Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:N15 12.52427
2R:R:V20 7.85833626
3R:R:S22 5.415425
4R:R:P23 8.7425425
5R:R:F24 6.19833625
6R:R:Q28 7.4425
7R:R:Y29 6.37464
8R:R:Y30 7.80167624
9R:R:F37 6.775465
10R:R:Y43 7.3275434
11R:R:L68 7.4925407
12R:R:I75 5.6447
13R:R:N78 6.425649
14R:R:D83 7.0875489
15R:R:F91 5.958507
16R:R:F103 6.145628
17R:R:C110 5.2075429
18R:R:E113 6.815405
19R:R:E122 6.3875416
20R:R:I123 4.115407
21R:R:W126 9.394505
22R:R:Y136 6.958597
23R:R:F148 5.87333607
24R:R:P170 4.0225417
25R:R:W175 9.29515
26R:R:R177 12.9825415
27R:R:Y178 7.082503
28R:R:P180 5.76523
29R:R:Q184 6.81423
30R:R:D190 9.66514
31R:R:Y191 8.6375416
32R:R:Y192 6.562515
33R:R:T193 6.084515
34R:R:H195 12.945414
35R:R:N200 6.3025414
36R:R:F203 9.22429716
37R:R:Y206 8.5475414
38R:R:M207 5.9925415
39R:R:H211 7.54286716
40R:R:F212 4.655618
41R:R:Y223 7.31509
42R:R:E247 5.265107
43R:R:W265 9.8475408
44R:R:Y268 9.964516
45R:R:F283 8.925404
46R:R:P285 4.7025403
47R:R:Y301 5.0075435
48R:R:N302 4.7625439
49R:R:Y306 8.512539
50R:R:F313 9.47408
51L:L:?1 8.358181110
52H:H:?1 16.064520
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:Y191 R:R:Y192 17.61288.94YesYes165
2L:L:?1 R:R:Y191 18.667112.67YesYes106
3L:L:?1 R:R:K296 38.46643.81YesNo007
4R:R:F91 R:R:K296 38.2977.44YesNo077
5R:R:F91 R:R:M44 72.68563.73YesNo077
6R:R:M44 R:R:T94 72.44796.02NoNo077
7R:R:S186 R:R:T94 65.26197.99NoNo057
8R:R:E113 R:R:S186 64.69654.31YesNo055
9R:R:E113 R:R:F103 63.20668.16YesYes058
10R:R:F103 R:R:F24 23.86624.29YesYes285
11R:R:F24 R:R:P180 18.99217.22YesYes253
12R:R:P180 R:R:Q184 53.6216.32YesYes233
13R:R:Q184 R:R:Q28 44.78935.12YesYes235
14R:R:Q28 R:R:V11 17.01064.3YesNo258
15R:R:V11 R:R:V20 15.47294.81NoYes286
16R:R:C110 R:R:F103 19.28584.19YesYes298
17R:R:C110 R:R:P180 18.8313.77YesYes293
18R:R:C187 R:R:F103 19.29538.38NoYes298
19R:R:C187 R:R:P180 18.84475.65NoYes293
20R:R:Q28 R:R:Y30 24.733413.53YesYes254
21R:R:V20 R:R:Y30 15.608111.36YesYes264
22H:H:?1 R:R:V20 18.66444.01YesYes206
23H:H:?1 H:H:?2 12.464339.01YesNo000
24R:R:L40 R:R:T94 10.43774.42NoNo057
25R:R:F91 R:R:L47 40.237610.96YesNo077
26L:L:?1 R:R:W265 53.356110.26YesYes008
27R:R:C264 R:R:W265 63.278910.45NoYes088
28R:R:C264 R:R:Y301 32.04374.03NoYes385
29R:R:T297 R:R:Y301 39.25984.99NoYes365
30R:R:L47 R:R:T297 37.63615.9NoNo376
31R:R:C264 R:R:S298 31.46335.16NoNo389
32R:R:N302 R:R:S298 31.46744.47YesNo399
33R:R:N302 R:R:Y306 1005.81YesYes399
34R:R:N302 R:R:Y301 69.64974.65YesYes395
35R:R:M257 R:R:Y306 92.032810.78NoYes089
36R:R:M257 R:R:Y223 91.526111.97NoYes089
37R:R:R135 R:R:Y223 73.34119.26NoYes099
38R:R:L131 R:R:R135 72.741518.22NoNo099
39R:R:I75 R:R:L131 72.13934.28YesNo079
40R:R:I75 R:R:V130 64.06157.68YesNo077
41R:R:E134 R:R:V130 62.13185.7NoNo087
42R:R:E134 R:R:F148 61.483113.99NoYes087
43R:R:F148 R:R:P71 46.54152.89YesNo076
44R:R:P71 R:R:T70 45.833.5NoNo067
45R:R:N73 R:R:T70 45.11575.85NoNo087
46R:R:N73 R:R:Q312 19.83485.28NoNo086
47R:R:L68 R:R:Q312 18.33666.65YesNo076
48R:R:C316 R:R:L68 28.92457.94NoYes057
49R:R:C316 R:R:H65 27.337717.69NoNo055
50R:R:H65 R:R:T320 22.55795.48NoNo055
51R:R:T320 R:R:V61 16.1536.35NoNo057
52R:R:M317 R:R:V61 14.54424.56NoNo067
53R:R:L57 R:R:M317 12.931411.31NoNo066
54R:R:F313 R:R:N73 24.60368.46YesNo088
55R:R:F313 R:R:L68 18.525110.96YesYes087
56R:R:L321 R:R:L57 11.31585.54NoNo066
57L:L:?1 R:R:T118 11.13013.98YesNo004
58L:L:?1 R:R:E122 12.29364.78YesYes106
59R:R:L125 R:R:W265 13.801313.67NoYes078
60L:L:?1 R:R:M207 19.77067.64YesYes105
61R:R:E122 R:R:H211 11.67226.15YesYes166
62R:R:L125 R:R:W126 11.00725.69NoYes075
63R:R:F146 R:R:H152 10.22610.18NoNo055
64R:R:F148 R:R:H152 11.89765.66YesNo075
65L:L:?1 R:R:I189 10.90617.71YesNo004
66R:R:H211 R:R:V210 11.743311.07YesNo164
67R:R:V254 R:R:Y223 24.03146.31NoYes089
68R:R:V227 R:R:V254 13.29744.81NoNo058
69R:R:K231 R:R:V227 12.48623.04NoNo055
70R:R:A234 R:R:E247 13.43673.02NoYes057
71R:R:P291 R:R:Y268 10.187811.13NoYes066
72R:R:F203 R:R:I189 10.16876.28YesNo064
73R:R:F203 R:R:M207 10.54976.22YesYes165
74L:L:?1 R:R:Y268 12.173426.4YesYes106
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:F91 R:R:K296 7.44 0 Yes No 7 7 2 1
R:R:T118 R:R:Y178 8.74 0 No Yes 4 3 1 2
L:L:?1 R:R:T118 3.98 1 Yes No 0 4 0 1
