Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y10 5.482517
2R:R:V11 6.1418
3R:R:V20 7.258516
4R:R:P23 9.23415
5R:R:F24 6.8854215
6R:R:Y30 8.34514
7R:R:Y43 6.2754224
8R:R:N78 4.623336119
9R:R:F103 5.2975408
10R:R:G109 4.4225405
11R:R:E113 5.725415
12R:R:F115 5.69516
13R:R:E122 9.04596
14R:R:I123 3.7965117
15R:R:L125 8.2975497
16R:R:W126 6.745695
17R:R:Y136 6.445267
18R:R:F148 5.914237
19R:R:E150 4.7125402
20R:R:C167 7.2625495
21R:R:P171 8.2575415
22R:R:R177 8.06515
23R:R:Y178 7.30167613
24R:R:I179 6.675411
25R:R:P180 5.384513
26R:R:M183 2.8275402
27R:R:I189 4.7875414
28R:R:D190 9.37514
29R:R:Y191 5.486516
30R:R:Y192 8.25615
31R:R:T193 6.076515
32R:R:H195 11.5625414
33R:R:N200 4.865414
34R:R:F203 6.97416
35R:R:H211 10.6967696
36R:R:F212 5.64408
37R:R:Y223 6.066509
38R:R:Q237 6.3565
39R:R:E247 3.922567
40R:R:W265 11.4325408
41R:R:F283 7.4275414
42R:R:F294 5.475407
43R:R:Y306 10.1154249
44R:R:I307 3.4825407
45R:R:F313 6.4225408
46A:A:K35 5.1675409
47A:A:L38 5.64408
48A:A:K54 4.262507
49A:A:E63 6.715402
50A:A:E65 9.26254148
51A:A:I81 3.005406
52A:A:F95 7.215404
53A:A:R100 7.10754285
54A:A:F118 3.54401
55A:A:D133 5.815408
56A:A:L148 3.822507
57A:A:Y154 8.09667659
58A:A:Y155 5.702557
59A:A:D158 10.8325455
60A:A:R161 11.906558
61A:A:I162 10.6025457
62A:A:Y167 10.014558
63A:A:P169 7.6925459
64A:A:D173 7.482559
65A:A:R176 7.5875456
66A:A:E186 8.97754149
67A:A:H188 14.434143
68A:A:F191 11.38754135
69A:A:F196 9.0865137
70A:A:K197 9.8054146
71A:A:D200 7.4075409
72A:A:R208 5.0485179
73A:A:K209 8.08628
74A:A:K210 9.3475429
75A:A:F223 4.14409
76A:A:F259 5.6656179
77A:A:K271 3.775475
78A:A:Y287 11.454327
79A:A:Y296 5.8075474
80A:A:F307 4.31408
81A:A:E318 5.166504
82A:A:Y320 6.63833667
83A:A:T324 7.7675479
84A:A:T329 4.2175409
85A:A:F336 8.843336138
86A:A:V342 3.1875467
87B:B:T29 6.75754153
88B:B:I33 3.8275403
89B:B:R48 6.39537
90B:B:R49 6.7075437
91B:B:H54 8.875439
92B:B:K78 8.39408
93B:B:I80 7.414538
94B:B:I81 4.9525487
95B:B:K89 10.1175439
96B:B:W99 6.9475409
97B:B:Y105 4.252586
98B:B:N110 10.7154164
99B:B:Y111 7.1285164
100B:B:Y124 4.445486
101B:B:E138 8.0925406
102B:B:H142 10.415429
103B:B:Y145 7.87333628
104B:B:L146 3.9175407
105B:B:C148 4.6175446
106B:B:F151 5.922867169
107B:B:L152 4.99443
108B:B:N155 5.65254343
109B:B:S160 4.7975446
110B:B:G162 4.8275429
111B:B:D163 10.7425429
112B:B:W169 9.50333628
113B:B:F180 11.585447
114B:B:H183 7.55857749
115B:B:D186 3.675429
116B:B:M188 5.0375428
117B:B:L190 5.4125445
118B:B:F199 9.34549
119B:B:S201 4.614549
120B:B:D205 6.208549
121B:B:S207 5.5725445
122B:B:K209 10.14546
123B:B:L210 6.0475405
124B:B:W211 10.4767648
125B:B:Q220 8.77254377
126B:B:H225 9.32875829
127B:B:S227 5.68426
128B:B:D228 8.846529
129B:B:F235 10.8754196
130B:B:P236 9.22754197
131B:B:F241 6.225406
132B:B:D246 8.7225429
133B:B:D247 9.44667629
134B:B:T249 6.3526
135B:B:R251 10.54528
136B:B:F253 6.406526
137B:B:L261 6.484155
138B:B:M262 7.766676154
139B:B:Y264 6.224155
140B:B:I269 4.9654124
141B:B:R283 10.5865189
142B:B:Y289 7.026676127
143B:B:V296 5.0175405
144B:B:W297 7.45254128
145B:B:R304 8.154125
146B:B:L308 9.96754107
147B:B:H311 8.254109
148B:B:L318 4.524336
149B:B:D323 8.1754207
150B:B:W332 16.9145309
151B:B:D333 8.80254109
152B:B:K337 7.065106
