Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F9 7.116517
2R:R:Y10 6.8175415
3R:R:V11 4.015615
4R:R:P12 3.4675416
5R:R:V20 8.77415
6R:R:S22 4.97417
7R:R:P23 9.332515
8R:R:F24 6.51667615
9R:R:Y30 6.27614
10R:R:L31 3.97514
11R:R:M44 5.3554147
12R:R:L68 7.28408
13R:R:T70 6.3375457
14R:R:I75 7.3125427
15R:R:N78 7.09529
16R:R:F91 5.9585147
17R:R:F103 6.43429718
18R:R:Q113 6.4175415
19R:R:F115 5.18754166
20R:R:I123 5.325627
21R:R:W126 6.765626
22R:R:S127 5.015427
23R:R:V129 5.3325427
24R:R:V130 5.4425427
25R:R:E134 7.725428
26R:R:R135 7.995409
27R:R:V138 3.06408
28R:R:F146 3.9225434
29R:R:F148 5.99526
30R:R:T160 4.128526
31R:R:W175 9.518504
32R:R:R177 8.9275414
33R:R:Y178 7.8985165
34R:R:I179 7.735413
35R:R:P180 5.03511
36R:R:E181 4.91403
37R:R:Q184 5.734513
38R:R:C187 6.4725419
39R:R:D190 9.552514
40R:R:Y191 4.79405
41R:R:Y192 7.20857714
42R:R:T193 8.18413
43R:R:K195 7.15414
44R:R:F203 9.758506
45R:R:H211 7.45526
46R:R:P215 4.628528
47R:R:E247 5.24487
48R:R:Y257 7.565408
49R:R:Y268 5.995406
50R:R:P285 4.455414
51R:R:P291 6.025407
52R:R:K296 4.50754147
53R:R:Y301 4.6554185
54R:R:Q312 6.212507
55R:R:F313 7.344558
56V:V:I13 3.7425497
57V:V:I25 4.465405
58V:V:Y26 8.6325108
59V:V:R30 5.645409
60V:V:Y32 7.26507
61V:V:V53 3.7425404
62V:V:V60 7.2654117
63V:V:F66 5.91429739
64V:V:Y68 6.7325439
65V:V:M76 10.578557
66V:V:L84 4.594538
67V:V:Y85 8.2025444
68V:V:L104 4.9975495
69V:V:Q105 6.0754219
70V:V:F119 7.055119
71V:V:L121 4.47754117
72V:V:F123 6.4525445
73V:V:Y126 8.4475445
74V:V:Q138 5.5354124
75V:V:D139 10.15254128
76V:V:F153 4.64506
77V:V:I157 5.315403
78V:V:R176 7.81409
79V:V:K177 8.468549
80V:V:P189 4.875409
81V:V:W195 8.2075407
82V:V:K212 6.554238
83V:V:E213 7.62254227
84V:V:I214 4.21754225
85V:V:Y215 7.6156236
86V:V:H217 10.73254259
87V:V:E219 5.2754237
88V:V:P222 3.16404
89V:V:V223 4.9854247
90V:V:K233 7.33568
91V:V:V240 4.61254244
92V:V:V242 4407
93V:V:E243 8.022575
94V:V:L250 8.1875438
95V:V:Y256 6.925407
96V:V:L281 5.054245
97V:V:I294 4.695407
98V:V:I300 5.2275407
99V:V:I324 4.385638
100V:V:Y328 7.36509
101V:V:K331 7.12833677
102V:V:T335 4.8125404
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:I179 R:R:P180 42.37345.08YesYes131
2R:R:P180 R:R:Q184 14.56156.32YesYes113
3R:R:F24 R:R:P180 16.87244.33YesYes151
4R:R:F103 R:R:F105 10.09028.57YesNo086
5R:R:E181 R:R:Y192 22.22183.37YesYes034
6R:R:E181 R:R:S186 12.54265.75YesNo034
7R:R:E181 R:R:Y268 10.96635.61YesYes036
8R:R:P291 R:R:Y268 18.72389.74YesYes076
9R:R:P267 R:R:P291 10.39423.9NoYes097
10R:R:F294 R:R:P267 11.80027.22NoNo079
11R:R:Y191 R:R:Y192 11.49697.94YesYes054
12R:R:D190 R:R:Y192 33.46689.2YesYes144
13R:R:D190 R:R:N200 76.13436.73YesNo045
14R:R:N200 R:R:S176 78.18984.47NoNo055
15R:R:F203 R:R:S176 78.51713.21YesNo065
16R:R:F203 R:R:M207 86.15074.98YesNo065
17R:R:H211 R:R:M207 85.81577.88YesNo265
18R:R:H211 R:R:W126 86.78125.29YesYes266
19R:R:T160 R:R:W126 97.9533.64YesYes266
20R:R:S127 R:R:T160 10.03816.4YesYes276
21R:R:I75 R:R:S127 11.80236.19YesYes277
22R:R:I75 R:R:L131 32.09884.28YesNo079
23R:R:L131 R:R:L76 22.09165.54NoNo098
24R:R:I307 R:R:L76 21.4074.28NoNo068
25R:R:I307 R:R:T58 18.59434.56NoNo069
26R:R:M317 R:R:T58 10.52094.52NoNo069
27R:R:T160 R:R:V130 90.02593.17YesYes267
28R:R:I219 R:R:V129 12.22524.61NoYes087
29R:R:A132 R:R:I219 12.36814.87NoNo098
30R:R:A132 R:R:Y223 13.13446.67NoNo099
31R:R:L131 R:R:R135 11.174618.22NoYes099
32R:R:E134 R:R:V130 80.57255.7YesYes287
33R:R:E134 R:R:L72 91.21163.98YesNo288
34R:R:L72 R:R:V138 99.91772.98NoYes088
35R:R:P215 R:R:W126 19.7736.76YesYes286
36R:R:L125 R:R:W265 17.945511.39NoNo078
37R:R:A132 R:R:C222 10.67993.61NoNo097
38R:R:C222 R:R:Y136 10.78122.69NoNo078
39R:R:N145 R:R:V138 99.96624.43NoYes058
40R:R:C140 R:R:Y136 11.04162.69NoNo078
