transduction   • detection of light stimulus   • phototransduction   • detection of external stimulus   • regulation of biological process   • biological regulation   • detection of visible light   • response to external stimulus   • detection of stimulus   • G protein-coupled receptor signaling pathway   • G protein-coupled opsin signaling pathway   • phototransduction, visible light   • response to light intensity   • podosome assembly   • organelle assembly   • protein-containing complex organization   • membraneless organelle assembly   • cellular component organization   • cellular component biogenesis   • organelle organization   • cellular component assembly   • protein-containing complex assembly   • cellular component organization or biogenesis   • biosynthetic process   • metabolic process   • macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • multicellular organismal-level homeostasis   • homeostatic process   • anatomical structure homeostasis   • tissue homeostasis   • retina homeostasis   • photoreceptor cell maintenance   • absorption of visible light   • light absorption   • microtubule cytoskeleton organization   • microtubule-based process   • cytoskeleton organization   • sensory perception of light stimulus   • system process   • sensory perception   • nervous system process   • visual perception   • thermoception   • sensory perception of temperature stimulus   • detection of temperature stimulus involved in sensory perception   • response to temperature stimulus   • detection of temperature stimulus involved in thermoception   • detection of temperature stimulus   • detection of stimulus involved in sensory perception   • taxis   • thermotaxis   • locomotion   • cell-cell junction   • anchoring junction   • cell junction   • photoreceptor disc membrane   • organelle membrane   • cell periphery   • protein-containing complex   • plasma membrane protein complex   • plasma membrane   • plasma membrane signaling receptor complex   • G protein-coupled receptor complex   • membrane protein complex   • receptor complex   • sperm midpiece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • photoreceptor inner segment membrane   • plasma membrane region   • ciliary membrane   • photoreceptor outer segment membrane   • bounding membrane of organelle   • cell projection membrane   • Golgi membrane   • Golgi apparatus   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • outer membrane   • sperm head   • sperm head plasma membrane   • sperm plasma membrane   • rod photoreceptor outer segment
SCOP2Domain Identifier• G protein-coupled receptor-like
SCOP2Family Identifier• G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylglucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeBMA
PDB ResiduesH:H:?3
Environment DetailsOpen EMBL-EBI Page
CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodePLM
PDB ResiduesH:H:?4
Environment DetailsOpen EMBL-EBI Page
CodePLM
NamePalmitic Acid
SynonymsPalmitinsäure
Identifier
FormulaC16 H32 O2
Molecular Weight256.424
SMILES
PubChem985
Formal Charge0
Total Atoms50
Total Chiral Atoms0
Total Bonds49
Total Aromatic Bonds0

CodeMAN
PDB ResiduesH:H:?5
Environment DetailsOpen EMBL-EBI Page
CodeMAN
Namealpha-D-mannopyranose
Synonymsalpha-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem185698
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>4PXF_Chain_R
NGTEGPNFY VPFSNKTGV VRSPFEAPQ YYLAEPWQF SMLAAYMFL 
LIMLGFPIN FLTLYVTVQ HKKLRTPLN YILLNLAVA DLFMVFGGF 
TTTLYTSLH GYFVFGPTG CNLEGFFAT LGGEIALWS LVVLAIERY 
VVVCKPMSN FRFGENHAI MGVAFTWVM ALACAAPPL VGWSRYIPE 
GMQCSCGID YYTPHEETN NESFVIYMF VVHFIIPLI VIFFCYGQL 
VFTVKEAAA QQQESATTQ KAEKEVTRM VIIMVIAFL ICWLPYAGV 
AFYIFTHQG SDFGPIFMT IPAFFAKTS AVYNPVIYI MMNKQFRNC 
MVTTLCCGK N


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8P13ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.22024-11-20To be published
8P13 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.22024-11-20To be published
8P15ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.92024-11-20To be published
8P15 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.92024-11-20To be published
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-04doi.org/10.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-04doi.org/10.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-04doi.org/10.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-04doi.org/10.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-04doi.org/10.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-04doi.org/10.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-04doi.org/10.1073/pnas.1718084115
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-04doi.org/10.1073/pnas.1718084115
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6PH7 (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Nerol2.92020-07-01To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PGS (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Geraniol2.92020-07-01To be published
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PEL (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Citronellol3.192020-06-24To be published
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.62006-09-02doi.org/10.1002/anie.200600595
4J4QASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-Gt(CT)2.652013-10-30doi.org/10.1002/anie.201302374
4J4Q (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-2.652013-10-30doi.org/10.1002/anie.201302374
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-19doi.org/10.1016/j.bpj.2010.08.003
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-09doi.org/10.1016/j.cell.2017.07.002
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-12doi.org/10.1016/j.jmb.2004.07.044
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-20doi.org/10.1016/j.jmb.2004.08.090
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-25doi.org/10.1016/j.jmb.2007.03.007
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82011-08-17doi.org/10.1016/j.jmb.2011.08.044