153B:B:W339 11.30754109
154B:B:N340 7.716539
155G:G:P52 6.624535
156G:G:I57 6.945406
157G:G:N62 10.1575439
158G:G:F64 11.92537
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:I179 R:R:Y192 25.33317.25YesYes115
2R:R:I179 R:R:P180 24.88083.39YesYes113
3R:R:Y191 R:R:Y192 28.80639.93YesYes165
4R:R:I189 R:R:Y191 30.70464.84YesYes146
5R:R:I189 R:R:P171 33.87413.39YesYes145
6R:R:P171 R:R:Y178 39.054819.47YesYes153
7R:R:F115 R:R:Y178 19.90294.13YesYes163
8R:R:A168 R:R:F115 20.9824.16NoYes076
9R:R:A168 R:R:L119 58.50123.15NoNo075
10R:R:A164 R:R:L119 58.77393.15NoNo085
11R:R:A164 R:R:I123 58.913.25NoYes087
12R:R:I123 R:R:N78 59.81134.25YesYes1179
13R:R:T118 R:R:Y178 20.17746.24NoYes043
14R:R:A168 R:R:T118 37.45173.36NoNo074
15R:R:N78 R:R:S127 60.27755.96YesNo1198
16R:R:L79 R:R:S127 61.04616.01NoNo098
17R:R:L128 R:R:L79 61.31374.15NoNo089
18R:R:C167 R:R:T118 17.81123.38YesNo054
19R:R:C167 R:R:E122 15.798510.64YesYes956
20R:R:E122 R:R:L125 14.81343.98YesYes967
21R:R:L125 R:R:W265 14.389112.53YesYes078
22R:R:L128 R:R:Y306 61.42265.86NoYes2489
23R:R:I305 R:R:Y306 64.48537.25NoYes089
24R:R:I256 R:R:I305 64.61592.94NoNo058
25R:R:I256 R:R:M253 64.74632.92NoNo058
26R:R:E249 R:R:M253 64.87666.77NoNo078
27A:A:F354 R:R:E249 65.13695.83NoNo057
28A:A:F354 R:R:K245 65.39664.96NoNo054
29R:R:K245 R:R:T242 65.52639.01NoNo044
30A:A:E318 R:R:T242 65.65585.64YesNo044
31A:A:E318 A:A:Y320 68.30058.98YesYes047
32R:R:C264 R:R:W265 12.44549.14NoYes088
33R:R:C264 R:R:S298 12.28913.44NoNo089
34R:R:T297 R:R:Y301 11.67044.99NoNo065
35B:B:R68 B:B:Y85 26.999933.95NoNo054
36B:B:Y85 G:G:P63 27.50585.56NoNo049
37G:G:N62 G:G:P63 28.01176.52YesNo099
38B:B:N340 G:G:N62 15.4525.45YesYes399
39B:B:N340 B:B:R48 21.47876.03YesYes397
40B:B:R46 B:B:R48 46.63186.4NoYes057
41B:B:R46 B:B:T47 46.8723.88NoNo053
42B:B:K337 B:B:T47 47.1124.5YesNo063
43B:B:K337 B:B:W339 49.01538.12YesYes1069
44B:B:L308 B:B:W339 50.182921.64YesYes1079
45B:B:L308 B:B:V296 66.92374.47YesYes075
46B:B:L286 B:B:V296 74.88257.45NoYes075
47B:B:L286 B:B:L318 75.31284.15NoYes076
48B:B:L318 B:B:S275 76.15137.51YesNo068
49B:B:S275 B:B:T274 76.37534.8NoNo088
50B:B:R314 B:B:T274 76.59935.17NoNo088
51B:B:D290 B:B:R314 78.914614.29NoNo068
52B:B:D290 B:B:G272 79.36015.03NoNo064
53B:B:D246 B:B:G272 79.58265.03YesNo094
54B:B:D228 B:B:D246 39.598511.98YesYes299
55A:A:K209 B:B:D228 51.220913.83YesYes289
56A:A:H213 A:A:K209 99.960715.72NoYes088
57A:A:H213 A:A:W258 1003.17NoNo085
58A:A:R208 A:A:W258 95.70886YesNo095
59A:A:R208 A:A:W211 91.59093YesNo1799
60A:A:F215 A:A:W211 93.19455.01NoNo099
61A:A:F215 B:B:W99 98.42119.02NoYes099
62A:A:K35 B:B:W99 98.58843.48YesYes099
63A:A:F199 A:A:K35 98.68127.44NoYes059
64A:A:E186 A:A:F199 49.283211.66YesNo1495
65A:A:E186 A:A:H188 49.236814.77YesYes1493
66A:A:E65 A:A:H188 98.334311.08YesYes1483
67A:A:E65 A:A:T187 80.205111.29YesNo086
68A:A:M198 A:A:T187 78.69873.01NoNo076
69A:A:K54 A:A:M198 76.94464.32YesNo077
70A:A:E58 A:A:K54 75.99576.75NoYes047
71A:A:E58 A:A:M53 75.87689.47NoNo048
72A:A:H57 A:A:M53 76.11673.94NoNo088
73A:A:H57 A:A:T324 75.875910.95NoYes089
74A:A:H322 A:A:T324 72.6116.85NoYes799
75A:A:F334 A:A:H322 72.698829.41NoNo039
76A:A:F334 A:A:Y320 72.45083.09NoYes037
77G:G:F64 G:G:N62 15.527914.5YesYes379
