Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:T64 1.9025407
2R:R:F71 6.734538
3R:R:L78 3.9625468
4R:R:D86 8.22459
5R:R:V93 2.96333617
6R:R:M94 3.1375407
7R:R:W107 5.858518
8R:R:W117 7.71415
9R:R:D121 9.985418
10R:R:W130 5.5725406
11R:R:W141 5.585404
12R:R:R145 2.12405
13R:R:Y149 8.2025428
14R:R:R154 8.024528
15R:R:F209 6.665418
16R:R:Y210 4.224505
17R:R:Y220 4.0175409
18R:R:W298 5.778518
19R:R:F302 6.846516
20R:R:W325 5.24167616
21R:R:Y328 5.58667617
22R:R:F332 4.47406
23R:R:I337 3.2275408
24R:R:Y338 5.078579
25R:R:Y345 6.50833638
26L:L:?1 8.0041010
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:W325 R:R:Y328 25.70154.82YesYes167
2R:R:M94 R:R:Y328 12.37824.79YesYes077
3R:R:F332 R:R:W57 17.28326.01YesNo068
4R:R:L336 R:R:W57 20.12414.56NoNo068
5R:R:F341 R:R:L336 22.9077.31NoNo466
6R:R:F341 R:R:I337 28.57722.51NoYes068
7R:R:I337 R:R:L290 42.41072.85YesNo088
8R:R:L290 R:R:Y338 60.4368.21NoYes089
9R:R:M82 R:R:Y338 26.33353.59NoYes099
10R:R:M82 R:R:N334 27.38875.61NoNo099
11R:R:N330 R:R:N334 55.6478.17NoNo099
12R:R:N330 R:R:W298 58.16917.91NoYes098
13R:R:F302 R:R:W298 73.08095.01YesYes168
14L:L:?1 R:R:F302 1004.73YesYes106
15L:L:?1 R:R:D121 37.082622.11YesYes108
16R:R:D121 R:R:Y328 21.103910.34YesYes187
17R:R:V132 R:R:Y338 41.37873.79NoYes089
18R:R:N334 R:R:V132 27.43514.43NoNo098
19R:R:F294 R:R:V132 15.59023.93NoNo098
20R:R:F294 R:R:L213 16.56422.44NoNo095
21R:R:F209 R:R:L213 17.56152.44YesNo085
22R:R:F209 R:R:F302 21.834416.08YesYes186
23L:L:?1 R:R:L324 22.28084.3YesNo005
24R:R:L324 R:R:Y328 21.15614.69NoYes057
25R:R:D86 R:R:S128 35.01284.42YesNo099
26R:R:S128 R:R:S85 36.12594.89NoNo098
27R:R:A127 R:R:S85 37.22753.42NoNo088
28R:R:A127 R:R:W166 38.31756.48NoNo089
29R:R:T165 R:R:W166 47.32723.64NoNo069
30R:R:T165 R:R:W130 58.85323.64NoYes066
31R:R:P212 R:R:W130 84.27648.11NoYes096
32R:R:I129 R:R:P212 85.15773.39NoNo089
33R:R:I129 R:R:W298 85.58093.52NoYes088
34R:R:D86 R:R:P335 24.99423.22YesNo599
35R:R:F71 R:R:Y345 13.5038.25YesYes388
36R:R:T339 R:R:Y345 23.24339.99NoYes078
37R:R:P335 R:R:T339 24.47241.75NoNo097
38R:R:T133 R:R:W130 45.57054.85NoYes066
39R:R:T133 R:R:V215 43.43693.17NoNo066
40R:R:L137 R:R:V215 42.31222.98NoNo066
41R:R:L137 R:R:W141 41.21646.83NoYes064
42R:R:W141 R:R:Y149 21.41129.65YesYes048
43R:R:R154 R:R:Y149 10.818611.32YesYes288
44R:R:N131 R:R:T165 10.9815.85NoNo076
45R:R:I162 R:R:S81 18.1766.19NoNo089
46R:R:I162 R:R:L78 15.61344.28NoYes088
47R:R:S81 R:R:W166 11.26513.71NoNo099
48L:L:?1 R:R:W117 20.30969.72YesYes105
49R:R:W107 R:R:W117 14.83074.69YesYes185
50L:L:?1 R:R:V122 14.92358.09YesNo007
51R:R:S173 R:R:V122 13.4453.23NoNo087
52R:R:L290 R:R:Y220 16.75565.86NoYes089
53R:R:W141 R:R:Y140 14.81333.86YesNo048
54R:R:K222 R:R:Y140 10.88829.55NoNo058
55L:L:?1 R:R:S204 16.25124.66YesNo006
56R:R:S204 R:R:Y200 13.4456.36NoNo067
57R:R:F209 R:R:Y210 19.63134.13YesYes085
58R:R:L303 R:R:Y210 17.31223.52NoYes055
59R:R:I299 R:R:L303 15.6834.28NoNo065
60R:R:I299 R:R:P300 12.20433.39NoNo069
61R:R:F323 R:R:P300 10.44768.67NoNo059
62R:R:D121 R:R:V93 14.89454.38YesYes187
63R:R:F209 R:R:W298 10.76074.01YesYes188
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D121 R:R:V93 4.38 1 Yes Yes 8 7 1 2
R:R:V93 R:R:Y328 3.79 1 Yes Yes 7 7 2 2
R:R:L96 R:R:W117 7.97 0 No Yes 5 5 2 1
R:R:H100 R:R:W107 10.58 1 No Yes 5 8 2 2
R:R:H100 R:R:W117 8.46 1 No Yes 5 5 2 1
R:R:W107 R:R:W117 4.69 1 Yes Yes 8 5 2 1
L:L:?1 R:R:W117 9.72 1 Yes Yes 0 5 0 1
R:R:I118 R:R:V194 4.61 0 No No 6 4 2 1
R:R:C125 R:R:D121 3.11 1 No Yes 6 8 1 1
R:R:D121 R:R:Y328 10.34 1 Yes Yes 8 7 1 2
L:L:?1 R:R:D121 22.11 1 Yes Yes 0 8 0 1
R:R:S173 R:R:V122 3.23 0 No No 8 7 2 1
L:L:?1 R:R:V122 8.09 1 Yes No 0 7 0 1
L:L:?1 R:R:C125 7.39 1 Yes No 0 6 0 1
R:R:I172 R:R:S204 3.1 0 No No 6 6 2 1
L:L:?1 R:R:V194 4.62 1 Yes No 0 4 0 1
R:R:E305 R:R:R196 4.65 0 No No 7 4 1 2
R:R:S204 R:R:Y200 6.36 0 No No 6 7 1 2
L:L:?1 R:R:S204 4.66 1 Yes No 0 6 0 1
R:R:F302 R:R:T205 5.19 1 Yes No 6 6 1 2
R:R:F209 R:R:W298 4.01 1 Yes Yes 8 8 2 2
R:R:F209 R:R:F302 16.08 1 Yes Yes 8 6 2 1
R:R:F302 R:R:W298 5.01 1 Yes Yes 6 8 1 2
R:R:F301 R:R:F302 3.22 1 No Yes 7 6 1 1
L:L:?1 R:R:F301 11.34 1 Yes No 0 7 0 1
