Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y55 6.1975437
2R:R:N66 5.6675409
3R:R:V72 3.45507
4R:R:V82 6417
5R:R:D84 9.9625418
6R:R:Y86 5.64333617
7R:R:W104 5.4175426
8R:R:W112 5.82889929
9R:R:F114 5.99426
10R:R:F130 8.065407
11R:R:Y131 9.3625467
12R:R:I140 4.7425419
13R:R:R144 6.402519
14R:R:Y145 6.718578
15R:R:V162 4.07417
16R:R:W170 4.695409
17R:R:F183 9.2625405
18R:R:R184 5.442555
19R:R:Y197 5.3025403
20R:R:E198 6.31455
21R:R:P223 6.962509
22R:R:Y231 7.25333619
23R:R:I253 4.52417
24R:R:F260 9.35409
25R:R:Y267 5.34407
26R:R:H306 8.1575409
27R:R:N310 6.455419
28R:R:Y314 5.29833619
29R:R:I317 2.8475496
30R:R:F321 4.586518
31W:W:?1 9.81751210
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:I304 R:R:Y55 13.78297.25NoYes077
2R:R:F59 R:R:P102 19.90748.67NoNo079
3R:R:L101 R:R:P102 19.22451.64NoNo089
4R:R:I304 R:R:L101 18.57184.28NoNo078
5R:R:F59 R:R:L63 21.2734.87NoNo075
6R:R:L63 R:R:S67 22.26871.5NoNo053
7R:R:L95 R:R:S67 23.48691.5NoNo073
8R:R:L95 R:R:N66 24.76242.75NoYes079
9R:R:N66 R:R:P311 25.030111.4YesNo099
10R:R:P311 R:R:V69 25.42713.53NoNo098
11R:R:F321 R:R:V69 13.8015.24YesNo188
12R:R:F321 R:R:V72 15.88867.87YesYes087
13R:R:V69 R:R:Y314 12.91065.05NoYes189
14R:R:Y314 W:W:?1 93.12064.82YesYes190
15R:R:I73 W:W:?1 19.23665.03NoYes060
16R:R:F321 W:W:?1 17.9134.3YesYes180
17R:R:I73 R:R:L88 18.219811.42NoNo065
18R:R:R144 W:W:?1 18.43349.29YesYes190
19R:R:D143 R:R:R144 13.89725.96NoYes089
20R:R:T83 W:W:?1 18.779311.27NoYes170
21R:R:I140 R:R:T83 18.6536.08YesNo197
22R:R:I140 R:R:Y86 37.51054.84YesYes197
23R:R:I253 W:W:?1 49.11264.2YesYes170
24R:R:I140 R:R:I253 18.00634.42YesYes197
25R:R:V162 R:R:Y86 14.31843.79YesYes177
26R:R:I165 R:R:Y86 12.06237.25NoYes057
27R:R:L88 R:R:M70 15.97582.83NoNo056
28R:R:L92 R:R:M70 14.98012.83NoNo066
29R:R:L92 R:R:W170 12.28196.83NoYes069
30R:R:D94 R:R:H306 11.77366.3NoYes099
31R:R:H306 R:R:N310 93.83657.65YesYes099
32R:R:L271 R:R:Y267 22.82824.69NoYes067
33R:R:L271 R:R:R212 23.82384.86NoNo065
34R:R:E198 R:R:R212 31.41328.14YesNo055
35R:R:K126 R:R:R184 56.83436.19NoYes065
36R:R:K126 R:R:W104 55.74846.96NoYes066
37R:R:V122 R:R:W104 26.05886.13NoYes256
38R:R:S107 R:R:W112 25.0064.94NoYes059
39R:R:S107 R:R:W104 26.20624.94NoYes056
40R:R:V122 R:R:W112 25.12034.9NoYes259
41R:R:T186 R:R:W112 22.98162.43NoYes049
42R:R:T186 R:R:Y188 15.37424.99NoNo041
43R:R:P194 R:R:Y188 12.82645.56NoNo051
44R:R:G111 R:R:P194 10.27252.03NoNo045
45R:R:S132 R:R:W170 11.60813.71NoYes069
46R:R:E127 R:R:V180 87.49257.13NoNo044
47R:R:E198 R:R:V180 31.7264.28YesNo554
48R:R:E127 R:R:Y131 88.292610.1NoYes047
49R:R:F130 R:R:Y131 91.33685.16YesYes077
50R:R:F130 R:R:I134 50.09935.02YesNo078
51R:R:F130 R:R:W264 47.900416.04YesNo078
52R:R:F130 R:R:N268 10.88026.04YesNo078
53R:R:F260 R:R:I134 51.99437.54YesNo098
54R:R:F260 R:R:W264 48.321510.02YesNo098
55R:R:F260 R:R:H306 10011.31YesYes099
56R:R:I253 R:R:Y231 27.10873.63YesYes179
57R:R:S141 R:R:Y231 21.65513.99NoYes099
58R:R:C230 R:R:S141 20.50293.44NoNo079
59R:R:C230 R:R:Y145 17.01068.06NoYes078
60R:R:L155 R:R:V162 15.34414.47NoYes047
61R:R:I165 R:R:L155 10.18534.28NoNo054
62R:R:L155 R:R:L161 20.59622.77NoNo044
63R:R:L161 R:R:Y160 10.302616.41NoNo845
64R:R:V252 W:W:?1 11.21413.5NoYes070
65R:R:L296 R:R:Y267 10.51924.69NoYes057
66R:R:R184 R:R:V180 55.11973.92YesNo554