78B:B:R48 G:G:F64 15.88812.83YesYes377
79B:B:D246 B:B:N230 37.782213.46YesNo299
80A:A:K209 B:B:N230 37.8694.2YesNo289
81A:A:F199 A:A:K197 49.42084.96NoYes1456
82A:A:H188 A:A:K197 49.32817.03YesYes1436
83A:A:F223 A:A:L39 11.85477.31YesNo099
84A:A:P169 A:A:V174 29.05411.77YesNo098
85A:A:V174 A:A:Y69 29.86367.57NoNo085
86A:A:E65 A:A:Y69 30.02514.49YesNo085
87A:A:P169 A:A:Y167 25.441818.08YesYes598
88A:A:Y154 A:A:Y155 21.82916.95YesYes597
89A:A:R161 A:A:Y154 11.43245.14YesYes589
90A:A:R161 A:A:Y167 11.94687.2YesYes588
91A:A:D173 A:A:Y154 11.42845.75YesYes599
92A:A:D173 A:A:Y167 12.29876.9YesYes598
93A:A:I81 A:A:T77 19.0473.04YesNo065
94A:A:T77 A:A:Y155 19.39622.5NoYes057
95A:A:I127 A:A:I81 17.29582.94NoYes066
96A:A:D133 A:A:V136 11.33214.38YesNo086
97A:A:V136 A:A:W131 11.68412.45NoNo068
98A:A:L156 A:A:W131 15.898411.39NoNo078
99A:A:L156 A:A:L159 16.24875.54NoNo075
100A:A:I127 A:A:L159 16.5994.28NoNo065
101A:A:K210 B:B:Y145 12.885420.3YesYes298
102A:A:K209 A:A:K210 17.88057.18YesYes289
103B:B:M188 B:B:Y145 15.30863.59YesYes288
104A:A:K209 B:B:M188 13.03154.32YesYes288
105B:B:R283 B:B:V40 14.58446.54YesNo1893
106B:B:I43 B:B:V40 15.88273.07NoNo033
107B:B:I43 B:B:M45 16.39532.92NoNo034
108B:B:L308 B:B:M45 15.82124.24YesNo1074
109B:B:L126 B:B:Y105 11.23145.86NoYes856
110B:B:I81 B:B:L126 18.88682.85YesNo875
111B:B:I81 B:B:V90 21.93034.61YesNo875
112B:B:L69 B:B:V90 22.94742.98NoNo055
113B:B:D66 B:B:L69 23.45449.5NoNo085
114B:B:D66 B:B:R68 23.96134.76NoNo085
115B:B:S147 B:B:S160 17.31364.89NoYes096
116B:B:S147 B:B:Y145 17.64353.82NoYes098
117B:B:G162 B:B:S161 10.18943.71YesNo299
118B:B:D228 B:B:S227 14.01175.89YesYes296
119B:B:D247 B:B:S227 10.35735.89YesYes296
120R:R:S298 R:R:Y301 11.97785.09NoNo095
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8P13
Class A
SubFamily Sensory
Type Opsin
SubType Rhodopsin
Species Bos Taurus
Ligand -
Other Ligand(s) -
Protein Partners Gi1/Beta1/GammaT1
PDB Resolution 5.2
Date 2024-11-20
D.O.I. To be published
Net Summary
Imin 2.92
Number of Linked Nodes 948
Number of Links 1111
Number of Hubs 158
Number of Links mediated by Hubs 580
Number of Communities 38
Number of Nodes involved in Communities 271
Number of Links involved in Communities 375
Path Summary
Number Of Nodes in MetaPath 121
Number Of Links MetaPath 120
Number of Shortest Paths 2204994
Length Of Smallest Path 3
Average Path Length 46.544
Length of Longest Path 103
Minimum Path Strength 1.16
Average Path Strength 7.18592
Maximum Path Strength 28.66
Minimum Path Correlation 0.7
Average Path Correlation 0.992565
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 1.75439
Average % Of Corr. Nodes 39.7827
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.3758
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• WD40 repeat-like   • Ras-like P-loop GTPases   • Galpha insert domain-like   • G protein-coupled receptor-like
SCOP2Family Identifier• WD40 repeat-like   • Ras-like P-loop GTPases   • Galpha insert domain-like   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>8P13_Chain_R
GTEGPNFYV PFSNKTGVV RSPFEAPQY YLAEPWQFS MLAAYMFLL 
IMLGFPINF LTLYVTVQH KKLRTPLNY ILLNLAVAD LFMVFGGFT 
TTLYTSLHG YFVFGPTGC NLEGFFATL GGEIALWSL VVLAIERYV 
VVCKPMSNF RFGENHAIM GVAFTWVMA LACAAPPLV GWSRYIPEG 