L:L:?1 R:R:G121 4.62 1 Yes No 0 7 0 1
R:R:E122 R:R:L125 3.98 1 Yes No 6 7 1 2
R:R:C167 R:R:E122 10.64 1 No Yes 5 6 2 1
R:R:E122 R:R:H211 6.15 1 Yes Yes 6 6 1 2
L:L:?1 R:R:E122 4.78 1 Yes Yes 0 6 0 1
R:R:L125 R:R:W265 13.67 0 No Yes 7 8 2 1
R:R:C167 R:R:M207 4.86 1 No Yes 5 5 2 1
R:R:C167 R:R:H211 7.37 1 No Yes 5 6 2 2
R:R:F203 R:R:I189 6.28 1 Yes No 6 4 2 1
L:L:?1 R:R:I189 7.71 1 Yes No 0 4 0 1
R:R:Y191 R:R:Y192 8.94 1 Yes Yes 6 5 1 2
R:R:Y191 R:R:Y268 6.95 1 Yes Yes 6 6 1 1
R:R:M288 R:R:Y191 5.99 1 No Yes 4 6 2 1
L:L:?1 R:R:Y191 12.67 1 Yes Yes 0 6 0 1
R:R:M288 R:R:Y192 7.18 1 No Yes 4 5 2 2
R:R:F203 R:R:M207 6.22 1 Yes Yes 6 5 2 1
R:R:H211 R:R:M207 5.25 1 Yes Yes 6 5 2 1
L:L:?1 R:R:M207 7.64 1 Yes Yes 0 5 0 1
R:R:F208 R:R:F212 5.36 1 No Yes 5 8 2 1
R:R:F208 R:R:I213 7.54 1 No No 5 4 2 2
R:R:F212 R:R:I213 3.77 1 Yes No 8 4 1 2
R:R:A269 R:R:F212 8.32 0 No Yes 7 8 2 1
L:L:?1 R:R:F212 4.39 1 Yes Yes 0 8 0 1
R:R:F261 R:R:W265 5.01 0 No Yes 9 8 2 1
R:R:C264 R:R:W265 10.45 3 No Yes 8 8 2 1
L:L:?1 R:R:W265 10.26 1 Yes Yes 0 8 0 1
R:R:P291 R:R:Y268 11.13 0 No Yes 6 6 2 1
L:L:?1 R:R:Y268 26.4 1 Yes Yes 0 6 0 1
L:L:?1 R:R:A272 5.68 1 Yes No 0 5 0 1
L:L:?1 R:R:K296 3.81 1 Yes No 0 7 0 1
R:R:F212 R:R:L216 3.65 1 Yes No 8 7 1 2
R:R:F261 R:R:L216 3.65 0 No No 9 7 2 2
R:R:A168 R:R:T118 3.36 0 No No 7 4 2 1
R:R:A292 R:R:Y268 2.67 0 No Yes 5 6 2 1
R:R:A295 R:R:Y268 2.67 0 No Yes 8 6 2 1
R:R:F212 R:R:L266 2.44 1 Yes No 8 6 1 2
R:R:G120 R:R:G121 2.11 0 No No 8 7 2 1
R:R:A272 R:R:V204 1.7 0 No No 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 4X1H_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.73
Number of Linked Nodes 322
Number of Links 377
Number of Hubs 52
Number of Links mediated by Hubs 200
Number of Communities 10
Number of Nodes involved in Communities 79
Number of Links involved in Communities 115
Path Summary
Number Of Nodes in MetaPath 75
Number Of Links MetaPath 74
Number of Shortest Paths 131332
Length Of Smallest Path 3
Average Path Length 18.6608
Length of Longest Path 44
Minimum Path Strength 1.57
Average Path Strength 7.31482
Maximum Path Strength 37.04
Minimum Path Correlation 0.7
Average Path Correlation 0.945679
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.5
Average % Of Corr. Nodes 48.9269
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.6271
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like
SCOP2Family Identifier• G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeBNG
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeBNG
NameB-nonylglucoside
SynonymsBeta-NONYLGLUCOSIDE; nonyl beta-D-glucoside; nonyl D-glucoside; nonyl glucoside
Identifier
FormulaC15 H30 O6
Molecular Weight306.395
SMILES
PubChem155448
Formal Charge0
Total Atoms51
Total Chiral Atoms5
Total Bonds51
Total Aromatic Bonds0

CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?4 H:H:?5
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylglucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeBMA
PDB ResiduesH:H:?3
Environment DetailsOpen EMBL-EBI Page
CodeBMA
Namebeta-D-mannopyranose
Synonymsbeta-D-mannose; D-mannose; mannose
Identifier
FormulaC6 H12 O6
Molecular Weight180.156
SMILES
PubChem439680
Formal Charge0
Total Atoms24
Total Chiral Atoms5
Total Bonds24
Total Aromatic Bonds0

CodePLM
PDB ResiduesH:H:?6 H:H:?7
Environment DetailsOpen EMBL-EBI Page
CodePLM
NamePalmitic Acid
SynonymsPalmitinsäure
Identifier
FormulaC16 H32 O2
Molecular Weight256.424
SMILES
PubChem985
Formal Charge0
Total Atoms50
Total Chiral Atoms0
Total Bonds49
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP02699
Sequence
>4X1H_nogp_Chain_R
MNGTEGPNF YVPFSNKTG VVRSPFEAP QYYLAEPWQ FSMLAAYMF 
LLIMLGFPI NFLTLYVTV QHKKLRTPL NYILLNLAV ADLFMVFGG 
FTTTLYTSL HGYFVFGPT GCNLEGFFA TLGGEIALW SLVVLAIER 
YVVVCKPMS NFRFGENHA IMGVAFTWV MALACAAPP LVGWSRYIP 
EGMQCSCGI DYYTPHEET NNESFVIYM FVVHFIIPL IVIFFCYGQ 
LVFTVKEAA AQQQESATT QKAEKEVTR MVIIMVIAF LICWLPYAG 
VAFYIFTHQ GSDFGPIFM TIPAFFAKT SAVYNPVIY IMMNKQFRN 
CMVTTLCCG KN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8P13ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.22024-11-20To be published
8P13 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.22024-11-20To be published
