Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F33 4.1175407
2R:R:F37 4.6725407
3R:R:W49 5.085404
4R:R:Y64 4.32528
5R:R:L67 4.9775429
6R:R:D71 6.402529
7R:R:F74 6.395607
8R:R:W91 10.19519
9R:R:F93 8.77617
10R:R:F102 4.95416
11R:R:I107 3.3925405
12R:R:N108 3.5408
13R:R:F110 8.6425417
14R:R:F114 3.47506
15R:R:I116 5.88428
16R:R:R123 4.5975429
17R:R:C124 4.125408
18R:R:R137 7.3275436
19R:R:P149 3.38407
20R:R:T157 5.245407
21R:R:C176 6.65419
22R:R:F178 8.7675414
23R:R:F180 9.24405
24R:R:W183 6.0775441
25R:R:R201 7.9275415
26R:R:R205 6.962516
27R:R:F210 7.8025408
28R:R:Y221 6.654508
29R:R:R238 2.956507
30R:R:W254 7.15409
31R:R:Y257 5.525407
32R:R:I281 4.8875402
33R:R:N297 7529
34R:R:Y301 4.678529
35R:R:V302 4.8425427
36R:R:F303 3.9775427
37L:L:?1 9.62286710
38L:L:L4 3.9175410
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:I281 R:R:L25 10.18912.85YesNo022
2R:R:L25 R:R:V285 11.62924.47NoNo026
3R:R:D284 R:R:I281 10.229511.2NoYes052
4R:R:D284 R:R:V285 14.40712.92NoNo056
5R:R:T29 R:R:V285 27.43334.76NoNo056
6R:R:F33 R:R:T29 31.60825.19YesNo075
7R:R:F291 R:R:F33 37.09922.14NoYes077
8R:R:F291 R:R:F74 38.070111.79NoYes077
9R:R:F37 R:R:V41 15.95782.62YesNo076
10R:R:F37 R:R:L78 11.66976.09YesNo078
11R:R:L78 R:R:T36 10.22952.95NoNo087
12R:R:F72 R:R:V41 12.63793.93NoNo076
13R:R:D71 R:R:S294 1005.89YesNo098
14R:R:F74 R:R:S294 99.45526.61YesNo078
15R:R:D71 R:R:N44 20.55348.08YesNo099
16R:R:V302 R:R:Y64 44.71263.79YesYes278
17R:R:R123 R:R:Y64 63.32974.12YesYes298
18R:R:R123 R:R:Y301 97.97464.12YesYes299
19R:R:L67 R:R:Y301 53.16494.69YesYes299
20R:R:D71 R:R:L67 57.38834.07YesYes299
21R:R:N297 R:R:Y301 63.07613.49YesYes299
22R:R:D71 R:R:N297 60.88898.08YesYes299
23R:R:F308 R:R:V302 13.73016.55NoYes097
24R:R:F308 R:R:M55 12.48156.22NoNo095
25R:R:T60 R:R:Y64 20.11116.24NoYes078
26R:R:R137 R:R:T60 16.40551.29YesNo067
27R:R:F74 R:R:L109 37.1728.53YesNo078
28L:L:?1 R:R:L109 36.40875.02YesNo008
29L:L:?1 R:R:F110 21.912712.15YesYes107
30R:R:F110 R:R:F114 30.46474.29YesYes076
31R:R:F114 R:R:P149 23.30162.89YesYes067
32R:R:L115 R:R:P149 11.88544.93NoYes087
33R:R:L115 R:R:N66 10.41834.12NoNo089
34R:R:F291 R:R:S287 10.79053.96NoNo076
35R:R:S287 R:R:Y257 10.02726.36NoYes067
36L:L:?1 R:R:Y257 12.09044.25YesYes007
37R:R:F74 R:R:N108 29.16213.62YesYes078
38R:R:F74 R:R:V105 29.00563.93YesNo076
39R:R:T77 R:R:V105 26.84543.17NoNo076
40R:R:T77 R:R:V101 24.77413.17NoNo075
41R:R:F80 R:R:V101 21.24653.93NoNo065
42R:R:F80 R:R:F93 16.09278.57NoYes167
43R:R:F93 R:R:P92 14.7911.56YesNo072
44R:R:H90 R:R:P92 11.22474.58NoNo042
45R:R:I107 R:R:N108 24.30762.83YesYes058
46R:R:I107 R:R:T103 21.12793.04YesNo056
47R:R:I161 R:R:T103 22.7119.12NoNo056
48R:R:I161 R:R:K99 21.28162.91NoNo057
49R:R:K99 R:R:W95 19.873810.44NoNo073
50R:R:T165 R:R:W95 18.50647.28NoNo043
51L:L:L4 R:R:F102 13.09646.09YesYes106
52L:L:L4 R:R:F178 12.30623.65YesYes104
53R:R:F178 R:R:R201 22.853910.69YesYes145
54L:L:?1 R:R:R201 24.763312.12YesYes105
55R:R:F114 R:R:V113 21.0553.93YesNo068
56R:R:N293 R:R:N297 13.689710.9NoYes099