MQCSCGIDY YTPHEETNN ESFVIYMFV VHFIIPLIV IFFCYGQLV 
FTVKEAAAQ QQESATTQK AEKEVTRMV IIVIAFLIC WLPYAGVAF 
YIFTHQGSF GPIFMTIPA FFAKTSAVY NPVIYIMMN KQFRNCMCY 
C


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainA
ProteinG Protein α Sub unit
UniProtP63096
Sequence
>8P13_Chain_A
TLSAEDKAA VERSKMIDR NLREDGEKA AREVKLLLL GAGESGKST 
IVKQMKIIH EAGYSEEEC KQYKAVVYS NTIQSIIAI IRAMGRLKI 
DFGDSARAD DARQLFVLA GAAEEGFMT AELAGVIKR LWKDSGVQA 
CFNRSREYQ LNDSAAYYL NDLDRIAQP NYIPTQQDV LRTRVKTTG 
IVETHFTFK DLHFKMFDV GGQRSERKK WIHCFEGVT AIIFCVALS 
DRMHESMKL FDSICNNKW FTDTSIILF LNKKDLFEE KIKKSPLTI 
CYNTYEEAA AYIQCQFED LNKRKDTKE IYTHFTCAT DTKNVQFVF 
DAVTDVIIK NNLKDCGLF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainB
ProteinG Protein β Sub unit
UniProtP62871
Sequence
>8P13_Chain_B
TLSQITNNI DPVGRIQMR TRRTLRGHL AKIYAMHWG TDSRLLVSA 
SQDGKLIIW DSYTTNKVH AIPLRSSWV MTCAYAPSG NYVACGGLD 
NICSIYNLK TREGNVRVS RELAGHTGY LSCCRFLDD NQIVTSSGD 
TTCALWDIE TGQQTTTFT GHTGDVMSL SLAPDTRLF VSGACDASA 
KLWDVREGM CRQTFTGHE SDINAICFF PNGNAFATG SDDATCRLF 
DLRADQELM TYSHDNIIC GITSVSFSK SGRLLLAGY DDFNCNVWD 
ALKADRAGV LAGHDNRVS CLGVTDDGM AVATGSWDS FLKIWN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainG
ProteinG Protein γ Sub unit
UniProtP02698
Sequence
>8P13_Chain_G
MLVSKCCEE FRDYVEERS GEDPLVKGI PEDKNPFKE


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8P13ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.22024-11-20To be published
8P13 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.22024-11-20To be published
8P15ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.92024-11-20To be published
8P15 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.92024-11-20To be published
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-04doi.org/10.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-04doi.org/10.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-04doi.org/10.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-04doi.org/10.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-04doi.org/10.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-04doi.org/10.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-04doi.org/10.1073/pnas.1718084115
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-04doi.org/10.1073/pnas.1718084115
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6PH7 (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Nerol2.92020-07-01To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PGS (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Geraniol2.92020-07-01To be published
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PEL (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Citronellol3.192020-06-24To be published
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.62006-09-02doi.org/10.1002/anie.200600595
4J4QASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-Gt(CT)2.652013-10-30doi.org/10.1002/anie.201302374
4J4Q (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-2.652013-10-30doi.org/10.1002/anie.201302374
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-19doi.org/10.1016/j.bpj.2010.08.003
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-09doi.org/10.1016/j.cell.2017.07.002