8P15ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.92024-11-20To be published
8P15 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.92024-11-20To be published
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-04doi.org/10.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-04doi.org/10.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-04doi.org/10.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-04doi.org/10.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-04doi.org/10.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-04doi.org/10.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-04doi.org/10.1073/pnas.1718084115
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-04doi.org/10.1073/pnas.1718084115
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6PH7 (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Nerol2.92020-07-01To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PGS (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Geraniol2.92020-07-01To be published
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PEL (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Citronellol3.192020-06-24To be published
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.62006-09-02doi.org/10.1002/anie.200600595
4J4QASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-Gt(CT)2.652013-10-30doi.org/10.1002/anie.201302374
4J4Q (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-2.652013-10-30doi.org/10.1002/anie.201302374
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-19doi.org/10.1016/j.bpj.2010.08.003
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-09doi.org/10.1016/j.cell.2017.07.002
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-12doi.org/10.1016/j.jmb.2004.07.044
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-20doi.org/10.1016/j.jmb.2004.08.090
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-25doi.org/10.1016/j.jmb.2007.03.007
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82011-08-17doi.org/10.1016/j.jmb.2011.08.044
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-17doi.org/10.1016/j.jmb.2011.08.044
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OY9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.92019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
6OYA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32019-07-24doi.org/10.1016/j.molcel.2019.06.007
4X1HASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-Gt(CT)2.292015-11-04doi.org/10.1016/j.str.2015.09.015
4X1H (No Gprot) ASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-2.292015-11-04doi.org/10.1016/j.str.2015.09.015
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-04doi.org/10.1021/bi0155091
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-24doi.org/10.1038/embor.2013.44
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-08doi.org/10.1038/embor.2013.44
4BEY (No Gprot) ASensoryOpsinsRhodopsinBos taurus--2.92013-05-08doi.org/10.1038/embor.2013.44
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-13doi.org/10.1038/nature06925
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-24doi.org/10.1038/nature07063
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-23doi.org/10.1038/nature07330
3DQB (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.22008-09-23doi.org/10.1038/nature07330
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.852011-03-09doi.org/10.1038/nature09789
3PQR (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.852011-03-09doi.org/10.1038/nature09789
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--32011-03-09doi.org/10.1038/nature09789
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)32011-03-16doi.org/10.1038/nature09795
2X72 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-32011-03-16doi.org/10.1038/nature09795
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-29doi.org/10.1038/nature14656
4PXFASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Arrestin1 Finger Loop2.752014-09-17doi.org/10.1038/ncomms5801
5WKTASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)3.22017-12-13doi.org/10.1038/nprot.2017.135
5WKT (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-3.22017-12-13doi.org/10.1038/nprot.2017.135
