Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:E40 7.645616
2L:L:L41 3.34416
3L:L:R42 8.4325418
4L:L:Q44 8.385415
5L:L:R63 7.8075415
6L:L:P65 3.865406
7L:L:P67 4.13667616
8L:L:H68 7.14618
9L:L:E73 4.7775419
10L:L:V74 4.2175468
11L:L:L78 2.495407
12L:L:I100 4.0825455
13N:N:I52 3.3025409
14N:N:V74 3.135478
15N:N:L86 4.1075479
16N:N:P88 2.09408
17N:N:V93 3.0925478
18N:N:I96 3.9975487
19R:R:Y55 5.0025407
20R:R:Y86 4.565607
21R:R:L90 3.914529
22R:R:D94 5.825429
23R:R:K108 4.1525405
24R:R:W112 5.56714719
25R:R:V128 2.5775405
26R:R:Y131 7.78437
27R:R:Y145 7.125448
28R:R:V149 6.0225447
29R:R:R159 5.7154123
30R:R:W170 5.082509
31R:R:L176 6.875434
32R:R:R184 7.95833615
33R:R:V187 3.674513
34R:R:Y197 7.824513
35R:R:R208 12.025414
36R:R:R212 7.406515
37R:R:L214 8.1475433
38R:R:F220 6.23508
39R:R:P223 3.2125409
40R:R:Y231 8.092529
41R:R:M243 2.3575404
42R:R:W264 8.18438
43R:R:D274 5.65514
44R:R:R278 8.3875414
45R:R:I292 4.435405
46R:R:S307 4.77408
47R:R:Y314 6.00667629
48R:R:F316 3.205406
49R:R:F321 4.3345118
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:E40 L:L:T39 19.77817.06YesNo061
2L:L:T39 R:R:D297 18.49672.89NoNo014
3R:R:D297 R:R:K108 18.41334.15NoYes045
4R:R:K108 R:R:W104 17.16823.48YesNo056
5R:R:W104 R:R:W112 32.33533.75NoYes069
6R:R:S107 R:R:W112 13.81648.65NoYes059
7R:R:G111 R:R:S107 13.06391.86NoNo045
8R:R:G111 R:R:S193 12.30951.86NoNo043
9L:L:E40 R:R:Y197 51.69453.37YesYes163
10R:R:E198 R:R:Y197 39.55817.86NoYes153
11R:R:E198 R:R:R184 42.033115.12NoYes155
12R:R:C119 R:R:R184 20.86172.79NoYes195
13R:R:C119 R:R:W112 20.72415.22NoYes199
14R:R:R208 R:R:R212 26.9614.26YesYes145
15R:R:C196 R:R:R184 20.86174.18NoYes195
16R:R:C196 R:R:W112 20.72419.14NoYes199
17L:L:H68 L:L:L41 51.65993.86YesYes186
18L:L:L41 R:R:Y197 52.5033.52YesYes163
19L:L:H68 R:R:V187 51.74164.15YesYes183
20R:R:V187 R:R:Y197 61.57433.79YesYes133
21L:L:E73 L:L:R63 89.62954.65YesYes195
22L:L:H68 L:L:R63 10016.93YesYes185
23L:L:C45 L:L:E73 87.30186.08NoYes099
24L:L:C45 L:L:C85 86.84747.28NoNo099
25L:L:I52 L:L:L78 70.93144.28NoYes097
26L:L:L78 L:L:N80 75.66582.75YesNo076
27L:L:K82 L:L:N80 77.54714.2NoNo026
28L:L:K82 R:R:A37 78.48524.82NoNo027
29R:R:A37 R:R:P38 79.42141.87NoNo077
30L:L:C85 R:R:P38 85.92543.77NoNo097
31L:L:I52 L:L:I57 48.58511.77NoNo098
32L:L:I52 L:L:L86 23.22492.85NoNo099
33L:L:I57 L:L:L54 47.5927.14NoNo085
34L:L:I100 L:L:L54 43.49035.71YesNo555
35L:L:L86 L:L:V74 13.80665.96NoYes098
36L:L:V62 L:L:V74 10.70864.81NoYes678
37N:N:S90 N:N:V93 10.53731.62NoYes088
38N:N:V60 N:N:V74 30.24711.6NoYes078
39N:N:V60 N:N:V62 31.26411.6NoNo077
40L:L:I100 N:N:V62 40.5913.07YesNo057
41N:N:L86 N:N:V74 14.70915.96YesYes798
42N:N:I52 N:N:L86 12.71422.85YesYes099
43R:R:K126 R:R:W104 45.114312.76NoNo066
44R:R:F97 R:R:K126 44.51797.44NoNo066