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-12doi.org/10.1016/j.jmb.2004.07.044
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-20doi.org/10.1016/j.jmb.2004.08.090
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-25doi.org/10.1016/j.jmb.2007.03.007
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82011-08-17doi.org/10.1016/j.jmb.2011.08.044
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-17doi.org/10.1016/j.jmb.2011.08.044
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OY9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
4X1HASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-Gt(CT)2.292015-11-04doi.org/10.1016/j.str.2015.09.015
4X1H (No Gprot) ASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-2.292015-11-04doi.org/10.1016/j.str.2015.09.015
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-04doi.org/10.1021/bi0155091
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-24doi.org/10.1038/embor.2013.44
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-08doi.org/10.1038/embor.2013.44
4BEY (No Gprot) ASensoryOpsinsRhodopsinBos taurus--2.92013-05-08doi.org/10.1038/embor.2013.44
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-13doi.org/10.1038/nature06925
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-24doi.org/10.1038/nature07063
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-23doi.org/10.1038/nature07330
3DQB (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.22008-09-23doi.org/10.1038/nature07330
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.852011-03-09doi.org/10.1038/nature09789
3PQR (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.852011-03-09doi.org/10.1038/nature09789
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--32011-03-09doi.org/10.1038/nature09789
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)32011-03-16doi.org/10.1038/nature09795
2X72 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-32011-03-16doi.org/10.1038/nature09795
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-29doi.org/10.1038/nature14656
4PXFASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Arrestin1 Finger Loop2.752014-09-17doi.org/10.1038/ncomms5801
5WKTASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)3.22017-12-13doi.org/10.1038/nprot.2017.135
5WKT (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-3.22017-12-13doi.org/10.1038/nprot.2017.135
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-30doi.org/10.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-30doi.org/10.1038/s41467-023-40911-9
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-30doi.org/10.1038/s41467-023-40911-9
9EPPASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPP (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.152024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQ (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.152024-10-23doi.org/10.1038/s41467-024-53208-2
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/β1/γ24.52018-06-20doi.org/10.1038/s41586-018-0215-y
6CMO (No Gprot) ASensoryOpsinsRhodopsinHomo sapiens--4.52018-06-20doi.org/10.1038/s41586-018-0215-y