57R:R:N293 R:R:W254 12.891411.3NoYes099
58R:R:F250 R:R:I116 28.19127.54NoYes098
59R:R:I216 R:R:S220 11.58071.55NoNo068
60R:R:A120 R:R:S220 31.24953.42NoNo098
61R:R:A120 R:R:Y221 35.65634NoYes098
62R:R:R123 R:R:Y221 39.2545.14YesYes098
63R:R:V246 R:R:Y221 36.27395.05NoYes088
64R:R:V246 R:R:Y301 38.96555.05NoYes089
65R:R:C126 R:R:R137 11.5246.96NoYes386
66R:R:C124 R:R:S220 18.17476.89YesNo088
67R:R:C124 R:R:I224 17.84033.27YesNo088
68R:R:I224 R:R:L243 33.12122.85NoNo087
69R:R:L243 R:R:Y221 35.189716.41NoYes078
70R:R:C124 R:R:L128 22.55723.17YesNo088
71R:R:I224 R:R:V127 13.22049.22NoNo088
72R:R:L128 R:R:V127 11.12762.98NoNo088
73R:R:C126 R:R:T133 10.31043.38NoNo085
74R:R:K227 R:R:L128 26.94525.64NoNo058
75R:R:F178 R:R:F180 11.750612.86YesYes045
76R:R:N179 R:R:T165 17.16874.39NoNo044
77R:R:N179 R:R:P182 14.50693.26NoNo044
78R:R:P182 R:R:W183 13.04245.4NoYes041
79R:R:F114 R:R:I208 17.02042.51YesNo065
80R:R:I207 R:R:I208 14.3454.42NoNo055
81R:R:F206 R:R:I207 14.17512.51NoNo065
82R:R:F206 R:R:L262 22.34428.53NoNo066
83R:R:L262 R:R:V266 21.1442.98NoNo065
84R:R:R267 R:R:V266 19.93852.62NoNo045
85R:R:R267 R:R:Y276 18.72766.17NoNo041
86R:R:E270 R:R:Y276 15.06242.24NoNo011
87L:L:?1 R:R:R205 11.184217.63YesYes106
88R:R:F250 R:R:M214 18.73573.73NoNo096
89R:R:F210 R:R:M214 12.95074.98YesNo086
90R:R:K227 R:R:Q231 20.31612.71NoNo055
91R:R:F303 R:R:V302 21.90462.62YesYes277
92R:R:F303 R:R:R309 19.08362.14YesNo078
93R:R:Q306 R:R:R309 16.72111.17NoNo058
94R:R:Q306 R:R:R238 15.5561.17NoYes057
95R:R:F72 R:R:N44 13.85154.83NoNo079
96R:R:V113 R:R:W254 21.21424.9NoYes089
97R:R:F206 R:R:F210 12.7973.22NoYes068
98R:R:I116 R:R:Y301 20.52916.04YesYes289
99R:R:F250 R:R:W254 10.58018.02NoYes099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:F74 R:R:L109 8.53 0 Yes No 7 8 2 1
R:R:C98 R:R:F102 5.59 1 No Yes 9 6 2 1
R:R:C176 R:R:C98 7.28 1 Yes No 9 9 2 2
R:R:F102 R:R:V101 3.93 1 Yes No 6 5 1 2
R:R:C176 R:R:F102 4.19 1 Yes Yes 9 6 2 1
L:L:L4 R:R:F102 6.09 1 Yes Yes 0 6 0 1
R:R:D106 R:R:F110 7.17 1 No Yes 5 7 1 1
R:R:D106 R:R:T157 8.67 1 No Yes 5 7 1 2
L:L:?1 R:R:D106 12.31 1 Yes No 0 5 0 1
L:L:?1 R:R:L109 5.02 1 Yes No 0 8 0 1
R:R:F110 R:R:F114 4.29 1 Yes Yes 7 6 1 2
R:R:F110 R:R:L156 10.96 1 Yes No 7 5 1 2
L:L:?1 R:R:F110 12.15 1 Yes Yes 0 7 0 1
R:R:T157 R:R:V160 4.76 0 Yes No 7 4 2 2
R:R:V160 R:R:V164 4.81 0 No No 4 5 2 1
R:R:F178 R:R:V164 7.87 1 Yes No 4 5 1 1
L:L:L4 R:R:V164 2.98 1 Yes No 0 5 0 1
L:L:L4 R:R:T177 2.95 1 Yes No 0 4 0 1
R:R:F178 R:R:F180 12.86 1 Yes Yes 4 5 1 2
R:R:F178 R:R:R201 10.69 1 Yes Yes 4 5 1 1
L:L:L4 R:R:F178 3.65 1 Yes Yes 0 4 0 1
R:R:R201 R:R:R205 7.46 1 Yes Yes 5 6 1 1
L:L:?1 R:R:R201 12.12 1 Yes Yes 0 5 0 1
R:R:G202 R:R:R205 3 0 No Yes 5 6 2 1
L:L:?1 R:R:R205 17.63 1 Yes Yes 0 6 0 1
L:L:F3 R:R:R205 5.34 0 No Yes 0 6 0 1
R:R:T286 R:R:Y257 7.49 0 No Yes 7 7 2 1
R:R:S287 R:R:Y257 6.36 0 No Yes 6 7 2 1
R:R:A290 R:R:Y257 4 0 No Yes 8 7 2 1
L:L:?1 R:R:Y257 4.25 1 Yes Yes 0 7 0 1
L:L:F3 R:R:A264 2.77 0 No No 0 4 0 1
L:L:F3 R:R:V283 3.93 0 No No 0 5 0 1
