Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 12.0437810
2L:L:L2 4.512510
3L:L:F3 6.6325410
4L:L:I5 6.84400
5R:R:F33 5.6407
6R:R:Y64 5.25333618
7R:R:F72 4.676507
8R:R:F74 8.91333617
9R:R:F80 9.1525416
10R:R:K85 7.645425
11R:R:M87 4.9025414
12R:R:H90 6.6125414
13R:R:W91 8.81333619
14R:R:F93 11.32417
15R:R:V101 6.655415
16R:R:F102 6.578516
17R:R:V105 5.05416
18R:R:D106 6.956515
19R:R:L109 7.55418
20R:R:V113 4.41418
21R:R:I116 5.8925418
22R:R:I119 5.06419
23R:R:R123 6.195419
24R:R:R137 9.805406
25R:R:V160 4.47414
26R:R:F178 9.144504
27R:R:F180 9.294505
28R:R:V195 2.8575404
29R:R:R201 7.88415
30R:R:R205 10.065616
31R:R:F210 8.4575418
32R:R:P213 3.3409
33R:R:Y221 5.90333618
34R:R:R238 2.9525407
35R:R:F250 5.956519
36R:R:W254 6.01719
37R:R:S255 5.5875406
38R:R:Y257 4.96717
39R:R:Q258 7.42518
40R:R:I279 4.4975405
41R:R:F291 7.536517
42R:R:F292 4.2175445
43R:R:N293 7.624519
44R:R:N297 6.52419
45R:R:L300 3.27408
46R:R:Y301 5.466519
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:D106 20.585117.23YesYes105
2L:L:L2 R:R:D106 17.9844.07YesYes105
3L:L:?1 R:R:R201 21.610213.22YesYes105
4R:R:F178 R:R:R201 16.79929.62YesYes045
5L:L:I4 R:R:F178 11.48638.79NoYes004
6R:R:F74 R:R:L109 20.361812.18YesYes178
7R:R:F74 R:R:V105 18.20573.93YesYes176
8L:L:?1 R:R:R205 30.77924.23YesYes106
9L:L:F3 R:R:R205 37.75598.55YesYes106
10L:L:?1 R:R:Y257 32.52776.38YesYes107
11L:L:F3 R:R:Y257 54.18195.16YesYes107
12L:L:F3 L:L:I5 67.829210.05YesYes000
13L:L:I4 R:R:F102 16.737310.05NoYes006
14R:R:F102 R:R:V105 24.15743.93YesYes166
15R:R:F178 R:R:F180 15.920813.93YesYes045
16R:R:F180 R:R:L198 12.80964.87YesNo054
17L:L:I5 R:R:L198 27.73638.56YesNo004
18L:L:I5 R:R:L272 25.72855.71YesNo001
19R:R:F291 R:R:F33 14.78495.36YesYes077
20R:R:F33 R:R:T29 10.20863.89YesNo075
21L:L:?1 R:R:W254 39.65784.13YesYes109
22R:R:N293 R:R:W254 27.02259.04YesYes199
23R:R:L296 R:R:N293 18.57564.12NoYes069
24R:R:N293 R:R:N297 10.884912.26YesYes199
25L:L:?1 R:R:V113 31.90524.05YesYes108
26R:R:F250 R:R:V113 29.47033.93YesYes198
27R:R:F250 R:R:I116 1008.79YesYes198
28R:R:I116 R:R:Y301 99.91534.84YesYes189
29R:R:Y301 R:R:Y64 36.03985.96YesYes198
30R:R:V302 R:R:Y64 16.66725.05NoYes078
31R:R:F303 R:R:V302 14.24056.55NoNo077
32R:R:F303 R:R:L46 11.88236.09NoNo077
33R:R:F250 R:R:W254 68.83156.01YesYes199
34R:R:T60 R:R:Y64 18.30356.24NoYes078
35R:R:R137 R:R:T60 17.19693.88YesNo067
36R:R:R137 R:R:V59 12.967713.08YesNo067
37R:R:A142 R:R:V59 11.86775.09NoNo077
38R:R:A142 R:R:I62 10.77743.25NoNo076
39R:R:R123 R:R:Y301 31.08384.12YesYes199
40R:R:D106 R:R:V160 13.20244.38YesYes154
41R:R:T103 R:R:V160 22.91883.17NoYes064
42R:R:I161 R:R:T103 21.33317.6NoNo056
43R:R:I161 R:R:L158 18.16822.85NoNo054
44R:R:L154 R:R:L158 16.5891.38NoNo034
45R:R:L154 R:R:L155 15.03911.38NoNo033
46R:R:L155 R:R:V151 13.49411.49NoNo034
47R:R:G148 R:R:V151 10.83441.84NoNo024
48R:R:F102 R:R:V101 43.21873.93YesYes165
49R:R:F80 R:R:V101 19.890811.8YesYes165
50R:R:V101 R:R:W91 22.17576.13YesYes159
51R:R:F80 R:R:F93 17.57513.93YesYes167
52R:R:F93 R:R:W91 17.654817.04YesYes179
53R:R:F93 R:R:P92 32.92215.78YesNo172
54R:R:H90 R:R:P92 23.53166.1YesNo142
55R:R:H90 R:R:V174 11.83028.3YesNo045
56R:R:R123 R:R:Y221 33.37529.26YesYes198
57R:R:A120 R:R:Y221 39.30745.34NoYes098
58R:R:V246 R:R:Y301 33.75497.57NoYes089
59R:R:V246 R:R:Y221 31.24196.31NoYes088