41R:R:C140 R:R:T229 11.10285.07NoNo075
42R:R:T229 V:V:Y251 11.17674.99NoNo057
43R:R:N145 V:V:Y68 10010.47NoYes059
44V:V:F66 V:V:Y68 92.70063.09YesYes399
45V:V:F66 V:V:I324 75.52925.02YesYes398
46V:V:L250 V:V:Y251 11.39775.86YesNo087
47V:V:F66 V:V:L250 13.760712.18YesYes398
48V:V:I324 V:V:L133 89.07665.71YesNo387
49R:R:F146 V:V:L133 88.12593.65YesNo347
50R:R:P291 R:R:V271 21.66387.07YesNo075
51R:R:I275 R:R:V271 11.47723.07NoNo055
52R:R:V254 R:R:Y223 10.12053.79NoNo089
53V:V:F66 V:V:L84 60.14658.53YesYes398
54V:V:C64 V:V:L84 77.35454.76NoYes098
55V:V:C64 V:V:F148 76.8959.78NoNo097
56V:V:F148 V:V:K177 16.85138.69NoYes479
57V:V:K177 V:V:L127 124.23YesNo497
58R:R:F294 R:R:I263 15.22573.77NoNo076
59R:R:I263 R:R:Y301 16.00473.63NoYes065
60R:R:A298 R:R:Y301 16.33765.34NoYes1895
61R:R:A298 R:R:C264 17.04763.61NoNo099
62R:R:F283 R:R:Y274 12.76783.09NoNo023
63R:R:H278 R:R:Y274 10.216915.24NoNo033
64V:V:D74 V:V:Y68 19.03629.2NoYes099
65V:V:D74 V:V:F80 18.531711.94NoNo099
66V:V:F123 V:V:F148 59.5854.29YesNo457
67V:V:F123 V:V:L62 60.34927.31YesNo056
68V:V:L121 V:V:L62 60.66098.3YesNo076
69V:V:F119 V:V:L121 44.14673.65YesYes1197
70V:V:F119 V:V:L27 28.65433.65YesNo098
71V:V:L27 V:V:Y32 26.16463.52NoYes087
72V:V:D43 V:V:Y32 14.36584.6NoYes077
73V:V:D43 V:V:L104 13.72768.14NoYes075
74V:V:L104 V:V:L108 10.48154.15YesNo959
75V:V:F119 V:V:I25 18.80263.77YesYes095
76V:V:I25 V:V:V171 15.16594.61YesNo057
77V:V:F80 V:V:R81 16.103917.1NoNo098
78V:V:R67 V:V:R81 14.72757.46NoNo088
79V:V:E149 V:V:R67 13.94363.49NoNo078
80V:V:E149 V:V:K151 12.62286.75NoNo2078
81V:V:F153 V:V:K151 12.32443.72YesNo068
82V:V:L121 V:V:V60 15.52132.98YesYes1177
83V:V:V60 V:V:V91 15.76973.21YesNo075
84V:V:V91 V:V:Y117 14.78173.79NoNo053
85V:V:L52 V:V:S22 10.8469.01NoNo045
86V:V:K29 V:V:Y32 10.51528.36NoYes087
87R:R:F146 V:V:P135 84.41682.89YesNo048
88V:V:P135 V:V:Q134 83.98473.16NoNo088
89V:V:I294 V:V:Q134 80.03285.49YesNo078
90V:V:I294 V:V:Q244 65.05834.12YesNo078
91V:V:Q244 V:V:Y328 64.074513.53NoYes089
92V:V:F354 V:V:Y328 45.64276.19NoYes059
93V:V:F354 V:V:Y215 15.8338.25NoYes056
94V:V:F354 V:V:I330 29.35516.28NoNo057
95V:V:I330 V:V:V223 23.50687.68NoYes077
96V:V:V223 V:V:V240 22.54694.81YesYes2474
97V:V:L279 V:V:V240 21.02982.98NoYes044
98V:V:L279 V:V:T265 20.43454.42NoNo045
99V:V:E267 V:V:T265 13.18087.06NoNo065
100V:V:E267 V:V:L275 11.95223.98NoNo065
101V:V:L275 V:V:V269 11.33572.98NoNo056
102V:V:I294 V:V:R291 18.2846.26YesNo077
103V:V:P259 V:V:R291 15.83232.88NoNo037
104V:V:E243 V:V:P259 15.21591.57YesNo053
105V:V:E243 V:V:K331 12.072516.2YesYes757
106V:V:K331 V:V:K333 10.22252.87YesNo077
107R:R:D190 R:R:I179 38.96979.8YesYes143
108R:R:C264 R:R:W265 17.405811.75NoNo098
109R:R:L125 R:R:P215 17.71266.57NoYes078
110R:R:E134 R:R:I75 14.08379.56YesYes287
111V:V:L84 V:V:V146 18.02082.98YesNo389
112V:V:I324 V:V:V146 18.03634.61YesNo389
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 5DGY
Class A
SubFamily Sensory
Type Opsins
SubType Rhodopsin
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners Arrestin1
PDB Resolution 7.7
Date 2016-03-23
D.O.I. 10.1038/sdata.2016.21
Net Summary
Imin 2.98
Number of Linked Nodes 644
Number of Links 756
Number of Hubs 102
Number of Links mediated by Hubs 367
Number of Communities 25
Number of Nodes involved in Communities 153
Number of Links involved in Communities 209
Path Summary
Number Of Nodes in MetaPath 113
Number Of Links MetaPath 112
Number of Shortest Paths 341711
Length Of Smallest Path 3
Average Path Length 22.1425
Length of Longest Path 50
Minimum Path Strength 1.32
Average Path Strength 5.96094
Maximum Path Strength 17.13
Minimum Path Correlation 0.7
Average Path Correlation 0.967126
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 53.9667
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.3479