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-17doi.org/10.1016/j.jmb.2011.08.044
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OY9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
4X1HASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-Gt(CT)2.292015-11-04doi.org/10.1016/j.str.2015.09.015
4X1H (No Gprot) ASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-2.292015-11-04doi.org/10.1016/j.str.2015.09.015
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-04doi.org/10.1021/bi0155091
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-24doi.org/10.1038/embor.2013.44
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-08doi.org/10.1038/embor.2013.44
4BEY (No Gprot) ASensoryOpsinsRhodopsinBos taurus--2.92013-05-08doi.org/10.1038/embor.2013.44
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-13doi.org/10.1038/nature06925
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-24doi.org/10.1038/nature07063
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-23doi.org/10.1038/nature07330
3DQB (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.22008-09-23doi.org/10.1038/nature07330
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.852011-03-09doi.org/10.1038/nature09789
3PQR (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.852011-03-09doi.org/10.1038/nature09789
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--32011-03-09doi.org/10.1038/nature09789
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)32011-03-16doi.org/10.1038/nature09795
2X72 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-32011-03-16doi.org/10.1038/nature09795
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-29doi.org/10.1038/nature14656
4PXFASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Arrestin1 Finger Loop2.752014-09-17doi.org/10.1038/ncomms5801
5WKTASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)3.22017-12-13doi.org/10.1038/nprot.2017.135
5WKT (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-3.22017-12-13doi.org/10.1038/nprot.2017.135
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-30doi.org/10.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-30doi.org/10.1038/s41467-023-40911-9
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-30doi.org/10.1038/s41467-023-40911-9
9EPPASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPP (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.152024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQ (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.152024-10-23doi.org/10.1038/s41467-024-53208-2
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/β1/γ24.52018-06-20doi.org/10.1038/s41586-018-0215-y
6CMO (No Gprot) ASensoryOpsinsRhodopsinHomo sapiens--4.52018-06-20doi.org/10.1038/s41586-018-0215-y
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK15.82021-07-07doi.org/10.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK172021-07-07doi.org/10.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK14.12021-07-07doi.org/10.1038/s41586-021-03721-x
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK142021-07-07doi.org/10.1038/s41586-021-03721-x
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-23doi.org/10.1038/sdata.2016.21
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.82006-08-22doi.org/10.1073/pnas.0601765103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-17doi.org/10.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-17doi.org/10.1073/pnas.0608022103
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-17doi.org/10.1073/pnas.0608022103
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-15doi.org/10.1073/pnas.082666399
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)3.32012-01-25doi.org/10.1073/pnas.1114089108
4A4M (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32012-01-25doi.org/10.1073/pnas.1114089108
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside--2.72017-03-15doi.org/10.1073/pnas.1617446114
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-15doi.org/10.1073/pnas.1617446114
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-03doi.org/10.1073/pnas.1902192116
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-06doi.org/10.1074/jbc.C800040200
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-21doi.org/10.1074/jbc.RA119.010089
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-05doi.org/10.1107/S0907444908017162
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-05doi.org/10.1107/S0907444908017162
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Go3.122018-10-03doi.org/10.1126/sciadv.aat7052
6FUF (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.122018-10-03doi.org/10.1126/sciadv.aat7052
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-04doi.org/10.1126/science.289.5480.739
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82015-06-17doi.org/10.1371/journal.pone.0126970
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.32016-08-10doi.org/10.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.812016-08-10doi.org/10.15252/embr.201642671
5EN0 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.812016-08-10doi.org/10.15252/embr.201642671
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-30doi.org/10.1529/biophysj.107.108225
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gi1/β1/γ14.382019-07-10doi.org/10.7554/eLife.46041
6QNO (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.382019-07-10doi.org/10.7554/eLife.46041
9EPRASensoryOpsinsRhodopsinHasarius adansoniRetinal-Gi1/β1/γ24.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPR (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoniRetinal-4.92024-10-30doi.org/10.1038/s41467-024-53208-2
6NWEASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6NWE (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-2.712020-02-12To be published
8P12ASensoryOpsinsRhodopsinBos taurus--Gi1/β1/γT13.212024-11-20To be published
8P12 (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.212024-11-20To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 4PXF.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.