L:L:?1 R:R:F302 4.73 1 Yes Yes 0 6 0 1
L:L:?1 R:R:E305 3.08 1 Yes No 0 7 0 1
R:R:L324 R:R:Y328 4.69 0 No Yes 5 7 1 2
L:L:?1 R:R:L324 4.3 1 Yes No 0 5 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7UM6_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 224
Number of Links 239
Number of Hubs 26
Number of Links mediated by Hubs 108
Number of Communities 7
Number of Nodes involved in Communities 40
Number of Links involved in Communities 50
Path Summary
Number Of Nodes in MetaPath 64
Number Of Links MetaPath 63
Number of Shortest Paths 32816
Length Of Smallest Path 3
Average Path Length 13.8388
Length of Longest Path 31
Minimum Path Strength 1.22
Average Path Strength 5.4376
Maximum Path Strength 16.225
Minimum Path Correlation 0.7
Average Path Correlation 0.917021
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 46.3471
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.5771
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • developmental process   • multicellular organismal process   • head development   • forebrain development   • animal organ development   • brain development   • nervous system development   • pallium development   • multicellular organism development   • central nervous system development   • anatomical structure development   • telencephalon development   • hippocampus development   • limbic system development   • system development   • trans-synaptic signaling   • synaptic signaling   • anterograde trans-synaptic signaling   • cell-cell signaling   • chemical synaptic transmission   • response to lipid   • response to chemical   • response to estradiol   • response to oxygen-containing compound   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • postsynaptic specialization membrane   • postsynaptic specialization   • synapse   • synaptic membrane   • postsynapse   • organelle
Gene OntologyCellular Component• somatodendritic compartment   • cell body   • cellular anatomical structure   • perikaryon   • neuronal cell body   • cell periphery   • plasma membrane   • membrane   • postsynaptic specialization membrane   • postsynaptic specialization   • synapse   • synaptic membrane   • postsynapse   • organelle   • postsynaptic membrane   • cell junction   • plasma membrane region   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeH8G
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeH8G
NameLisuride
SynonymsLisuride
Identifier
FormulaC20 H26 N4 O
Molecular Weight338.447
SMILES
PubChem28864
Formal Charge0
Total Atoms51
Total Chiral Atoms2
Total Bonds54
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP47898
Sequence
>7UM6_nogp_Chain_R
GVLILTLLG FLVAATFAW NLLVLATIL RVRTFHRVP HNLVASMAV 
SDVLVAALV MPLSLVHEL SGRRWQLGR RLCQLWIAC DVLCCTASI 
WNVTAIALD RYWSITRPM EYTLRTRKC VSNVMIALT WALSAVISL 
APLLFGEEC QVSREPSYA VFSTVGAFY LPLCVVLFV YWKIYKAAK 
FRVWREQKE QRAALMVGI LIGVFVLCW IPFFLTELI SPLCSCDIP 
AIWKSIFLW LGYSNSFFN PLIYTAFNK NYNSAF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7X5HAAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-Gi1/β1/γ23.12022-09-1410.1038/s41421-022-00412-3
7X5H (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-3.12022-09-1410.1038/s41421-022-00412-3
7UM4AAmine5-Hydroxytryptamine5-HT5AHomo sapiensAS2674723--2.82022-07-2010.1038/s41594-022-00796-6
7UM7AAmine5-Hydroxytryptamine5-HT5AHomo sapiensMethylergometrine-chim(NtGi1-Go)/β1/γ22.752022-07-2010.1038/s41594-022-00796-6
7UM7 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiensMethylergometrine-2.752022-07-2010.1038/s41594-022-00796-6
7UM6AAmine5-Hydroxytryptamine5-HT5AHomo sapiensLisuride-chim(NtGi1-Go)/β1/γ22.792022-07-2010.1038/s41594-022-00796-6
7UM6 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiensLisuride-2.792022-07-2010.1038/s41594-022-00796-6
7UM5AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-chim(NtGi1-Go)/β1/γ22.732022-07-2010.1038/s41594-022-00796-6
7UM5 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-2.732022-07-2010.1038/s41594-022-00796-6




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7UM6_nogp.zip



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