R:R:G280 R:R:V283 1.84 0 No No 4 5 2 1
R:R:P159 R:R:R201 1.44 0 No Yes 8 5 2 1
R:R:A261 R:R:R205 1.38 0 No Yes 6 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7VFX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.71
Number of Linked Nodes 280
Number of Links 311
Number of Hubs 38
Number of Links mediated by Hubs 138
Number of Communities 4
Number of Nodes involved in Communities 32
Number of Links involved in Communities 43
Path Summary
Number Of Nodes in MetaPath 100
Number Of Links MetaPath 99
Number of Shortest Paths 84849
Length Of Smallest Path 3
Average Path Length 14.5166
Length of Longest Path 30
Minimum Path Strength 1.17
Average Path Strength 5.3524
Maximum Path Strength 16.4
Minimum Path Correlation 0.7
Average Path Correlation 0.9288
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.7037
Average % Of Corr. Nodes 46.1514
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.4505
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• RAGE receptor binding   • protein binding   • binding   • signaling receptor binding   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • complement receptor activity   • immune receptor activity   • scavenger receptor binding   • peptide receptor activity   • N-formyl peptide receptor activity   • G protein-coupled peptide receptor activity   • G protein-coupled receptor binding   • chemotaxis   • response to stimulus   • taxis   • response to chemical   • response to external stimulus   • locomotion   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • cellular response to stimulus   • nitric oxide mediated signal transduction   • regulation of biological process   • regulation of cellular process   • signaling
Gene OntologyBiological Process• chemotaxis   • response to stimulus   • taxis   • response to chemical   • response to external stimulus   • locomotion   • positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • cellular response to stimulus   • nitric oxide mediated signal transduction   • regulation of biological process   • regulation of cellular process   • signaling   • intracellular signal transduction   • cell communication   • intracellular signaling cassette   • cellular process   • signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • immune response-regulating cell surface receptor signaling pathway   • complement receptor mediated signaling pathway   • positive regulation of biological process   • positive regulation of response to stimulus   • immune response-activating signaling pathway   • immune response-regulating signaling pathway   • positive regulation of immune response   • regulation of immune system process   • positive regulation of immune system process   • cell surface receptor signaling pathway   • immune response-activating cell surface receptor signaling pathway   • immune response   • regulation of response to stimulus   • immune system process   • regulation of immune response   • activation of immune response   • defense response   • response to stress   • inflammatory response   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • membrane-bounded organelle   • intracellular anatomical structure   • membrane   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle membrane   • cellular anatomical structure   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • organelle   • secretory granule
