Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y27 8.116545
2R:R:F30 9.845442
3R:R:V43 3.965426
4R:R:L47 5.066527
5R:R:T54 4.1075407
6R:R:Y58 7.3525404
7R:R:D67 4.4825457
8R:R:Y69 14.786517
9R:R:I80 5.17333667
10R:R:L84 7.8675408
11R:R:Y111 12.185435
12R:R:F115 6.0475407
13R:R:F120 13.7483618
14R:R:L124 7.546519
15R:R:R128 5.29419
16R:R:V131 3.9525418
17R:R:I132 5.96408
18R:R:N143 2.1475406
19R:R:N197 7.12476
20R:R:L231 3.7075406
21R:R:V237 2.33408
22R:R:F241 6.115409
23R:R:W245 4.605409
24R:R:N249 6.7225409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F30 R:R:Y27 50.76396.19YesYes425
2R:R:L88 R:R:Y27 34.08062.34NoYes075
3R:R:F30 R:R:Y277 59.454212.38YesNo025
4R:R:E31 R:R:L88 31.99389.28NoNo047
5R:R:E31 R:R:K92 31.83335.4NoNo044
6R:R:I42 R:R:V43 11.59643.07NoYes046
7R:R:L47 R:R:V43 10.81042.98YesYes276
8R:R:L47 R:R:P291 15.122314.78YesNo079
9R:R:N290 R:R:P291 22.62261.63NoNo099
10R:R:N290 R:R:R286 18.349410.85NoNo099
11R:R:F244 R:R:R286 29.75216.03NoNo089
12R:R:F244 R:R:L282 44.43713.65NoNo087
13R:R:L282 R:R:V278 40.48492.98NoNo075
14R:R:V278 R:R:Y277 61.67945.05NoNo055
15R:R:G44 R:R:N48 17.14271.7NoNo099
16R:R:L78 R:R:N48 25.417910.98NoNo089
17R:R:L78 R:R:V82 24.23894.47NoNo085
18R:R:G83 R:R:V82 23.05993.68NoNo075
19R:R:C109 R:R:G83 21.90861.96NoNo047
20R:R:C109 R:R:I80 18.03391.64NoYes047
21R:R:I80 R:R:L84 13.50055.71YesYes078
22R:R:D77 R:R:N290 12.88614.04NoNo099
23R:R:G279 R:R:V278 24.00643.68NoNo075
24R:R:F248 R:R:G279 24.89214.52NoNo077
25R:R:F248 R:R:W245 26.33124.01NoYes079
26R:R:F241 R:R:W245 59.00036.01YesYes099
27R:R:F241 R:R:L121 72.0584.87YesNo098
28R:R:F120 R:R:L121 69.73879.74YesNo188
29R:R:F120 R:R:L124 98.95384.87YesYes189
30R:R:L124 R:R:R128 1003.64YesYes199
31R:R:D127 R:R:R128 38.80778.34NoYes189
32R:R:D127 R:R:P65 45.02931.61NoNo087
33R:R:P65 R:R:S64 26.22051.78NoNo077
34R:R:D67 R:R:S64 22.8444.42YesNo077
35R:R:D67 R:R:I55 10.49495.6YesNo077
36R:R:I52 R:R:L56 10.73844.28NoNo074
37R:R:F244 R:R:W245 27.98075.01NoYes089
38R:R:F241 R:R:R286 25.489910.69YesNo099
39R:R:P291 R:R:V51 13.8163.53NoNo099
40R:R:M301 R:R:V51 15.21094.56NoNo099
41R:R:M301 R:R:T54 33.38326.02NoYes097
42R:R:D304 R:R:T54 20.76282.89NoYes057
43R:R:D304 R:R:Y58 15.637118.39NoYes054
44R:R:N143 R:R:P65 19.20743.26YesNo067
45R:R:S66 R:R:Y69 11.10935.09NoYes187
46R:R:F120 R:R:I70 13.71087.54YesNo188
47R:R:I70 R:R:Y294 29.40883.63NoNo089
48R:R:M301 R:R:Y294 27.73174.79NoNo099
49R:R:D77 R:R:L73 34.20245.43NoNo099
50R:R:E89 R:R:K92 29.20961.35NoNo054
51R:R:E89 R:R:F86 15.92499.33NoNo057
52R:R:F86 R:R:F87 13.23481.07NoNo076
53R:R:F87 R:R:G105 10.53363.01NoNo064
54R:R:E89 R:R:Y90 10.915.61NoNo055
55R:R:R128 R:R:V131 70.74066.54YesYes198
56R:R:I132 R:R:V131 75.93821.54YesYes088
57R:R:I132 R:R:M215 62.97474.37YesNo088
58R:R:M215 R:R:T211 35.36483.01NoNo088
59R:R:T211 R:R:Y210 33.81499.99NoNo084
60R:R:L207 R:R:Y210 32.58617.03NoNo064
61R:R:I122 R:R:L207 29.35358.56NoNo086
62R:R:I122 R:R:V118 26.02133.07NoNo088
63R:R:L114 R:R:V118 24.33852.98NoNo088
64R:R:F115 R:R:L114 22.64476.09YesNo078
65R:R:F115 R:R:Y111 10.36754.13YesYes075
66R:R:L124 R:R:L234 19.26272.77YesNo097
67R:R:F218 R:R:I132 11.297511.3NoYes058
68R:R:N249 R:R:W245 30.3833.39YesYes099
69R:R:N197 R:R:N249 25.50096.81YesYes069
70R:R:F253 R:R:N197 15.714614.5NoYes766
