Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F9 8.1525423
2R:R:F17 4.7455
3R:R:N31 4.246508
4R:R:F43 10.034566
5R:R:D45 5.5075408
6R:R:R55 10.1267639
7R:R:W66 6.484504
8R:R:H93 8.91505
9R:R:W97 9.205647
10R:R:T100 4.44448
11R:R:F105 6.71468
12R:R:W164 5.2225422
13R:R:K165 6.08524
14R:R:R169 11.34424
15R:R:N176 4.735403
16R:R:N184 5.2725415
17R:R:P187 6.05448
18R:R:F195 5.905407
19R:R:F234 5.254579
20R:R:Y241 10.08407
21R:R:F261 7.744501
22R:R:Y271 11.734536
23R:R:H275 8.0675439
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:K165 R:R:R169 19.97343.71YesYes244
2R:R:F269 R:R:R169 43.227916.03NoYes044
3R:R:F269 R:R:I13 29.79577.54NoNo044
4R:R:I13 R:R:W66 28.165710.57NoYes044
5R:R:F269 R:R:L62 64.17384.87NoNo044
6R:R:L58 R:R:L62 62.66975.54NoNo044
7R:R:L58 R:R:P272 62.62773.28NoNo048
8R:R:P272 R:R:Y271 29.05415.56NoYes386
9R:R:Y241 R:R:Y271 13.033419.86YesYes076
10R:R:T274 R:R:Y241 14.15287.49NoYes057
11R:R:S270 R:R:T274 12.43183.2NoNo055
12R:R:S270 R:R:S273 10.69683.26NoNo058
13R:R:V56 R:R:W60 11.67628.58NoNo061
14R:R:N24 R:R:V56 16.25161.48NoNo096
15R:R:N24 R:R:R55 27.44516.03NoYes099
16R:R:P272 R:R:R55 33.56654.32NoYes389
17R:R:F26 R:R:T289 21.32363.89NoNo086
18R:R:T289 R:R:V30 12.59976.35NoNo068
19R:R:N31 R:R:V30 14.37674.43YesNo088
20R:R:D45 R:R:N31 31.44684.04YesYes088
21R:R:D45 R:R:I41 51.53915.6YesNo086
22R:R:I41 R:R:Q46 54.56144.12NoNo066
23R:R:F43 R:R:Q46 56.05153.51YesNo066
24R:R:F43 R:R:V129 68.75613.93YesNo067
25R:R:S101 R:R:V129 70.14833.23NoNo057
26R:R:L133 R:R:S101 71.48459.01NoNo085
27R:R:L133 R:R:L98 72.80686.92NoNo087
28R:R:F94 R:R:L98 75.40938.53NoNo057
29R:R:F94 R:R:L137 76.68954.87NoNo054
30R:R:H93 R:R:L137 79.20816.43YesNo054
31R:R:H93 R:R:W97 10014.81YesYes057
32R:R:P187 R:R:W97 45.585612.16YesYes487
33R:R:N96 R:R:P187 62.90753.26NoYes068
34R:R:N92 R:R:N96 42.33246.81NoNo086
35R:R:N92 R:R:W88 40.99629.04NoNo184
36R:R:L62 R:R:W88 55.93964.56NoNo044
37R:R:K285 R:R:T289 12.32694.5NoNo086
38R:R:E34 R:R:K285 13.907910.8NoNo068
39R:R:D45 R:R:E34 17.45496.5YesNo086
40R:R:F26 R:R:V293 14.18783.93NoNo086
41R:R:I27 R:R:N31 11.15854.25NoYes098
42R:R:H275 R:R:R55 31.187911.28YesYes399
43R:R:H275 R:R:Y271 18.78415.44YesYes396
44R:R:I91 R:R:L58 10.93472.85NoNo054
45R:R:L71 R:R:W66 14.95736.83NoYes044
46R:R:L71 R:R:Y67 13.64918.21NoNo044
47R:R:N72 R:R:Y67 12.725618.61NoNo034
48R:R:N76 R:R:Y158 12.0472.33NoNo031
49R:R:N76 R:R:P73 11.56431.63NoNo034
50R:R:N72 R:R:P73 11.52931.63NoNo034
51R:R:R81 R:R:Y158 13.663110.29NoNo031
52R:R:R81 R:R:Y85 16.37059.26NoNo032
53R:R:H93 R:R:L140 38.337816.71YesNo055
54R:R:L140 R:R:V179 30.78212.98NoNo054
55R:R:V179 R:R:Y85 29.2783.79NoNo042
56R:R:N176 R:R:Y85 14.06188.14YesNo032
57R:R:W88 R:R:Y173 15.20227.72NoNo142
58R:R:N184 R:R:N96 23.24054.09YesNo056
59R:R:L174 R:R:Y173 14.70559.38NoNo112
60R:R:P187 R:R:T100 17.53185.25YesYes488
61R:R:T100 R:R:T191 74.28994.71YesNo088
62R:R:S103 R:R:T191 73.50646.4NoNo088
63R:R:S103 R:R:S194 30.44636.52NoNo088
64R:R:F195 R:R:F234 67.3085.36YesYes079
65R:R:F234 R:R:I278 66.188610.05YesNo098