60R:R:A120 R:R:S220 34.99193.42NoNo098
61R:R:C124 R:R:S220 32.82925.16NoNo088
62R:R:C124 R:R:L128 28.49413.17NoNo088
63R:R:K227 R:R:L128 19.78164.23NoNo058
64R:R:K227 R:R:P130 17.59781.67NoNo058
65R:R:H129 R:R:P130 15.41073.05NoNo078
66R:R:H129 R:R:W132 11.02357.41NoNo074
67L:L:I5 R:R:T177 16.47983.04YesNo004
68R:R:T177 R:R:V167 14.57794.76NoNo041
69R:R:N179 R:R:V167 10.42864.43NoNo041
70R:R:I268 R:R:L198 33.33775.71NoNo034
71R:R:I268 R:R:V195 52.90093.07NoYes034
72R:R:R269 R:R:V195 24.48345.23NoYes014
73R:R:N192 R:R:R269 20.41073.62NoNo031
74R:R:E189 R:R:N192 16.33476.57NoNo043
75R:R:I268 R:R:L272 23.86417.14NoNo031
76R:R:I191 R:R:V195 16.33471.54NoYes024
77R:R:Q258 R:R:R205 13.61479.35YesYes186
78R:R:Q258 R:R:W254 27.15783.29YesYes189
79R:R:Q258 R:R:Y257 14.19653.38YesYes187
80R:R:L243 R:R:Y221 17.60768.21NoYes178
81R:R:A225 R:R:L243 15.56231.58NoNo057
82R:R:A225 R:R:L240 11.24021.58NoNo056
83R:R:A249 R:R:L296 13.81361.58NoNo076
84R:R:A249 R:R:L300 13.18291.58NoYes078
85R:R:L300 R:R:M304 10.29992.83YesNo087
86R:R:A290 R:R:W254 13.00527.78NoYes089
87R:R:A290 R:R:Y257 12.77544NoYes087
88L:L:F3 R:R:A264 23.75332.77YesNo004
89R:R:A264 R:R:I279 20.79533.25NoYes045
90R:R:I279 R:R:Y276 11.90196.04YesNo051
91L:L:L2 R:R:F291 10.87353.65YesYes107
92R:R:L109 R:R:W254 20.26895.69YesYes189
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D106 17.23 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L109 5.02 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F110 22.09 1 Yes No 0 7 0 1
L:L:?1 R:R:V113 4.05 1 Yes Yes 0 8 0 1
L:L:?1 R:R:R201 13.22 1 Yes Yes 0 5 0 1
L:L:?1 R:R:R205 24.23 1 Yes Yes 0 6 0 1
L:L:?1 R:R:W254 4.13 1 Yes Yes 0 9 0 1
L:L:?1 R:R:Y257 6.38 1 Yes Yes 0 7 0 1
L:L:L2 R:R:F81 6.09 1 Yes No 0 6 0 1
L:L:L2 R:R:V105 4.47 1 Yes Yes 0 6 0 1
L:L:L2 R:R:D106 4.07 1 Yes Yes 0 5 0 1
L:L:L2 R:R:F291 3.65 1 Yes Yes 0 7 0 1
L:L:F3 R:R:R205 8.55 1 Yes Yes 0 6 0 1
L:L:F3 R:R:Y257 5.16 1 Yes Yes 0 7 0 1
L:L:I4 R:R:F102 10.05 0 No Yes 0 6 0 1
L:L:I4 R:R:F178 8.79 0 No Yes 0 4 0 1
L:L:I5 R:R:L198 8.56 0 Yes No 0 4 0 1
L:L:I5 R:R:L272 5.71 0 Yes No 0 1 0 1
R:R:F291 R:R:F33 5.36 1 Yes Yes 7 7 1 2
R:R:F74 R:R:V105 3.93 1 Yes Yes 7 6 2 1
R:R:F74 R:R:L109 12.18 1 Yes Yes 7 8 2 1
R:R:F291 R:R:F74 16.08 1 Yes Yes 7 7 1 2
R:R:F102 R:R:F81 6.43 1 Yes No 6 6 1 1
R:R:F81 R:R:V105 7.87 1 No Yes 6 6 1 1
R:R:F102 R:R:R84 8.55 1 Yes No 6 5 1 2
R:R:F102 R:R:V101 3.93 1 Yes Yes 6 5 1 2
R:R:F102 R:R:V105 3.93 1 Yes Yes 6 6 1 1
R:R:D106 R:R:T157 4.34 1 Yes No 5 7 1 2
R:R:D106 R:R:V160 4.38 1 Yes Yes 5 4 1 2
R:R:D106 R:R:R201 4.76 1 Yes Yes 5 5 1 1
R:R:L109 R:R:W254 5.69 1 Yes Yes 8 9 1 1
R:R:F291 R:R:L109 7.31 1 Yes Yes 7 8 1 1
R:R:F110 R:R:F114 7.5 0 No No 7 6 1 2
R:R:F110 R:R:L156 7.31 0 No No 7 5 1 2
R:R:P213 R:R:V113 3.53 0 Yes Yes 9 8 2 1
R:R:F250 R:R:V113 3.93 1 Yes Yes 9 8 2 1
R:R:V113 R:R:W254 6.13 1 Yes Yes 8 9 1 1
R:R:V160 R:R:V164 6.41 1 Yes No 4 5 2 2
R:R:R201 R:R:V160 3.92 1 Yes Yes 5 4 1 2
R:R:F178 R:R:V164 10.49 0 Yes No 4 5 1 2
R:R:T177 R:R:V167 4.76 0 No No 4 1 1 2
R:R:F178 R:R:F180 13.93 0 Yes Yes 4 5 1 2
R:R:F178 R:R:R201 9.62 0 Yes Yes 4 5 1 1
R:R:F180 R:R:L198 4.87 0 Yes No 5 4 2 1
R:R:I268 R:R:L198 5.71 0 No No 3 4 2 1
R:R:G202 R:R:R205 4.5 0 No Yes 5 6 2 1
R:R:R205 R:R:Y257 8.23 1 Yes Yes 6 7 1 1
R:R:Q258 R:R:R205 9.35 1 Yes Yes 8 6 2 1
R:R:A261 R:R:R205 5.53 0 No Yes 6 6 2 1