71R:R:L231 R:R:M215 31.1587.07YesNo068
72R:R:L231 R:R:Y212 26.3812.34YesNo069
73R:R:L235 R:R:Y212 23.015614.07NoNo049
74R:R:L235 R:R:V239 19.60042.98NoNo045
75R:R:V238 R:R:V239 16.13531.6NoNo085
76R:R:M208 R:R:V238 14.386112.17NoNo088
77R:R:A242 R:R:M208 10.85463.22NoNo068
78R:R:L234 R:R:V237 17.85671.49NoYes078
79R:R:V233 R:R:V237 13.19051.6NoYes088
80R:R:V233 R:R:V297 11.55218.02NoNo087
81R:R:F253 R:R:L254 13.77733.65NoNo065
82R:R:G44 R:R:L47 10.50041.71NoYes097
83R:R:D77 R:R:N48 32.34812.69NoNo099
84R:R:F120 R:R:L73 32.359128.01YesNo189
85R:R:I70 R:R:Y69 17.88449.67NoYes187
86R:R:R128 R:R:S66 10.35652.64YesNo198
87R:R:L124 R:R:Y69 11.568723.45YesYes197
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 7RKY_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 1.61
Number of Linked Nodes 231
Number of Links 249
Number of Hubs 24
Number of Links mediated by Hubs 91
Number of Communities 7
Number of Nodes involved in Communities 30
Number of Links involved in Communities 37
Path Summary
Number Of Nodes in MetaPath 88
Number Of Links MetaPath 87
Number of Shortest Paths 39224
Length Of Smallest Path 3
Average Path Length 14.8332
Length of Longest Path 35
Minimum Path Strength 1.305
Average Path Strength 5.81401
Maximum Path Strength 28.96
Minimum Path Correlation 0.7
Average Path Correlation 0.920288
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 37.9832
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 34.0662
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • synapse   • cell junction   • G protein-coupled chemoattractant receptor activity   • C-C chemokine receptor activity   • molecular transducer activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • C-C chemokine binding   • chemokine binding   • cytokine binding   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • cell chemotaxis   • chemotaxis   • response to external stimulus   • taxis   • cell migration   • cell motility   • locomotion   • intracellular signal transduction   • calcium-mediated signaling   • intracellular signaling cassette   • immune response   • immune system process   • virion component   • host cell plasma membrane   • host cellular component   • host cell part   • host cell membrane   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium
SCOP2Domain Identifier• Galpha insert domain-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Galpha insert domain-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP09703
Sequence
>7RKY_nogp_Chain_R
EIYQLFEYT RLGVWLMCI VGTFLNVLV ITTILYYRR KKKSPSDTY 
ICNLAVADL LIVVGLPFF LEYAKHHPS REVVCSGLN ACFYICLFA 
GVCFLINLS MDRYCVIVW GVELNRVRN NKRATCWVV IFWILAVLM 
GMPHYVFLN TKVNICGYL APIALMAYT YNRMVRFII NYVGKWHMQ 
TLHVLLVVV VSFASFWFP FNLALFLES IDTLQNVII FCLYVGQFL 
AYVRACLNP GIYILVGTQ MRKDMWTTL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7RKYAOtherUnclassifiedUS27Human betaherpesvirus 5-GDPGi1/β1/γ23.82022-01-26doi.org/10.1126/sciadv.abl5442
7RKY (No Gprot) AOtherUnclassifiedUS27Human betaherpesvirus 5-GDP3.82022-01-26doi.org/10.1126/sciadv.abl5442
7RKXAOtherUnclassifiedUS27Human betaherpesvirus 5--Gi1/β1/γ23.12022-01-2610.1126/sciadv.abl5442
7RKX (No Gprot) AOtherUnclassifiedUS27Human betaherpesvirus 5--3.12022-01-2610.1126/sciadv.abl5442




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