66R:R:H275 R:R:I278 48.90863.98YesNo098
67R:R:L107 R:R:S194 17.47597.51NoNo088
68R:R:L107 R:R:L108 12.29194.15NoNo087
69R:R:L198 R:R:V231 31.48874.47NoNo097
70R:R:F195 R:R:V231 41.28313.93YesNo077
71R:R:F118 R:R:L108 10.52892.44NoNo097
72R:R:I104 R:R:V128 10.53591.54NoNo066
73R:R:I104 R:R:S194 12.29893.1NoNo068
74R:R:H143 R:R:T178 20.86196.85NoNo063
75R:R:T177 R:R:T178 22.51991.57NoNo033
76R:R:I181 R:R:T177 24.1641.52NoNo053
77R:R:I181 R:R:T180 30.60033.04NoNo052
78R:R:L174 R:R:T180 12.872511.79NoNo112
79R:R:H143 R:R:V146 19.18995.54NoNo063
80R:R:K156 R:R:W154 12.36185.8NoNo024
81R:R:N150 R:R:W154 14.08982.26NoNo014
82R:R:N150 R:R:V146 17.50382.96NoNo013
83R:R:E159 R:R:K156 10.61982.7NoNo052
84R:R:E265 R:R:R169 14.201812.79NoYes034
85R:R:H224 R:R:L202 26.19289NoNo099
86R:R:L198 R:R:L202 27.80892.77NoNo099
87R:R:H205 R:R:H224 18.60929.55NoNo099
88R:R:M221 R:R:S220 12.53671.53NoNo068
89R:R:M209 R:R:S220 14.57251.53NoNo098
90R:R:H205 R:R:M209 16.60842.63NoNo099
91R:R:F234 R:R:S233 14.52363.96YesNo798
92R:R:S233 R:R:W281 12.51576.18NoNo085
93R:R:L237 R:R:Y241 17.31510.55NoYes077
94R:R:I267 R:R:Y241 14.15282.42NoYes057
95R:R:I267 R:R:S244 10.69686.19NoNo055
96R:R:K287 R:R:W281 10.55695.8NoNo075
97R:R:V293 R:R:V297 10.86471.6NoNo066
98R:R:K165 R:R:W164 10.20713.48YesYes242
99R:R:E265 R:R:F261 10.186111.66NoYes031
100R:R:T100 R:R:W97 57.52064.85YesYes487
101R:R:F195 R:R:S103 65.852811.89YesNo078
102R:R:I278 R:R:L237 17.67878.56NoNo087
103R:R:N184 R:R:T180 19.29485.85YesNo152
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 7XP5_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.15
Number of Linked Nodes 268
Number of Links 278
Number of Hubs 23
Number of Links mediated by Hubs 89
Number of Communities 7
Number of Nodes involved in Communities 28
Number of Links involved in Communities 32
Path Summary
Number Of Nodes in MetaPath 104
Number Of Links MetaPath 103
Number of Shortest Paths 36457
Length Of Smallest Path 3
Average Path Length 15.2915
Length of Longest Path 38
Minimum Path Strength 1.375
Average Path Strength 6.38961
Maximum Path Strength 17.645
Minimum Path Correlation 0.7
Average Path Correlation 0.935688
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.94118
Average % Of Corr. Nodes 50.0518
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 26.8539
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• multicellular organismal process   • system process   • nervous system process   • response to stimulus   • detection of chemical stimulus involved in sensory perception of bitter taste   • detection of chemical stimulus involved in sensory perception of taste   • detection of stimulus   • sensory perception of chemical stimulus   • sensory perception   • sensory perception of taste   • response to chemical   • detection of chemical stimulus   • sensory perception of bitter taste   • detection of stimulus involved in sensory perception   • detection of chemical stimulus involved in sensory perception   • carbohydrate metabolic process   • catabolic process   • glucan catabolic process   • beta-glucan metabolic process   • carbohydrate catabolic process   • primary metabolic process   • macromolecule catabolic process   • polysaccharide metabolic process   • glucan metabolic process   • beta-glucan catabolic process   • polysaccharide catabolic process   • metabolic process   • cellular process   • cellulose catabolic process   • macromolecule metabolic process   • cellulose metabolic process   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • membrane-bounded organelle   • cilium   • ciliary membrane   • plasma membrane bounded cell projection   • cell projection   • bounding membrane of organelle   • organelle   • plasma membrane region   • organelle membrane   • cell projection membrane
Gene OntologyCellular Component• cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • membrane-bounded organelle   • cilium   • ciliary membrane   • plasma membrane bounded cell projection   • cell projection   • bounding membrane of organelle   • organelle   • plasma membrane region   • organelle membrane   • cell projection membrane   • extracellular region   • cell surface   • binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • molecular function activator activity   • phosphorus-oxygen lyase activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activator activity   • adenylate cyclase activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • protein localization   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • localization   • cellular macromolecule localization   • regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • protein transport   • regulation of cellular localization   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of taste   • sensory organ development   • eye development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • cell population proliferation   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP59540
Sequence
>7XP5_nogp_Chain_R
TFLPIIFSI LIVVTFVIG NFANGFIAL VNSIEWFKR QKISFADQI 
LTALAVSRV GLLWVLVLN WYATELNPA FNSIEVRIT AYNVWAVIN 
HFSNWLATS LSIFYLLKI ANFSNLIFL HLKRRVKSV VLVILLGPL 
LFLVCHLFV INMNQIIWT KEYEGNMTW KIKLRSAMY LSNTTVTIL 
ANLVPFTLT LISFLLLIC SLCKHLKKM QLHGKGSQD PSMKVHIKA 
LQTVTSFLL LCAIYFLSI IMSVWSFES LENKPVFMF CEAIAFSYP 
STHPFILIW GNKKLKQTF LSVLWHVRY WV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XP6T2SensoryTaste2T2R46Homo sapiensStrychnine-chim(Gs-CtGt3)/β1/γ23.012022-10-1210.1126/science.abo1633
7XP6 (No Gprot) T2SensoryTaste2T2R46Homo sapiensStrychnine-3.012022-10-1210.1126/science.abo1633
7XP5T2SensoryTaste2T2R46Homo sapiens--chim(Gs-CtGt3)/β1/γ23.082022-10-1210.1126/science.abo1633
7XP5 (No Gprot) T2SensoryTaste2T2R46Homo sapiens--3.082022-10-1210.1126/science.abo1633
7XP4T2SensoryTaste2T2R46Homo sapiens--chim(Gs-CtGt3)/β1/γ23.012022-10-1210.1126/science.abo1633
7XP4 (No Gprot) T2SensoryTaste2T2R46Homo sapiens--3.012022-10-1210.1126/science.abo1633




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7XP5_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.