R:R:F250 R:R:W254 6.01 1 Yes Yes 9 9 2 1
R:R:F250 R:R:N293 4.83 1 Yes Yes 9 9 2 2
R:R:Q258 R:R:W254 3.29 1 Yes Yes 8 9 2 1
R:R:A290 R:R:W254 7.78 0 No Yes 8 9 2 1
R:R:N293 R:R:W254 9.04 1 Yes Yes 9 9 2 1
R:R:Q258 R:R:Y257 3.38 1 Yes Yes 8 7 2 1
R:R:T286 R:R:Y257 3.75 0 No Yes 7 7 2 1
R:R:S287 R:R:Y257 3.82 0 No Yes 6 7 2 1
R:R:A290 R:R:Y257 4 0 No Yes 8 7 2 1
R:R:A264 R:R:I279 3.25 0 No Yes 4 5 1 2
R:R:I268 R:R:L272 7.14 0 No No 3 1 2 1
R:R:F291 R:R:S287 5.28 1 Yes No 7 6 1 2
L:L:I5 R:R:T177 3.04 0 Yes No 0 4 0 1
R:R:F178 R:R:P159 2.89 0 Yes No 4 8 1 2
L:L:F3 R:R:A264 2.77 1 Yes No 0 4 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7T6T_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.25
Number of Linked Nodes 281
Number of Links 329
Number of Hubs 46
Number of Links mediated by Hubs 160
Number of Communities 6
Number of Nodes involved in Communities 59
Number of Links involved in Communities 86
Path Summary
Number Of Nodes in MetaPath 93
Number Of Links MetaPath 92
Number of Shortest Paths 132917
Length Of Smallest Path 3
Average Path Length 14.3255
Length of Longest Path 30
Minimum Path Strength 1.195
Average Path Strength 6.1517
Maximum Path Strength 23.16
Minimum Path Correlation 0.7
Average Path Correlation 0.925884
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.55556
Average % Of Corr. Nodes 44.0181
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 54.2704
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • cytoskeletal protein binding   • spectrin binding   • protein-containing complex binding   • protein binding   • binding   • enzyme binding   • GTPase binding   • phosphoric ester hydrolase activity   • alkylglycerophosphoethanolamine phosphodiesterase activity   • hydrolase activity, acting on ester bonds   • phosphoric diester hydrolase activity   • hydrolase activity   • catalytic activity   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity, acting on acid anhydrides   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • response to decreased oxygen levels   • cellular response to stimulus   • response to stimulus   • cellular response to oxygen levels   • cellular response to hypoxia   • cellular response to decreased oxygen levels   • cellular response to chemical stimulus   • cellular response to stress   • response to hypoxia   • response to stress   • response to chemical   • response to oxygen levels   • response to abiotic stimulus   • cellular process   • cell population proliferation   • regulation of biological process   • regulation of cellular process   • signaling   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cell communication   • G protein-coupled receptor signaling pathway   • signal transduction   • muscle cell apoptotic process   • striated muscle cell apoptotic process   • apoptotic process   • cell death   • programmed cell death   • cardiac muscle cell apoptotic process   • photoreceptor inner segment   • somatodendritic compartment   • dendrite   • dendritic tree   • neuron projection   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor outer segment   • photoreceptor cell cilium   • ciliary membrane   • photoreceptor outer segment membrane   • plasma membrane region   • cell projection membrane   • synapse   • cell junction   • cell body   • G-protein beta-subunit binding   