45R:R:F97 R:R:S307 45.0693.96NoYes068
46R:R:D94 R:R:S307 35.65254.42YesYes098
47R:R:D94 R:R:N66 20.53076.73YesNo099
48R:R:N66 R:R:P311 17.17974.89NoNo099
49R:R:F316 R:R:P311 14.63192.89YesNo069
50R:R:F316 R:R:V69 12.10012.62YesNo068
51R:R:I73 R:R:V69 10.39273.07NoNo068
52R:R:L271 R:R:R212 54.066613.36NoYes065
53R:R:L271 R:R:Q216 50.69096.65NoNo065
54R:R:N268 R:R:Q216 48.85393.96NoNo085
55R:R:F220 R:R:N268 48.490915.71YesNo088
56R:R:F220 R:R:F260 47.4343.22YesNo089
57R:R:F260 R:R:M227 38.08498.71NoNo098
58R:R:M227 R:R:Y231 25.34774.79NoYes289
59R:R:R144 R:R:Y231 24.27748.23NoYes299
60R:R:I140 R:R:R144 16.97656.26NoNo299
61R:R:I140 R:R:Y86 19.5356.04NoYes097
62R:R:C166 R:R:Y86 11.40442.69NoYes077
63R:R:C166 R:R:N89 10.78586.3NoNo079
64R:R:N89 R:R:W170 10.16554.52NoYes099
65R:R:D94 R:R:N310 12.55188.08YesNo299
66R:R:F260 R:R:W264 13.45345.01NoYes098
67R:R:M227 R:R:S141 12.25984.6NoNo289
68R:R:C230 R:R:S141 13.32395.16NoNo079
69R:R:C230 R:R:Y145 12.08866.72NoYes078
70R:R:N310 R:R:Y314 12.06373.49NoYes299
71L:L:E40 R:R:R212 26.28666.98YesYes165
72R:R:R208 R:R:Y197 25.972420.58YesYes143
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:S36 R:R:S43 3.26 0 No No 2 5 0 1
L:L:S36 R:R:V192 4.85 0 No No 2 5 0 1
L:L:V37 R:R:K48 6.07 0 No No 1 4 0 1
L:L:V37 R:R:S193 3.23 0 No No 1 3 0 1
L:L:V38 R:R:V192 8.02 0 No No 2 5 0 1
L:L:V38 R:R:D293 2.92 0 No No 2 4 0 1
L:L:T39 R:R:L296 2.95 0 No No 1 5 0 1
L:L:T39 R:R:D297 2.89 0 No No 1 4 0 1
L:L:E40 R:R:Y197 3.37 1 Yes Yes 6 3 0 1
L:L:E40 R:R:R208 16.28 1 Yes Yes 6 4 0 1
L:L:E40 R:R:R212 6.98 1 Yes Yes 6 5 0 1
L:L:E40 R:R:D274 5.2 1 Yes Yes 6 4 0 1
L:L:E40 R:R:R278 6.98 1 Yes Yes 6 4 0 1
L:L:L41 R:R:V187 2.98 1 Yes Yes 6 3 0 1
L:L:L41 R:R:S189 3 1 Yes No 6 1 0 1
L:L:L41 R:R:Y197 3.52 1 Yes Yes 6 3 0 1
L:L:R42 R:R:D274 4.76 1 Yes Yes 8 4 0 1
L:L:R42 R:R:R278 9.6 1 Yes Yes 8 4 0 1
L:L:R42 R:R:R289 7.46 1 Yes No 8 3 0 1
L:L:R42 R:R:D293 11.91 1 Yes No 8 4 0 1
L:L:Q44 R:R:N191 15.85 1 Yes No 5 2 0 1
L:L:L46 R:R:R289 3.64 0 No No 6 3 0 1
L:L:Q47 R:R:A36 6.06 0 No No 3 5 0 1
L:L:L49 R:R:A36 3.15 0 No No 5 5 0 1
L:L:P67 R:R:R185 4.32 1 Yes No 6 4 0 1
L:L:P67 R:R:V187 3.53 1 Yes Yes 6 3 0 1
L:L:P67 R:R:D199 4.83 1 Yes No 6 4 0 1
L:L:P67 R:R:T204 3.5 1 Yes No 6 3 0 1
L:L:H68 R:R:V187 4.15 1 Yes Yes 8 3 0 1
L:L:H68 R:R:S189 8.37 1 Yes No 8 1 0 1
L:L:K82 R:R:A37 4.82 0 No No 2 7 0 1
L:L:K83 R:R:P38 3.35 0 No No 5 7 0 1
L:L:C85 R:R:P38 3.77 0 No No 9 7 0 1
N:N:G81 R:R:Y188 8.69 0 No No 7 1 0 1
R:R:C39 R:R:R289 9.75 0 No No 8 3 2 1
R:R:N191 R:R:P41 4.89 0 No No 2 4 1 2
R:R:K48 R:R:N47 11.19 0 No No 4 4 1 2
R:R:D297 R:R:K108 4.15 0 No Yes 4 5 1 2
R:R:R185 R:R:V187 3.92 1 No Yes 4 3 1 1
R:R:D199 R:R:R185 22.63 1 No No 4 4 1 1
R:R:T186 R:R:Y188 3.75 0 No No 4 1 2 1
R:R:V187 R:R:Y197 3.79 1 Yes Yes 3 3 1 1