67R:R:F321 R:R:Y314 10.33874.13YesYes189
68R:R:N310 R:R:Y314 92.5378.14YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:V69 R:R:Y314 5.05 1 No Yes 8 9 2 1
R:R:F321 R:R:V69 5.24 1 Yes No 8 8 1 2
R:R:F321 R:R:V72 7.87 1 Yes Yes 8 7 1 2
R:R:I73 R:R:L88 11.42 0 No No 6 5 1 2
R:R:I73 W:W:?1 5.03 0 No Yes 6 0 1 0
R:R:D84 R:R:R80 3.57 1 Yes No 8 7 1 2
R:R:D84 R:R:S81 8.83 1 Yes No 8 7 1 1
R:R:S81 W:W:?1 10.59 1 No Yes 7 0 1 0
R:R:I140 R:R:T83 6.08 1 Yes No 9 7 2 1
R:R:R144 R:R:T83 5.17 1 Yes No 9 7 1 1
R:R:T83 W:W:?1 11.27 1 No Yes 7 0 1 0
R:R:D84 R:R:K320 8.3 1 Yes No 8 6 1 1
R:R:D84 W:W:?1 19.15 1 Yes Yes 8 0 1 0
R:R:L87 R:R:Y314 5.86 1 No Yes 7 9 1 1
R:R:L87 W:W:?1 4.07 1 No Yes 7 0 1 0
R:R:I140 R:R:Y231 3.63 1 Yes Yes 9 9 2 2
R:R:I140 R:R:I253 4.42 1 Yes Yes 9 7 2 1
R:R:D143 R:R:R144 5.96 0 No Yes 8 9 2 1
R:R:A147 R:R:R144 4.15 0 No Yes 8 9 2 1
R:R:M250 R:R:R144 7.44 0 No Yes 5 9 2 1
R:R:R144 W:W:?1 9.29 1 Yes Yes 9 0 1 0
R:R:I253 R:R:Y231 3.63 1 Yes Yes 7 9 1 2
R:R:E249 R:R:K320 6.75 1 No No 7 6 1 1
R:R:E249 W:W:?1 10.91 1 No Yes 7 0 1 0
R:R:I253 R:R:M250 5.83 1 Yes No 7 5 1 2
R:R:G318 R:R:V252 3.68 0 No No 7 7 2 1
R:R:I253 W:W:?1 4.2 1 Yes Yes 7 0 1 0
R:R:N310 R:R:V256 5.91 1 Yes No 9 8 2 2
R:R:V256 R:R:Y314 3.79 1 No Yes 8 9 2 1
R:R:N310 R:R:Y314 8.14 1 Yes Yes 9 9 2 1
R:R:F321 R:R:Y314 4.13 1 Yes Yes 8 9 1 1
R:R:Y314 W:W:?1 4.82 1 Yes Yes 9 0 1 0
R:R:K320 W:W:?1 30.68 1 No Yes 6 0 1 0
R:R:F321 W:W:?1 4.3 1 Yes Yes 8 0 1 0
R:R:V252 W:W:?1 3.5 0 No Yes 7 0 1 0
R:R:I317 R:R:V252 3.07 9 Yes No 6 7 2 1
R:R:A315 R:R:F321 1.39 0 No Yes 7 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

ShowSimilarityNetwork TypeNameLigandDescription
73.33Single5LWEVercirnon5LWE-CCR9-Vercirnon
53.85Single5T1APubChem 68764898; PubChem 120931705T1A-CCR2-PubChem 68764898; PubChem 12093170
53.33Single6QZHHY-133073; Na6QZH-CCR7-HY-133073; Na
37.50Single5X7DPubChem 1293189635X7D-β2-S-Carazolol-PubChem 129318963
31.82Single8FN0PubChem 1186104278FN0-NTS1-Neurotensin/Neuromedin-N-PubChem 118610427-chim(NtGi1-Go)/β1/γ2
27.78Single8JPFPubChem 1186104278JPF-NTS1-Neurotensin-PubChem 118610427
21.43Single3VG9Antibody3VG9-A2A-ZM-241385-Antibody
21.05Single8JPCPubChem 118610427; GDP; Mg8JPC-NTS1-Neurotensin-(8-13)-PubChem 118610427; GDP; Mg-Gq; GRK2
19.35Single3VGAAntibody3VGA-A2A-ZM-241385-Antibody
19.05Single8JPBPubChem 118610427; GDP; Mg8JPB-NTS1-Neurotensin-(8-13)-PubChem 118610427; GDP; Mg-Gq; GRK2
16.67Single8PJKt7m8PJK-5-HT1A-ST171-t7m-Gi1/β1/γ1
15.00Single5XF1NNC06405XF1-Glucagon-NNC0640
14.29Single8GW8KHF8GW8-PTH1-KHF-Gs/β1/γ2
13.04Single8JR9PCO3718JR9-PTH1-PCO371-chim(NtGi1-Gs)/β1/γ2
13.04Single8TB7PubChem 1685102188TB7-GPR61-PubChem 168510218
9.52Single8XQLAristolochic acid A8XQL-TAS2R14-Cholesterol-Aristolochic acid A-Gt3/β1/γ1
8.70Single8J20AR4206268J20-FFA3-Valeric acid-AR420626-Gi1/β1/γ2
8.00Single6LN2PubChem 681786306LN2-GLP-1-PubChem 68178630
6.67Single4PXFOctyl-Beta-D-Glucopyranoside4PXF-Rhodopsin-Octyl-β-D-Glucopyranoside-Arrestin1 Finger Loop
5.88Single7EB2rac-BHFF7EB2-GABAB2; GABAB1-Baclofen-rac-BHFF-Gi1/β1/γ2
5.88Single8PKMt7m8PKM-5-HT1A-Befiradol-t7m-Gi1/β1/γ1
5.56Single8XQPAristolochic acid A8XQP-TAS2R14-Cholesterol-Aristolochic acid A-Gt3/β1/γ1
5.26Single5VEXNNC06405VEX-GLP-1-NNC0640