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• hydrolase activity, acting on glycosyl bonds   • peptidoglycan muralytic activity   • hydrolase activity, hydrolyzing O-glycosyl compounds   • lysozyme activity   • hydrolase activity   • catalytic activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • G protein-coupled photoreceptor activity   • photoreceptor activity   • vitamin binding   • binding   • retinal binding   • isoprenoid binding   • retinoid binding   • lipid binding   • 11-cis retinal binding   • small molecule binding   • cation binding   • ion binding   • metal ion binding   • cytoskeletal protein binding   • spectrin binding   • protein-containing complex binding   • protein binding   • opsin binding   • phosphoprotein binding   • biological process involved in interspecies interaction between organisms   • response to stimulus   • response to other organism   • defense response   • response to external stimulus   • response to biotic stimulus   • defense response to bacterium   • defense response to other organism   • response to stress   • response to bacterium   • response to external biotic stimulus   • carbohydrate derivative catabolic process   • catabolic process   • peptidoglycan catabolic process
Gene OntologyBiological Process• biological process involved in interspecies interaction between organisms   • response to stimulus   • response to other organism   • defense response   • response to external stimulus   • response to biotic stimulus   • defense response to bacterium   • defense response to other organism   • response to stress   • response to bacterium   • response to external biotic stimulus   • carbohydrate derivative catabolic process   • catabolic process   • peptidoglycan catabolic process   • glycosaminoglycan metabolic process   • carbohydrate derivative metabolic process   • aminoglycan catabolic process   • macromolecule catabolic process   • glycosaminoglycan catabolic process   • aminoglycan metabolic process   • peptidoglycan metabolic process   • metabolic process   • cellular process   • macromolecule metabolic process   • symbiont-mediated cytolysis of host cell   • viral life cycle   • disruption of cell in another organism   • cytolysis   • biological process involved in interaction with host   • biological process involved in symbiotic interaction   • viral release from host cell by cytolysis   • exit from host cell   • viral process   • cytolysis in another organism   • viral release from host cell   • disruption of anatomical structure in another organism   • symbiont-mediated killing of host cell   • killing of cells of another organism   • cell killing   • cell wall organization or biogenesis   • cell wall macromolecule catabolic process   • cell wall macromolecule metabolic process   • multicellular organismal process   • rod bipolar cell differentiation   • cellular developmental process   • sensory organ development   • retina development in camera-type eye   • visual system development   • neural retina development   • neurogenesis   • multicellular organism development   • eye morphogenesis   • neuron differentiation   • cell differentiation   • anatomical structure development   • animal organ morphogenesis   • sensory system development   • system development   • developmental process   • camera-type eye morphogenesis   • eye development   • animal organ development   • nervous system development   • retinal bipolar neuron differentiation   • glutamatergic neuron differentiation   • generation of neurons   • retina morphogenesis in camera-type eye   • anatomical structure morphogenesis   • sensory organ morphogenesis   • camera-type eye development   • cellular