R:R:P194 R:R:Y188 5.56 0 No No 5 1 2 1
R:R:P194 R:R:S193 3.56 0 No No 5 3 2 1
R:R:E198 R:R:Y197 7.86 1 No Yes 5 3 2 1
R:R:R208 R:R:Y197 20.58 1 Yes Yes 4 3 1 1
R:R:E198 R:R:R208 6.98 1 No Yes 5 4 2 1
R:R:M200 R:R:T204 4.52 0 No No 5 3 2 1
R:R:M200 R:R:W207 11.63 0 No No 5 3 2 2
R:R:N203 R:R:N206 12.26 0 No No 4 1 1 2
R:R:N203 R:R:W207 3.39 0 No No 4 3 1 2
R:R:R208 R:R:R212 4.26 1 Yes Yes 4 5 1 1
R:R:M209 R:R:R278 7.44 0 No Yes 3 4 2 1
R:R:L271 R:R:R212 13.36 0 No Yes 6 5 2 1
R:R:D274 R:R:R212 5.96 1 Yes Yes 4 5 1 1
R:R:R212 R:R:T275 6.47 1 Yes No 5 4 1 2
R:R:L296 R:R:V270 5.96 0 No No 5 4 1 2
R:R:D274 R:R:R278 9.53 1 Yes Yes 4 4 1 1
R:R:D274 R:R:I292 2.8 1 Yes Yes 4 5 1 2
R:R:I292 R:R:L296 2.85 0 Yes No 5 5 2 1
L:L:Q47 R:R:L33 2.66 0 No No 3 3 0 1
R:R:A37 R:R:P38 1.87 0 No No 7 7 1 1
R:R:G111 R:R:S193 1.86 0 No No 4 3 2 1
R:R:G201 R:R:T204 1.82 0 No No 4 3 2 1
L:L:P65 R:R:N202 1.63 0 Yes No 6 2 0 1
L:L:A70 R:R:N203 1.56 0 No No 1 4 0 1
R:R:N191 R:R:S190 1.49 0 No No 2 2 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8XX3_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.69
Number of Linked Nodes 380
Number of Links 424
Number of Hubs 49
Number of Links mediated by Hubs 184
Number of Communities 13
Number of Nodes involved in Communities 81
Number of Links involved in Communities 106
Path Summary
Number Of Nodes in MetaPath 73
Number Of Links MetaPath 72
Number of Shortest Paths 174431
Length Of Smallest Path 3
Average Path Length 22.2184
Length of Longest Path 45
Minimum Path Strength 1.22
Average Path Strength 5.94165
Maximum Path Strength 13.49
Minimum Path Correlation 0.7
Average Path Correlation 0.949552
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.94118
Average % Of Corr. Nodes 48.3731
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.5568
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainL
ProteinCXCL3
UniProtP19876
Sequence
>8XX3_nogp_Chain_L
ASVVTELRC QCLQTLQGI HLKNIQSVN VRSPGPHCA QTEVIATLK 
NGKKACLNP ASPMVQKII EKIL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainN
ProteinCXCL3
UniProtP19876
Sequence
>8XX3_nogp_Chain_N
GIHLKNIQS VNVRSPGPH CAQTEVIAT LKNGKKACL NPASPMVQK 
IIEKILNK


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainR
ProteinReceptor
UniProtP25025
Sequence
>8XX3_nogp_Chain_R
LLDAAPCEP ESLEINKYF VVIIYALVF LLSLLGNSL VMLVILYSR 
VGRSVTDVY LLNLALADL LFALTLPIW AASKVNGWI FGTFLCKVV 
SLLKEVNFY SGILLLACI SVDRYLAIV HATRTLTQK RYLVKFICL 
SIWGLSLLL ALPVLLFRR TVYSSNVSP ACYEDMGNN TANWRMLLR 
ILPQSFGFI VPLLIMLFC YGFTLRTLF KAHMGQKHR AMRVIFAVV 
LIFLLCWLP YNLVLLADT LMRTQVIQE TCERRNHID RALDATEIL 
GILHSCLNP LIYAFIGQK FRHGLLKIL A


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6LFLAProteinChemokineCXCR2Homo sapiens-PubChem 153466996-3.22020-09-02doi.org/10.1038/s41586-020-2492-5