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-30doi.org/10.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-30doi.org/10.1038/s41467-023-40911-9
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-30doi.org/10.1038/s41467-023-40911-9
9EPPASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPP (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.062024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.152024-10-23doi.org/10.1038/s41467-024-53208-2
9EPQ (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.152024-10-23doi.org/10.1038/s41467-024-53208-2
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/β1/γ24.52018-06-20doi.org/10.1038/s41586-018-0215-y
6CMO (No Gprot) ASensoryOpsinsRhodopsinHomo sapiens--4.52018-06-20doi.org/10.1038/s41586-018-0215-y
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK15.82021-07-07doi.org/10.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK172021-07-07doi.org/10.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK14.12021-07-07doi.org/10.1038/s41586-021-03721-x
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK142021-07-07doi.org/10.1038/s41586-021-03721-x
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-29doi.org/10.1038/s41586-023-05863-6
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-23doi.org/10.1038/sdata.2016.21
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.82006-08-22doi.org/10.1073/pnas.0601765103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-17doi.org/10.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-17doi.org/10.1073/pnas.0608022103
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-17doi.org/10.1073/pnas.0608022103
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-15doi.org/10.1073/pnas.082666399
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)3.32012-01-25doi.org/10.1073/pnas.1114089108
4A4M (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32012-01-25doi.org/10.1073/pnas.1114089108
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside--2.72017-03-15doi.org/10.1073/pnas.1617446114
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-15doi.org/10.1073/pnas.1617446114
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-03doi.org/10.1073/pnas.1902192116
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-06doi.org/10.1074/jbc.C800040200
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-21doi.org/10.1074/jbc.RA119.010089
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-05doi.org/10.1107/S0907444908017162
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-05doi.org/10.1107/S0907444908017162
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Go3.122018-10-03doi.org/10.1126/sciadv.aat7052
6FUF (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.122018-10-03doi.org/10.1126/sciadv.aat7052
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-04doi.org/10.1126/science.289.5480.739
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82015-06-17doi.org/10.1371/journal.pone.0126970
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.32016-08-10doi.org/10.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.812016-08-10doi.org/10.15252/embr.201642671
5EN0 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.812016-08-10doi.org/10.15252/embr.201642671
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-30doi.org/10.1529/biophysj.107.108225
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gi1/β1/γ14.382019-07-10doi.org/10.7554/eLife.46041
6QNO (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.382019-07-10doi.org/10.7554/eLife.46041
9EPRASensoryOpsinsRhodopsinHasarius adansoniRetinal-Gi1/β1/γ24.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPR (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoniRetinal-4.92024-10-30doi.org/10.1038/s41467-024-53208-2
6NWEASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6NWE (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-2.712020-02-12To be published
8P12ASensoryOpsinsRhodopsinBos taurus--Gi1/β1/γT13.212024-11-20To be published
8P12 (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.212024-11-20To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 4X1H_nogp.zip



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