Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:W57 4.5475408
2R:R:I65 2.49407
3R:R:F71 4.556508
4R:R:N77 6.0375424
5R:R:D86 5.5125409
6R:R:W107 6.344518
7R:R:L113 5.49405
8R:R:W117 5.86167615
9R:R:N131 6.1875407
10R:R:Y140 4.926508
11R:R:W141 4.99404
12R:R:Y149 7.752528
13R:R:R154 8.406528
14R:R:C192 4.9225419
15R:R:F209 6.72167618
16R:R:Y210 3.816505
17R:R:Y220 3.632509
18R:R:W298 6.425618
19R:R:F302 7.508516
20R:R:S308 2.9125403
21R:R:I315 4.985404
22R:R:Y328 6.018517
23R:R:F332 3.632506
24R:R:Y338 5.34539
25R:R:Y345 5.625608
26L:L:?1 8.11010
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F332 R:R:T54 10.17033.89YesNo067
2R:R:S331 R:R:T54 12.23273.2NoNo097
3R:R:D86 R:R:S331 13.26044.42YesNo099
4R:R:D86 R:R:N334 99.15915.39YesNo099
5R:R:N330 R:R:N334 99.44639.54NoNo099
6R:R:N330 R:R:W298 1005.65NoYes098
7R:R:C125 R:R:W298 42.38015.22NoYes068
8L:L:?1 R:R:C125 42.01336.28YesNo006
9L:L:?1 R:R:Y328 29.95025.56YesYes107
10R:R:W325 R:R:Y328 10.42636.75NoYes067
11R:R:F302 R:R:W298 45.19695.01YesYes168
12L:L:?1 R:R:F302 53.29096.74YesYes106
13R:R:A91 R:R:L92 10.95921.58NoNo045
14R:R:C120 R:R:L92 13.68261.59NoNo055
15R:R:C120 R:R:V93 16.39911.71NoNo057
16R:R:D86 R:R:N58 20.59318.08YesNo099
17R:R:N58 R:R:P335 19.55844.89NoNo099
18R:R:P335 R:R:W57 18.53074.05NoYes098
19R:R:D86 R:R:M82 86.61154.16YesNo099
20R:R:M82 R:R:N131 39.78137.01NoYes097
21R:R:N131 R:R:S81 36.29325.96YesNo079
22R:R:I162 R:R:S81 33.93664.64NoNo089
23R:R:I162 R:R:N77 33.16844.25NoYes084
24R:R:L78 R:R:N77 29.92596.87NoYes284
25R:R:D138 R:R:L78 29.29274.07NoNo298
26R:R:D138 R:R:R154 25.496613.1NoYes298
27R:R:P75 R:R:R154 24.50694.32NoYes288
28R:R:H76 R:R:P75 23.67983.05NoNo098
29R:R:H76 R:R:Y345 18.52033.27NoYes098
30R:R:M82 R:R:Y338 48.66083.59NoYes099
31L:L:?1 R:R:W117 40.79528.11YesYes105
32R:R:W107 R:R:W117 13.01828.43YesYes185
33R:R:H100 R:R:W117 10.28796.35NoYes155
34L:L:?1 R:R:S204 12.30543.56YesNo006
35R:R:S204 R:R:Y200 11.080417.8NoNo067
36L:L:?1 R:R:T126 12.63766.99YesNo007
37R:R:R139 R:R:Y338 22.54146.17NoYes399
38R:R:R139 R:R:Y220 22.0883.09NoYes099
39R:R:I223 R:R:Y220 39.71562.42NoYes099
40R:R:I223 R:R:Y140 38.01992.42NoYes098
41R:R:W141 R:R:Y140 24.33394.82YesYes048
42R:R:L137 R:R:W141 11.37453.42NoYes064
43R:R:L290 R:R:Y338 24.24744.69NoYes089
44R:R:L290 R:R:Y220 22.0883.52NoYes089
45R:R:F323 R:R:T304 10.80012.59NoNo055
46R:R:F323 R:R:P300 11.67214.33NoNo059
47R:R:I299 R:R:P300 12.53373.39NoNo069
48R:R:F209 R:R:I299 15.07726.28YesNo086
49R:R:A340 R:R:W57 16.91471.3NoYes068
50R:R:A340 R:R:F341 15.9251.39NoNo066
51R:R:F341 R:R:M286 13.6481.24NoNo068
52R:R:M286 R:R:R282 12.69641.24NoNo088
53R:R:K279 R:R:R282 11.544112.38NoNo058
54R:R:E277 R:R:K279 10.38484.05NoNo045
55L:L:?1 R:R:D121 10.613218.25YesNo108
56R:R:F209 R:R:W298 13.79686.01YesYes188
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:D121 R:R:V93 8.76 1 No No 8 7 1 2
R:R:V93 R:R:Y328 3.79 1 No Yes 7 7 2 1
R:R:M94 R:R:Y328 4.79 0 No Yes 7 7 2 1
R:R:L96 R:R:W117 3.42 0 No Yes 5 5 2 1
R:R:S97 R:R:W117 4.94 0 No Yes 6 5 2 1
R:R:H100 R:R:W107 8.46 1 No Yes 5 8 2 2
R:R:H100 R:R:W117 6.35 1 No Yes 5 5 2 1
R:R:W107 R:R:W117 8.43 1 Yes Yes 8 5 2 1
R:R:C192 R:R:W107 5.22 1 Yes Yes 9 8 2 2
R:R:C192 R:R:W117 3.92 1 Yes Yes 9 5 2 1
L:L:?1 R:R:W117 8.11 1 Yes Yes 0 5 0 1
R:R:D121 R:R:Y328 9.2 1 No Yes 8 7 1 1
L:L:?1 R:R:D121 18.25 1 Yes No 0 8 0 1
R:R:S173 R:R:V122 4.85 0 No No 8 7 2 1