5.26Single6KK7PubChem 681786306KK7-GLP-1-PubChem 68178630
5.26Single7CA3rac-BHFF7CA3-GABAB1, GABAB2-rac-BHFF
5.00Single4K5YCP-3763954K5Y-CRF1-CP-376395
5.00Single5VEWPF-063722225VEW-GLP-1-PF-06372222
5.00Single6KJVPubChem 681786306KJV-GLP-1-PubChem 68178630
5.00Single6KK1PubChem 681786306KK1-GLP-1-PubChem 68178630
5.00Single7C7QPubChem 70238487C7Q-GABAB1, GABAB2-Baclofen-PubChem 7023848
5.00Single7EJX(1R;2R)-2-PCCA7EJX-GPR88-(1R;2R)-2-PCCA-Gi1/β1/γ2
5.00Single8XQNAristolochic acid A8XQN-TAS2R14-Cholesterol-Aristolochic acid A-Gi1/β1/γ1
5.00Single8XQRFlufenamic acid8XQR-TAS2R14-Flufenamic acid-Gt3/β1/γ1
5.00Single8XQTCholesterol8XQT-TAS2R14-Cholesterol-Cholesterol-Gi1/β1/γ1
4.76Single5XEZNNC06405XEZ-Glucagon-NNC0640
4.76Single8RQLFlufenamic acid8RQL-TAS2R14-Flufenamic acid-Flufenamic acid-chim(NtGi1-Gt3)/β1/γ2
4.76Single8XQOAristolochic acid A8XQO-TAS2R14-Cholesterol-Aristolochic acid A-Gi1/β1/γ1
4.76Single8XQSFlufenamic acid8XQS-TAS2R14-Cholesterol-Flufenamic acid-Gi1/β1/γ1
4.55Single4Z9GCP-3763954Z9G-CRF1-CP-376395
4.55Single8GTIBMK-C2058GTI-CRF1-BMK-C205
4.35Single8GTGBMK-I1528GTG-CRF1-BMK-I152
4.00Single8GTMBMK-C2038GTM-CRF1-BMK-C203
3.85Single8JD3HZR; PEF8JD3-mGlu2; mGlu3-Glutamate-HZR; PEF-Gi1/β1/γ2

PDB Summary
PDB 6LFL
Class A
SubFamily Protein
Type Chemokine
SubType CXCR2
Species Homo Sapiens
Ligand -
Other Ligand(s) PubChem 153466996
Protein Partners -
PDB Resolution 3.2
Date 2020-09-02
D.O.I. 10.1038/s41586-020-2492-5
Net Summary
Imin 3.52
Number of Linked Nodes 257
Number of Links 278
Number of Hubs 31
Number of Links mediated by Hubs 127
Number of Communities 9
Number of Nodes involved in Communities 48
Number of Links involved in Communities 60
Path Summary
Number Of Nodes in MetaPath 69
Number Of Links MetaPath 68
Number of Shortest Paths 59669
Length Of Smallest Path 3
Average Path Length 15.6488
Length of Longest Path 32
Minimum Path Strength 1.38
Average Path Strength 6.3365
Maximum Path Strength 20.975
Minimum Path Correlation 0.7
Average Path Correlation 0.925126
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 42.6159
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.9731
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• UDP-glycosyltransferase activity   • alpha-1,4-glucan glucosyltransferase (NDP-glucose donor) activity   • glycosyltransferase activity   • alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity   • transferase activity   • glucosyltransferase activity   • hexosyltransferase activity   • catalytic activity   • UDP-glucosyltransferase activity   • G protein-coupled chemoattractant receptor activity   • molecular transducer activity   • interleukin-8 receptor activity   • C-X-C chemokine receptor activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • C-C chemokine receptor activity   • protein binding   • binding   • chemokine binding   • C-X-C chemokine binding   • interleukin-8 binding   • cytokine binding   • C-C chemokine binding   • developmental process   • multicellular organismal process   • head development   • animal organ development   • brain development   • nervous system development   • multicellular organism development   • central nervous system development   • midbrain development   • anatomical structure development   • system