response to stimulus   • response to light stimulus   • cellular response to light stimulus   • response to radiation   • response to abiotic stimulus   • cellular response to radiation   • cellular response to abiotic stimulus   • cellular response to environmental stimulus   • regulation of cellular process   • signaling   • detection of abiotic stimulus   • cell communication   • signal transduction   • detection of light stimulus   • phototransduction   • detection of external stimulus   • regulation of biological process   • biological regulation   • detection of visible light   • detection of stimulus   • G protein-coupled receptor signaling pathway   • G protein-coupled opsin signaling pathway   • phototransduction, visible light   • response to light intensity   • podosome assembly   • organelle assembly   • protein-containing complex organization   • membraneless organelle assembly   • cellular component organization   • cellular component biogenesis   • organelle organization   • cellular component assembly   • protein-containing complex assembly   • cellular component organization or biogenesis   • biosynthetic process   • gene expression   • macromolecule biosynthetic process   • multicellular organismal-level homeostasis   • homeostatic process   • anatomical structure homeostasis   • tissue homeostasis   • retina homeostasis   • photoreceptor cell maintenance   • absorption of visible light   • light absorption   • microtubule cytoskeleton organization   • microtubule-based process   • cytoskeleton organization   • sensory perception of light stimulus   • system process   • sensory perception   • nervous system process   • visual perception   • thermoception   • sensory perception of temperature stimulus   • detection of temperature stimulus involved in sensory perception   • response to temperature stimulus   • detection of temperature stimulus involved in thermoception   • detection of temperature stimulus   • detection of stimulus involved in sensory perception   • taxis   • thermotaxis   • locomotion   • host cellular component   • host intracellular part   • cellular anatomical structure   • host cell cytoplasm   • host cell part   • host intracellular region   • membrane   • cell-cell junction   • anchoring junction   • cell junction   • membrane-bounded organelle   • intracellular anatomical structure   • intracellular vesicle   • intracellular membrane-bounded organelle
Gene OntologyCellular Component• host cellular component   • host intracellular part   • cellular anatomical structure   • host cell cytoplasm   • host cell part   • host intracellular region   • membrane   • cell-cell junction   • anchoring junction   • cell junction   • membrane-bounded organelle   • intracellular anatomical structure   • intracellular vesicle   • intracellular membrane-bounded organelle   • intracellular organelle   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • Golgi-associated vesicle membrane   • organelle   • cytoplasm   • Golgi-associated vesicle   • vesicle   • organelle membrane   • photoreceptor inner segment   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • cell periphery   • plasma membrane   • sperm midpiece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • photoreceptor inner segment membrane   • plasma membrane region   • ciliary membrane   • cell projection membrane   • photoreceptor outer segment membrane   • Golgi apparatus   • endomembrane system   • Golgi membrane   • sperm head   • sperm head plasma membrane   • sperm plasma membrane   • rod photoreceptor outer segment
SCOP2Domain Identifier• G protein-coupled receptor-like
SCOP2Family Identifier• G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP08100
Sequence
