Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.151610
2R:R:F41 7.29515
3R:R:V44 1.905405
4R:R:I48 2.8025407
5R:R:I60 2.9725407
6R:R:V62 3.62407
7R:R:F63 6.074506
8R:R:F76 4.5875457
9R:R:D84 5.225649
10R:R:F87 5.495406
11R:R:L91 5.8175407
12R:R:Y98 10.09415
13R:R:W104 5.91667608
14R:R:Y116 9.022505
15R:R:Y123 6.27833617
16R:R:Y127 4.5725415
17R:R:F128 8.45833628
18R:R:F137 5.386588
19R:R:V141 5.915487
20R:R:W156 8.425424
21R:R:C159 5.5975427
22R:R:N202 8.96415
23R:R:P213 3.585409
24R:R:F214 5.156596
25R:R:Y221 6.73143778
26R:R:L223 1.92404
27R:R:L261 4.95495
28R:R:Y263 7.806517
29R:R:H264 8.25418
30R:R:R267 8.5515
31R:R:W274 18.85533
32R:R:H284 8.698534
33R:R:Y305 7.118579
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:L287 37.78942.28YesNo004
2R:R:H270 R:R:L287 35.94737.71NoNo044
3R:R:H270 R:R:H284 15.882113.14NoYes344
4L:L:?1 R:R:Y98 29.64058.69YesYes105
5L:L:?1 R:R:F41 29.41675.02YesYes105
6L:L:?1 R:R:Y123 38.42277.72YesYes107
7R:R:H264 R:R:Y123 46.897810.89YesYes187
8R:R:C210 R:R:H264 1008.85NoYes088
9R:R:C210 R:R:L261 99.6934.76NoYes085
10R:R:F214 R:R:L261 97.46717.31YesYes965
11R:R:F214 R:R:F256 97.44796.43YesNo069
12R:R:F256 R:R:L129 47.71014.87NoNo098
13R:R:L129 R:R:Y305 82.275810.55NoYes089
14R:R:T252 R:R:Y305 62.87584.99NoYes079
15R:R:L304 R:R:T252 49.48834.42NoNo077
16R:R:I255 R:R:L304 47.14728.56NoNo067
17R:R:F300 R:R:I255 40.0093.77NoNo076
18R:R:A296 R:R:F300 37.60394.16NoNo057
19R:R:A296 R:R:I48 35.18613.25NoYes057
20R:R:I48 R:R:V44 12.85023.07YesYes075
21L:L:?1 R:R:R267 34.48898YesYes105
22R:R:H264 R:R:R267 39.33095.64YesYes185
23L:L:?1 R:R:Y127 59.30666.76YesYes105
24R:R:P213 R:R:Y127 60.88014.17YesYes095
25R:R:I126 R:R:P213 61.69893.39NoYes079
26R:R:F260 R:R:I126 61.94838.79NoNo097
27R:R:F260 R:R:N297 61.545310.87NoNo699
28R:R:N297 R:R:N301 62.786214.98NoNo099
29R:R:L129 R:R:N301 58.96764.12NoNo089
30R:R:F41 R:R:P42 13.8481.44YesNo055
31R:R:L99 R:R:P42 11.57093.28NoNo045
32R:R:C299 R:R:I48 17.90333.27NoYes067
33R:R:L91 R:R:P92 10.73941.64YesNo079
34R:R:C299 R:R:W51 12.85022.61NoNo065
35R:R:D84 R:R:N301 86.67014.04YesNo099
36R:R:D84 R:R:P302 50.56293.22YesNo499
37R:R:P302 R:R:Y306 49.48196.95NoNo096
38R:R:S59 R:R:Y306 25.412611.45NoNo096
39R:R:F63 R:R:S59 15.39596.61YesNo069
40R:R:F312 R:R:Y306 23.410521.66NoNo086
41R:R:F63 R:R:N74 21.28696.04YesNo067
42R:R:N74 R:R:R315 15.50474.82NoNo074
43R:R:R315 R:R:Y67 12.434414.4NoNo045
44R:R:F312 R:R:F63 14.96745.36NoYes086
45R:R:D84 R:R:S125 46.26464.42YesNo099
46R:R:S125 R:R:S83 44.94693.26NoNo098
47R:R:F128 R:R:S83 43.61653.96YesNo088
48R:R:F128 R:R:N79 18.210314.5YesNo289
49R:R:N79 R:R:W156 16.73286.78NoYes294
50R:R:C159 R:R:F128 19.95014.19YesYes278
51R:R:C159 R:R:W156 16.9955.22YesYes274
52R:R:V75 R:R:W156 21.645113.48NoYes064
53R:R:F76 R:R:V75 15.42795.24YesNo076
54L:L:?1 R:R:Y119 15.440725.1YesNo005
55R:R:L118 R:R:Y119 13.32358.21NoNo065
56R:R:M122 R:R:Y123 15.88215.99NoYes077
57R:R:F87 R:R:M122 25.14394.98YesNo067
58R:R:L118 R:R:R94 12.677519.44NoNo066
59R:R:R94 R:R:T90 13.61149.06NoNo067
60R:R:Y97 R:R:Y98 25.42547.94NoYes055
61R:R:W104 R:R:Y97 23.14834.82YesNo085
62L:L:?1 R:R:L173 17.94813.42YesNo005
63R:R:L173 R:R:Y116 13.71377.03NoYes055
64R:R:F256 R:R:L217 50.44777.31NoNo097
65R:R:L217 R:R:Y221 49.09174.69NoYes078
66R:R:S133 R:R:Y221 11.922713.99NoYes098
67R:R:C220 R:R:S133 10.01025.16NoNo069
68R:R:I224 R:R:Y221 47.79333.63NoYes088
69R:R:F137 R:R:I224 37.00275.02YesNo088