development   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • head development   • animal organ development   • brain development   • nervous system development   • multicellular organism development   • central nervous system development   • midbrain development   • anatomical structure development   • system development   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • localization   • import into cell   • receptor internalization   • transport   • cellular process   • receptor-mediated endocytosis   • endocytosis   • establishment of localization   • vesicle-mediated transport   • response to stimulus   • immune response   • immune system process   • defense response   • response to stress   • inflammatory response   • acute inflammatory response to antigenic stimulus   • acute inflammatory response   • inflammatory response to antigenic stimulus   • regulation of cellular process   • homeostatic process   • leukocyte apoptotic process   • negative regulation of biological process   • regulation of programmed cell death   • regulation of neutrophil apoptotic process   • negative regulation of leukocyte apoptotic process   • negative regulation of neutrophil apoptotic process   • negative regulation of cellular process   • regulation of immune system process   • myeloid cell homeostasis   • regulation of leukocyte apoptotic process   • myeloid cell apoptotic process   • regulation of biological process   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • neutrophil homeostasis   • neutrophil apoptotic process   • negative regulation of apoptotic process   • multicellular organismal-level homeostasis   • leukocyte homeostasis   • inflammatory cell apoptotic process   • negative regulation of myeloid cell apoptotic process   • homeostasis of number of cells   • apoptotic process   • programmed cell death   • regulation of myeloid cell apoptotic process   • neutrophil activation   • cell activation   • myeloid leukocyte activation   • granulocyte activation   • leukocyte activation   • cell chemotaxis   • cellular response to stimulus   • chemotaxis   • neutrophil chemotaxis   • response to external stimulus   • neutrophil migration   • granulocyte migration   • leukocyte migration   • cellular response to chemical stimulus   • taxis   • granulocyte chemotaxis   • response to chemical   • myeloid leukocyte migration   • cell migration   • cell motility   • leukocyte chemotaxis   • locomotion   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of chemotaxis   • positive regulation of cell migration   • positive regulation of neutrophil chemotaxis   • positive regulation of immune system process   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • positive regulation of granulocyte chemotaxis   • regulation of response to stimulus   • regulation of locomotion   • regulation of neutrophil chemotaxis   • regulation of neutrophil migration   • regulation of response to external stimulus   • positive regulation of biological process   • positive regulation of response to stimulus   • regulation of granulocyte chemotaxis   • positive regulation of response to external stimulus   • positive regulation of cell motility   • regulation of cell migration   • positive regulation of cellular process   • positive regulation of leukocyte migration   • positive regulation of neutrophil migration   • regulation of chemotaxis   • signaling   • intracellular signal transduction   • cell communication   • calcium-mediated signaling   • intracellular signaling cassette   • signal transduction   • positive regulation of cardiac muscle cell apoptotic process   • positive regulation of programmed cell death   • muscle cell apoptotic process   • positive regulation of striated muscle cell apoptotic process   • regulation of cardiac muscle cell apoptotic process   • regulation of muscle cell apoptotic process   • positive regulation of apoptotic process   • cardiac muscle cell apoptotic process   • positive regulation of muscle cell apoptotic process   • regulation of striated muscle cell apoptotic process   • striated muscle cell apoptotic process   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • dendritic cell chemotaxis   • dendritic cell migration   • mononuclear cell migration   • cell surface receptor signaling pathway   • regulation of developmental process   • angiogenesis   • regulation of vasculature development   • positive regulation of developmental process   • tube morphogenesis   • regulation of multicellular organismal process   • regulation of anatomical structure morphogenesis   • blood vessel development   • regulation of multicellular organismal development   • blood vessel morphogenesis   • tube development   • positive regulation of angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • positive regulation of vasculature development   • regulation of angiogenesis   • anatomical structure formation involved in morphogenesis   • positive regulation of multicellular organismal process   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • regulation of vascular permeability   • system process   • circulatory system process   • positive regulation of vascular permeability   • vascular process in circulatory system   • blood circulation   • cellular defense response   • epithelium development   • kidney epithelium development   • metanephric tubule morphogenesis   • morphogenesis of an epithelium   • metanephric epithelium development   • tissue development   • renal system development   • tissue morphogenesis   • metanephros development   • metanephric tubule development   • epithelial tube morphogenesis   • kidney development   • response to cytokine   • cytokine-mediated signaling pathway   • response to peptide   • cellular response to interleukin-8   • response to interleukin-8   • cellular response to cytokine stimulus   • interleukin-8-mediated signaling pathway   • cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • membrane-bounded organelle   • intracellular anatomical structure   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • mast cell granule
Gene OntologyCellular Component• cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • membrane-bounded organelle   • intracellular anatomical structure   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • mast cell granule   • organelle   • cytoplasm   • lysosome   • mitotic spindle   • cytoskeleton   • spindle   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • vesicle   • organelle membrane   • secretory granule membrane