6LFMAProteinChemokineCXCR2Homo sapiensCXCL8-Gi1/β1/γ23.52020-09-02doi.org/10.1038/s41586-020-2492-5
6LFM (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL8-3.52020-09-02doi.org/10.1038/s41586-020-2492-5
6LFOAProteinChemokineCXCR2Homo sapiensCXCL8-Gi1/β1/γ23.42020-09-02doi.org/10.1038/s41586-020-2492-5
6LFO (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL8-3.42020-09-02doi.org/10.1038/s41586-020-2492-5
8XVUAProteinChemokineCXCR2Homo sapiensCXCL2--3.092025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWAAProteinChemokineCXCR2Homo sapiensCXCL1--3.482025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWFAProteinChemokineCXCR2Homo sapiensCXCL3--3.652025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWMAProteinChemokineCXCR2Homo sapiensCXCL6--3.712025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWNAProteinChemokineCXCR2Homo sapiensCXCL8--3.292025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWSAProteinChemokineCXCR2Homo sapiensCXCL5--3.062025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWVAProteinChemokineCXCR2Homo sapiensCXCL1-Go/β1/γ23.072025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XWV (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL1-3.072025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX3AProteinChemokineCXCR2Homo sapiensCXCL3-Go/β1/γ23.382025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX3 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL3-3.382025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX6AProteinChemokineCXCR2Homo sapiensCXCL8-Go/β1/γ22.992025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX6 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL8-2.992025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX7AProteinChemokineCXCR2Homo sapiensCXCL5-Go/β1/γ23.322025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XX7 (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL5-3.322025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXHAProteinChemokineCXCR2Homo sapiensCXCL2-Go/β1/γ22.82025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXH (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL2-2.82025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXRAProteinChemokineCXCR2Homo sapiens--Go/β1/γ23.172025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXR (No Gprot) AProteinChemokineCXCR2Homo sapiens--3.172025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXXAProteinChemokineCXCR2Homo sapiensCXCL6-Go/β1/γ23.172025-01-15doi.org/10.1016/j.molcel.2025.01.024
8XXX (No Gprot) AProteinChemokineCXCR2Homo sapiensCXCL6-3.172025-01-15doi.org/10.1016/j.molcel.2025.01.024




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8XX3_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.