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK15.82021-07-07doi.org/10.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK172021-07-07doi.org/10.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK14.12021-07-07doi.org/10.1038/s41586-021-03721-x
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK142021-07-07doi.org/10.1038/s41586-021-03721-x
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-23doi.org/10.1038/sdata.2016.21
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.82006-08-22doi.org/10.1073/pnas.0601765103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-17doi.org/10.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-17doi.org/10.1073/pnas.0608022103
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-17doi.org/10.1073/pnas.0608022103
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-15doi.org/10.1073/pnas.082666399
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)3.32012-01-25doi.org/10.1073/pnas.1114089108
4A4M (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32012-01-25doi.org/10.1073/pnas.1114089108
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside--2.72017-03-15doi.org/10.1073/pnas.1617446114
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-15doi.org/10.1073/pnas.1617446114
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-03doi.org/10.1073/pnas.1902192116
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-06doi.org/10.1074/jbc.C800040200
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-21doi.org/10.1074/jbc.RA119.010089
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-05doi.org/10.1107/S0907444908017162
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-05doi.org/10.1107/S0907444908017162
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Go3.122018-10-03doi.org/10.1126/sciadv.aat7052
6FUF (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.122018-10-03doi.org/10.1126/sciadv.aat7052
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-04doi.org/10.1126/science.289.5480.739
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82015-06-17doi.org/10.1371/journal.pone.0126970
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.32016-08-10doi.org/10.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.812016-08-10doi.org/10.15252/embr.201642671
5EN0 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.812016-08-10doi.org/10.15252/embr.201642671
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-30doi.org/10.1529/biophysj.107.108225
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gi1/β1/γ14.382019-07-10doi.org/10.7554/eLife.46041
6QNO (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.382019-07-10doi.org/10.7554/eLife.46041
9EPRASensoryOpsinsRhodopsinHasarius adansoniRetinal-Gi1/β1/γ24.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPR (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoniRetinal-4.92024-10-30doi.org/10.1038/s41467-024-53208-2
6NWEASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6NWE (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-2.712020-02-12To be published
8P12ASensoryOpsinsRhodopsinBos taurus--Gi1/β1/γT13.212024-11-20To be published
8P12 (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.212024-11-20To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

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