>5DGY_Chain_R
MCGTEGPNF YVPFSNATG VVRSPFEYP QYYLAEPWQ FSMLAAYMF 
LLIVLGFPI NFLTLYVTV QHKKLRTPL NYILLNLAV ADLFMVLGG 
FTSTLYTSL HGYFVFGPT GCNLQGFFA TLGGEIALW SLVVLAIER 
YVVVCKPMS NFRFGENHA IMGVAFTWV MALACAAPP LAGWSRYIP 
EGLQCSCGI DYYTLKPEV NNESFVIYM FVVHFTIPM IIIFFCYGQ 
LVFTVKEAA AQQQESATT QKAEKEVTR MVIIYVIAF LICWVPYAS 
VAFYIFTHQ GSCFGPIFM TIPAFFAKS AAIYNPVIY IMMNKQFRN 
CMLTTICCG KN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainV
ProteinArrestin
UniProtP20443
Sequence
>5DGY_Chain_V
VIFKKVSRD KSVTIYLGK RDYVDHVSQ VEPVDGVVL VDPELVKGK 
KVYVTLTCA FRYGQEDID VMGLTFRRD LYFSRVQVY PPVGAMSVL 
TQLQESLLK KLGDNTYPF LLTFPDYLP CSVMLQPAP QDVGKSCGV 
DFEVKAFAS DITDPEEDK IPKKSSVRL LIRKVQHAP PEMGPQPSA 
EASWQFFMS DKPLNLSVS LSKEIYFHG EPIPVTVTV TNNTDKVVK 
KIKVSVEQI ANVVLYSSD YYVKPVASE ETQEKVQPN STLTKTLVL 
VPLLANNRE RRGIALDGK IKHEDTNLA SSTIIKEGI DRTVMGILV 
SYHIKVKLT VSGFLTSSE VATEVPFRL MHPQP


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8P15ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.92024-11-20To be published
8P15 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.92024-11-20To be published
8P13ASensoryOpsinRhodopsinBos taurus--Gi1/β1/γT15.22024-11-20To be published
8P13 (No Gprot) ASensoryOpsinRhodopsinBos taurus--5.22024-11-20To be published
8P12ASensoryOpsinsRhodopsinBos taurus--Gi1/β1/γT13.212024-11-20To be published
8P12 (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.212024-11-20To be published
9EPRASensoryOpsinsRhodopsinHasarius adansoniRetinal-Gi1/β1/γ24.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPR (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoniRetinal-4.92024-10-30doi.org/10.1038/s41467-024-53208-2
9EPQASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.152024-10-2310.1038/s41467-024-53208-2
9EPQ (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.152024-10-2310.1038/s41467-024-53208-2
9EPPASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-chim(Gi1-CtGq)/β1/γ24.062024-10-2310.1038/s41467-024-53208-2
9EPP (No Gprot) ASensoryOpsinsRhodopsinHasarius adansoni11,20-Ethanoretinal-4.062024-10-2310.1038/s41467-024-53208-2
8FD1ASensoryOpsinsRhodopsinBos taurus---4.252023-08-3010.1038/s41467-023-40911-9
8FD1 (Multimeric) ASensoryOpsinsRhodopsinBos taurus--4.252023-08-3010.1038/s41467-023-40911-9
8FD0ASensoryOpsinsRhodopsinBos taurus---3.712023-08-3010.1038/s41467-023-40911-9
8FD0 (Multimeric) ASensoryOpsinsRhodopsinBos taurus--3.712023-08-3010.1038/s41467-023-40911-9
8FCZASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.72023-08-3010.1038/s41467-023-40911-9
8FCZ (Multimeric) ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal-3.72023-08-3010.1038/s41467-023-40911-9
8A6EASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6DASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
8A6CASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBEASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7ZBCASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--1.82023-03-2910.1038/s41586-023-05863-6
7MTBASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK142021-07-0710.1038/s41586-021-03721-x
7MTB (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-42021-07-0710.1038/s41586-021-03721-x
7MTAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK14.12021-07-0710.1038/s41586-021-03721-x
7MTA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.12021-07-0710.1038/s41586-021-03721-x
7MT9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK172021-07-0710.1038/s41586-021-03721-x
7MT9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-72021-07-0710.1038/s41586-021-03721-x
7MT8ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-GRK15.82021-07-0710.1038/s41586-021-03721-x
7MT8 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-5.82021-07-0710.1038/s41586-021-03721-x