L:L:?1 R:R:V122 5.89 1 Yes No 0 7 0 1
R:R:C125 R:R:W298 5.22 0 No Yes 6 8 1 2
L:L:?1 R:R:C125 6.28 1 Yes No 0 6 0 1
R:R:S169 R:R:T126 7.99 0 No No 8 7 2 1
R:R:A208 R:R:T126 3.36 0 No No 7 7 2 1
L:L:?1 R:R:T126 6.99 1 Yes No 0 7 0 1
R:R:S204 R:R:Y200 17.8 0 No No 6 7 1 2
L:L:?1 R:R:S204 3.56 1 Yes No 0 6 0 1
R:R:F302 R:R:T205 6.49 1 Yes No 6 6 1 2
R:R:F209 R:R:W298 6.01 1 Yes Yes 8 8 2 2
R:R:F209 R:R:F302 16.08 1 Yes Yes 8 6 2 1
R:R:F302 R:R:W298 5.01 1 Yes Yes 6 8 1 2
R:R:F301 R:R:F302 3.22 1 No Yes 7 6 1 1
R:R:F301 R:R:L324 3.65 1 No No 7 5 1 1
L:L:?1 R:R:F301 8.67 1 Yes No 0 7 0 1
L:L:?1 R:R:F302 6.74 1 Yes Yes 0 6 0 1
L:L:?1 R:R:L324 10.95 1 Yes No 0 5 0 1
R:R:W325 R:R:Y328 6.75 0 No Yes 6 7 2 1
L:L:?1 R:R:Y328 5.56 1 Yes Yes 0 7 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7UM7_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.05
Number of Linked Nodes 229
Number of Links 246
Number of Hubs 26
Number of Links mediated by Hubs 111
Number of Communities 4
Number of Nodes involved in Communities 30
Number of Links involved in Communities 40
Path Summary
Number Of Nodes in MetaPath 57
Number Of Links MetaPath 56
Number of Shortest Paths 44414
Length Of Smallest Path 3
Average Path Length 14.6666
Length of Longest Path 31
Minimum Path Strength 1.24
Average Path Strength 5.36938
Maximum Path Strength 13.69
Minimum Path Correlation 0.7
Average Path Correlation 0.923218
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 43.2002
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.0475
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeH8D
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeH8D
NameMethylergometrine
SynonymsMethylergobasin
Identifier
FormulaC20 H25 N3 O2
Molecular Weight339.431
SMILES
PubChem8226
Formal Charge0
Total Atoms50
Total Chiral Atoms3
Total Bonds53
Total Aromatic Bonds10

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP47898
Sequence
>7UM7_nogp_Chain_R
GVLILTLLG FLVAATFAW NLLVLATIL RVRTFHRVP HNLVASMAV 
SDVLVAALV MPLSLVHEL SGRRWQLGR RLCQLWIAC DVLCCTASI 
WNVTAIALD RYWSITRPM EYTLRTRKC VSNVMIALT WALSAVISL 
APLLFGEEC QVSREPSYA VFSTVGAFY LPLCVVLFV YWKIYKAAK 
FRVEQKEQR AALMVGILI GVFVLCWIP FFLTELISP LCSCDIPAI 
WKSIFLWLG YSNSFFNPL IYTAFNKNY NSAF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7X5HAAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-Gi1/β1/γ23.12022-09-14doi.org/10.1038/s41421-022-00412-3
7X5H (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-3.12022-09-14doi.org/10.1038/s41421-022-00412-3
7UM4AAmine5-Hydroxytryptamine5-HT5AHomo sapiensAS2674723--2.82022-07-20doi.org/10.1038/s41594-022-00796-6
7UM5AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-chim(NtGi1-Go)/β1/γ22.732022-07-20doi.org/10.1038/s41594-022-00796-6
7UM5 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiens5-CT-2.732022-07-20doi.org/10.1038/s41594-022-00796-6
7UM6AAmine5-Hydroxytryptamine5-HT5AHomo sapiensLisuride-chim(NtGi1-Go)/β1/γ22.792022-07-20doi.org/10.1038/s41594-022-00796-6
7UM6 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiensLisuride-2.792022-07-20doi.org/10.1038/s41594-022-00796-6
7UM7AAmine5-Hydroxytryptamine5-HT5AHomo sapiensMethylergometrine-chim(NtGi1-Go)/β1/γ22.752022-07-20doi.org/10.1038/s41594-022-00796-6
7UM7 (No Gprot) AAmine5-Hydroxytryptamine5-HT5AHomo sapiensMethylergometrine-2.752022-07-20doi.org/10.1038/s41594-022-00796-6




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