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • RAGE receptor binding   • signaling receptor binding   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • complement receptor activity   • immune receptor activity   • scavenger receptor binding   • peptide receptor activity   • N-formyl peptide receptor activity   • G protein-coupled peptide receptor activity   • G protein-coupled receptor binding   • chemotaxis   • taxis   • response to external stimulus   • locomotion   • nitric oxide mediated signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • immune response-regulating cell surface receptor signaling pathway   • complement receptor mediated signaling pathway   • positive regulation of biological process   • positive regulation of response to stimulus   • immune response-activating signaling pathway   • immune response-regulating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • cell surface receptor signaling pathway   • immune response-activating cell surface receptor signaling pathway   • immune response   • regulation of response to stimulus   • immune system process   • regulation of immune response   • activation of immune response   • defense response   • inflammatory response   • intracellular vesicle   • cytoplasmic vesicle membrane   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • secretory granule membrane   • azurophil granule   • primary lysosome   • azurophil granule membrane   • ficolin-1-rich granule membrane   • ficolin-1-rich granule   • tertiary granule
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeFME
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeFME
NameN-Formylmethionine
Synonyms
  • N-Formylmethionine
  • Formyl-methionine
  • (2S)-2-(formylamino)-4-(methylthio)butanoic acid
  • L-N-Formylmethionine
  • N-formyl-L-methionine
Identifier
FormulaC6 H11 N O3 S
Molecular Weight177.221
SMILES
PubChem439750
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21462
Sequence
>7T6T_nogp_Chain_R
GYLFLDIIT YLVFAVTFV LGVLGNGLV IWVAGFRMT HTVTTISYL 
NLAVADFCF TSTLPFFMV RKAMGGHWP FGWFLCKFV FTIVDINLF 
GSVFLIALI ALDRCVCVL HPVWTQNHR TVSLAKKVI IGPWVMALL 
LTLPVIIRV TTVPGKTGT VACTFNFSP WTNDPKERI NVAVAMLTV 
RGIIRFIIG FSAPMSIVA VSYGLIATK IHKQGLIKS SRPLRVLSF 
VAAAFFLCW SPYQVVALI ATVRIRELL QGMYKEIGI AVDVTSALA 
FFNSCLNPM LYVFMGQDF RERLIHAL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7VFXAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ22.82022-09-2110.1038/s41467-022-32822-y
7VFX (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-2.82022-09-2110.1038/s41467-022-32822-y
7EUOAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ22.92022-05-2510.1038/s41467-022-32822-y
7EUO (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-2.92022-05-2510.1038/s41467-022-32822-y
7WVUAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ23.32022-04-1310.1038/s41467-022-29361-x
7WVU (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-3.32022-04-1310.1038/s41467-022-29361-x
7T6TAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLFII-Gi1/β1/γ23.22022-03-3010.1038/s41467-022-28586-0
7T6T (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLFII-3.22022-03-3010.1038/s41467-022-28586-0




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7T6T_nogp.zip



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