6PH7ASensoryOpsinsRhodopsinBos taurus-NerolGt(CT)2.92020-07-01To be published
6PH7 (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Nerol2.92020-07-01To be published
6PGSASensoryOpsinsRhodopsinBos taurus-GeraniolGt(CT)2.92020-07-01To be published
6PGS (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Geraniol2.92020-07-01To be published
6PELASensoryOpsinsRhodopsinBos taurus-CitronellolGt(CT)3.192020-06-24To be published
6PEL (No Gprot) ASensoryOpsinsRhodopsinBos taurus-Citronellol3.192020-06-24To be published
6NWEASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)2.712020-02-12To be published
6NWE (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-2.712020-02-12To be published
6OFJASensoryOpsinsRhodopsinBos taurus---4.52019-08-2110.1074/jbc.RA119.010089
6OFJ (Multimeric) ASensoryOpsinsRhodopsinBos taurus--4.52019-08-2110.1074/jbc.RA119.010089
6OYAASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.32019-07-2410.1016/j.molcel.2019.06.007
6OYA (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32019-07-2410.1016/j.molcel.2019.06.007
6OY9ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt/β1/γ13.92019-07-2410.1016/j.molcel.2019.06.007
6OY9 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.92019-07-2410.1016/j.molcel.2019.06.007
6QNOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gi1/β1/γ14.382019-07-1010.7554/eLife.46041
6QNO (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-4.382019-07-1010.7554/eLife.46041
6I9KASensoryOpsinsRhodopsinHasarius adansoni9-cis-Retinal--2.152019-07-0310.1073/pnas.1902192116
6FUFASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Go3.122018-10-0310.1126/sciadv.aat7052
6FUF (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.122018-10-0310.1126/sciadv.aat7052
6CMOASensoryOpsinsRhodopsinHomo sapiens--Gi1/β1/γ24.52018-06-2010.1038/s41586-018-0215-y
6CMO (No Gprot) ASensoryOpsinsRhodopsinHomo sapiens--4.52018-06-2010.1038/s41586-018-0215-y
6FKDASensoryOpsinsRhodopsinBos taurus-PubChem 137349183-2.492018-04-0410.1073/pnas.1718084115
6FKCASensoryOpsinsRhodopsinBos taurus-PubChem 132473039-2.462018-04-0410.1073/pnas.1718084115
6FKBASensoryOpsinsRhodopsinBos taurus-PubChem 132473038-3.032018-04-0410.1073/pnas.1718084115
6FKAASensoryOpsinsRhodopsinBos taurus-PubChem 132473037-2.72018-04-0410.1073/pnas.1718084115
6FK9ASensoryOpsinsRhodopsinBos taurus-PubChem 132473036-2.632018-04-0410.1073/pnas.1718084115
6FK8ASensoryOpsinsRhodopsinBos taurus-PubChem 132473035-2.872018-04-0410.1073/pnas.1718084115
6FK7ASensoryOpsinsRhodopsinBos taurus-PubChem 132473034-2.622018-04-0410.1073/pnas.1718084115
6FK6ASensoryOpsinsRhodopsinBos taurus-PubChem 132473033-2.362018-04-0410.1073/pnas.1718084115
5WKTASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Gt(CT)3.22017-12-1310.1038/nprot.2017.135
5WKT (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-3.22017-12-1310.1038/nprot.2017.135
5W0PASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.012017-08-0910.1016/j.cell.2017.07.002
5TE5ASensoryOpsinsRhodopsinBos taurus20-Methanoretinal--4.012017-03-1510.1073/pnas.1617446114
5TE3ASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside--2.72017-03-1510.1073/pnas.1617446114
5DYSASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.32016-08-1010.15252/embr.201642671
5EN0ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.812016-08-1010.15252/embr.201642671
5EN0 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.812016-08-1010.15252/embr.201642671
5DGYASensoryOpsinsRhodopsinHomo sapiens--Arrestin17.72016-03-2310.1038/sdata.2016.21
4X1HASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-Gt(CT)2.292015-11-0410.1016/j.str.2015.09.015