SCOP2Domain Identifier• G protein-coupled receptor-like   • Type B glycosyltransferase-like
SCOP2Family Identifier• G protein-coupled receptor-like   • Type B glycosyltransferase-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeEBX
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeEBX
Name4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide
Synonyms
Identifier
FormulaC22 H26 N4 O5
Molecular Weight426.466
SMILES
PubChem153466996
Formal Charge0
Total Atoms57
Total Chiral Atoms1
Total Bonds59
Total Aromatic Bonds11

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP25025
Sequence
>6LFL_Chain_R
INKYFVVII YALVFLLSL LGNSLVMLV ILYSRVGRS VTDVYLLNL 
ALADLLFAL TLPIWAASK VNGWIFGTF LCKVVSLLK EVNFYSGIW 
LLACISVDR YLAIVHATR TLTQKRYLV KFICLSIWG LSLLLALPV 
LLFRRTVYS SNVSPACYE DANWRMLLR ILPQSFGFI VPLLIMLFC 
YGFTLRTLF KAGQKHREM RVIFAVVLI FLLCWLPYN LVLLADTLM 
RTRNHIDRA LDATEILAI LHSCLNPLI YAFIGQKFR HGLLKILAI 
HGLIS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8XWSAProteinChemokineCXCR2Homo sapiensCXCL5--3.062025-01-15To be published
8XWNAProteinChemokineCXCR2Homo sapiensCXCL8--3.292025-01-15To be published
8XWMAProteinChemokineCXCR2Homo sapiensCXCL6--3.712025-01-15To be published
8XWFAProteinChemokineCXCR2Homo sapiensCXCL3--3.652025-01-15To be published
8XWAAProteinChemokineCXCR2Homo sapiensCXCL1--3.482025-01-15To be published
8XVUAProteinChemokineCXCR2Homo sapiensCXCL2--3.092025-01-15To be published
8XXXAProteinChemokineCXCR2Homo sapiensCXCL6-Go/β1/γ23.172025-01-15To be published
8XXX (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL6-3.172025-01-15To be published
8XXRAProteinChemokineCXCR2Homo sapiens--Go/β1/γ23.172025-01-15To be published
8XXR (No Gprot) AProteinChemokineCXCR2Homo sapiens--3.172025-01-15To be published
8XXHAProteinChemokineCXCR2Homo sapiensCXCL2-Go/β1/γ22.82025-01-15To be published
8XXH (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL2-2.82025-01-15To be published
8XX7AProteinChemokineCXCR2Homo sapiensCXCL5-Go/β1/γ23.322025-01-15To be published
8XX7 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL5-3.322025-01-15To be published
8XX6AProteinChemokineCXCR2Homo sapiensCXCL8-Go/β1/γ22.992025-01-15To be published
8XX6 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL8-2.992025-01-15To be published
8XX3AProteinChemokineCXCR2Homo sapiensCXCL3-Go/β1/γ23.382025-01-15To be published
8XX3 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL3-3.382025-01-15To be published
8XWVAProteinChemokineCXCR2Homo sapiensCXCL1-Go/β1/γ23.072025-01-15To be published
8XWV (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL1-3.072025-01-15To be published
6LFLAProteinChemokineCXCR2Homo sapiens-PubChem 153466996-3.22020-09-0210.1038/s41586-020-2492-5
6LFOAProteinChemokineCXCR2Homo sapiensInterleukin-8-Gi1/β1/γ23.42020-09-0210.1038/s41586-020-2492-5
6LFO (No Gprot) AProteinChemokineCXCR2Homo sapiensInterleukin-8-3.42020-09-0210.1038/s41586-020-2492-5
6LFMAProteinChemokineCXCR2Homo sapiensInterleukin-8-Gi1/β1/γ23.52020-09-0210.1038/s41586-020-2492-5
6LFM (No Gprot) AProteinChemokineCXCR2Homo sapiensInterleukin-8-3.52020-09-0210.1038/s41586-020-2492-5




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 6LFL.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.