Gene OntologyCellular Component• membrane-bounded organelle   • intracellular anatomical structure   • membrane   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle membrane   • cellular anatomical structure   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • organelle   • secretory granule   • secretory vesicle   • cytoplasm   • vesicle   • organelle membrane   • secretory granule membrane   • lytic vacuole   • lysosome   • vacuolar membrane   • azurophil granule   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • primary lysosome   • azurophil granule membrane   • ficolin-1-rich granule membrane   • ficolin-1-rich granule   • tertiary granule   • cell periphery   • plasma membrane   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • Golgi apparatus   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeFME
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeFME
NameN-Formylmethionine
Synonyms
  • Formyl-methionine
  • N-Formylmethionine
  • N-formyl-L-methionine
  • (2S)-2-(formylamino)-4-(methylthio)butanoic acid
  • L-N-Formylmethionine
Identifier
FormulaC6 H11 N O3 S
Molecular Weight177.221
SMILES
PubChem439750
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21462
Sequence
>7VFX_nogp_Chain_R
YLFLDIITY LVFAVTFVL GVLGNGLVI WVAGFRMTH TVTTISYLN 
LAVADFCFT STLPFFMVR KAMGGHWPF GWFLCKFVF TIVDINLFG 
SVFLIALIA LDRCVCVLH PVWTQNHRT VSLAKKVII GPWVMALLL 
TLPVIIRVT TVPGKTGTV ACTFNFSPW TNDPKERIN VAVAMLTVR 
GIIRFIIGF SAPMSIVAV SYGLIATKI HKQGLIKSS RPLRVLSFV 
AAAFFLCWS PYQVVALIA TVRIRELLQ GMYKEIGIA VDVTSALAF 
FNSCLNPML YVFMGQDFR ERLIHAL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7T6TAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLFII-Gi1/β1/γ23.22022-03-30doi.org/10.1038/s41467-022-28586-0
7T6T (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLFII-3.22022-03-30doi.org/10.1038/s41467-022-28586-0
7WVUAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ23.32022-04-13doi.org/10.1038/s41467-022-29361-x
7WVU (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-3.32022-04-13doi.org/10.1038/s41467-022-29361-x
7EUOAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ22.92022-05-25doi.org/10.1038/s41467-022-32822-y
7EUO (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-2.92022-05-25doi.org/10.1038/s41467-022-32822-y
7VFXAPeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-Gi1/β1/γ22.82022-09-21doi.org/10.1038/s41467-022-32822-y
7VFX (No Gprot) APeptideFormylpeptideFPR1-ALXHomo sapiensfMLF-2.82022-09-21doi.org/10.1038/s41467-022-32822-y




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Download 7VFX_nogp.zip



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