4X1H (No Gprot) ASensoryOpsinsRhodopsinBos taurusNonyl-β-D-Glucopyranoside-2.292015-11-0410.1016/j.str.2015.09.015
4ZWJASensoryOpsinsRhodopsinHomo sapiens--Arrestin13.32015-07-2910.1038/nature14656
4WW3ASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82015-06-1710.1371/journal.pone.0126970
4PXFASensoryOpsinsRhodopsinBos taurusOctyl-β-D-Glucopyranoside-Arrestin1 Finger Loop2.752014-09-1710.1038/ncomms5801
4J4QASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-Gt(CT)2.652013-10-3010.1002/anie.201302374
4J4Q (No Gprot) ASensoryOpsinsRhodopsinBos taurusOctyl β-D-Glucopyranoside-2.652013-10-3010.1002/anie.201302374
4BEYASensoryOpsinsRhodopsinBos taurus--Gt(CT)2.92013-05-0810.1038/embor.2013.44
4BEY (No Gprot) ASensoryOpsinsRhodopsinBos taurus--2.92013-05-0810.1038/embor.2013.44
4BEZASensoryOpsinsRhodopsinBos taurus---3.32013-04-2410.1038/embor.2013.44
4A4MASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)3.32012-01-2510.1073/pnas.1114089108
4A4M (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-3.32012-01-2510.1073/pnas.1114089108
3AYNASensoryOpsinsRhodopsinTodarodes pacificus9-cis-Retinal--2.72011-08-1710.1016/j.jmb.2011.08.044
3AYMASensoryOpsinsRhodopsinTodarodes pacificusAll-trans-Retinal--2.82011-08-1710.1016/j.jmb.2011.08.044
2X72ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)32011-03-1610.1038/nature09795
2X72 (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-32011-03-1610.1038/nature09795
3PXOASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--32011-03-0910.1038/nature09789
3PQRASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-Gt(CT)2.852011-03-0910.1038/nature09789
3PQR (No Gprot) ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal-2.852011-03-0910.1038/nature09789
3OAXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62011-01-1910.1016/j.bpj.2010.08.003
3DQBASensoryOpsinsRhodopsinBos taurus--Gt(CT)3.22008-09-2310.1038/nature07330
3DQB (No Gprot) ASensoryOpsinsRhodopsinBos taurus--3.22008-09-2310.1038/nature07330
3C9MASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42008-08-0510.1107/S0907444908017162
3C9LASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652008-08-0510.1107/S0907444908017162
3CAPASensoryOpsinsRhodopsinBos taurus---2.92008-06-2410.1038/nature07063
3CAP (Multimeric) ASensoryOpsinsRhodopsinBos taurus--2.92008-06-2410.1038/nature07063
2Z73ASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--2.52008-05-1310.1038/nature06925
2ZIYASensoryOpsinsRhodopsinTodarodes pacificus11-cis-Retinal--3.72008-05-0610.1074/jbc.C800040200
2PEDASensoryOpsinsRhodopsinBos taurus9-cis-Retinal--2.952007-10-3010.1529/biophysj.107.108225
2J4YASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.42007-09-2510.1016/j.jmb.2007.03.007
2I37ASensoryOpsinsRhodopsinBos taurus---4.152006-10-1710.1073/pnas.0608022103
2I36ASensoryOpsinsRhodopsinBos taurus---4.12006-10-1710.1073/pnas.0608022103
2I35ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--3.82006-10-1710.1073/pnas.0608022103
2G87ASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.62006-09-0210.1002/anie.200600595
2HPYASensoryOpsinsRhodopsinBos taurusAll-trans-Retinal--2.82006-08-2210.1073/pnas.0601765103
1U19ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.22004-10-1210.1016/j.jmb.2004.07.044
1GZMASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.652003-11-2010.1016/j.jmb.2004.08.090
1L9HASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.62002-05-1510.1073/pnas.082666399
1HZXASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82001-07-0410.1021/bi0155091
1F88ASensoryOpsinsRhodopsinBos taurus11-cis-Retinal--2.82000-08-0410.1126/science.289.5480.739




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

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