70R:R:F137 R:R:V141 21.037510.49YesYes887
71R:R:M140 R:R:V141 17.0273.04NoYes087
72R:R:A139 R:R:M140 14.90981.61NoNo088
73R:R:A139 R:R:H148 12.77981.46NoNo083
74R:R:H148 R:R:V149 10.89935.54NoNo034
75L:L:?1 R:R:N202 10.73945.65YesYes105
76R:R:L271 R:R:N202 12.82465.49NoYes055
77R:R:I249 R:R:Y221 14.89067.25NoYes078
78R:R:I225 R:R:I249 13.02294.42NoNo057
79R:R:I224 R:R:L228 10.38121.43NoNo088
80R:R:T248 R:R:T252 12.5561.57NoNo077
81R:R:A308 R:R:T248 10.00381.68NoNo067
82R:R:H270 R:R:W274 18.152715.87NoYes343
83R:R:T273 R:R:W274 11.622120.62NoYes033
84R:R:F87 R:R:L91 11.62217.31YesYes067
85R:R:M122 R:R:Y263 12.27454.79NoYes077
86R:R:H264 R:R:Y263 14.09757.62YesYes187
87R:R:Y221 R:R:Y305 27.39545.96YesYes789
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:F41 5.02 1 Yes Yes 0 5 0 1
L:L:?1 R:R:Y98 8.69 1 Yes Yes 0 5 0 1
L:L:?1 R:R:Y119 25.1 1 Yes No 0 5 0 1
L:L:?1 R:R:Y123 7.72 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Y127 6.76 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L165 7.98 1 Yes No 0 4 0 1
L:L:?1 R:R:I166 8.23 1 Yes No 0 7 0 1
L:L:?1 R:R:S169 4.95 1 Yes No 0 5 0 1
L:L:?1 R:R:S170 16.08 1 Yes No 0 7 0 1
L:L:?1 R:R:L173 3.42 1 Yes No 0 5 0 1
L:L:?1 R:R:M201 18.63 1 Yes No 0 5 0 1
L:L:?1 R:R:N202 5.65 1 Yes Yes 0 5 0 1
L:L:?1 R:R:A205 6.49 1 Yes No 0 5 0 1
L:L:?1 R:R:R267 8 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L291 11.4 1 Yes No 0 5 0 1
R:R:F36 R:R:Y98 12.38 0 No Yes 6 5 2 1
R:R:F41 R:R:Y45 16.5 1 Yes No 5 8 1 2
R:R:F41 R:R:Y98 11.35 1 Yes Yes 5 5 1 1
R:R:Y97 R:R:Y98 7.94 0 No Yes 5 5 2 1
R:R:L173 R:R:S115 4.5 0 No No 5 6 1 2
R:R:L173 R:R:Y116 7.03 0 No Yes 5 5 1 2
R:R:L118 R:R:Y119 8.21 0 No No 6 5 2 1
R:R:M122 R:R:Y123 5.99 0 No Yes 7 7 2 1
R:R:M122 R:R:Y263 4.79 0 No Yes 7 7 2 2
R:R:A205 R:R:Y123 4 1 No Yes 5 7 1 1
R:R:H264 R:R:Y123 10.89 1 Yes Yes 8 7 2 1
R:R:R267 R:R:Y123 6.17 1 Yes Yes 5 7 1 1
R:R:I166 R:R:Y127 4.84 1 No Yes 7 5 1 1
R:R:P213 R:R:Y127 4.17 0 Yes Yes 9 5 2 1
R:R:N202 R:R:R267 14.46 1 Yes Yes 5 5 1 1
R:R:N202 R:R:T268 10.24 1 Yes No 5 6 1 2
R:R:L271 R:R:N202 5.49 0 No Yes 5 5 2 1
R:R:H264 R:R:Y263 7.62 1 Yes Yes 8 7 2 2
R:R:R267 R:R:Y263 8.23 1 Yes Yes 5 7 1 2
R:R:L291 R:R:Y263 11.72 0 No Yes 5 7 1 2
R:R:H264 R:R:R267 5.64 1 Yes Yes 8 5 2 1
R:R:H270 R:R:L287 7.71 3 No No 4 4 2 1
R:R:G209 R:R:Y123 2.9 0 No Yes 5 7 2 1
R:R:V208 R:R:Y127 2.52 0 No Yes 4 5 2 1
L:L:?1 R:R:L287 2.28 1 Yes No 0 4 0 1
R:R:F41 R:R:R38 2.14 1 Yes No 5 4 1 2
R:R:F41 R:R:P42 1.44 1 Yes No 5 5 1 2
R:R:L198 R:R:M201 1.41 0 No No 4 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9JH6_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.1
Number of Linked Nodes 242
Number of Links 263
Number of Hubs 33
Number of Links mediated by Hubs 142
Number of Communities 9
Number of Nodes involved in Communities 39
Number of Links involved in Communities 48
Path Summary
Number Of Nodes in MetaPath 88
Number Of Links MetaPath 87
Number of Shortest Paths 41559
Length Of Smallest Path 3
Average Path Length 13.7783
Length of Longest Path 27
Minimum Path Strength 1.29
Average Path Strength 6.4792
Maximum Path Strength 23.06
Minimum Path Correlation 0.7
Average Path Correlation 0.913566
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 43.0053
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.5069
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9NS75
Sequence
>9JH6_nogp_Chain_R
ENFKREFFP IVYLIIFFW GVLGNGLSI YVFLQPYKK STSVNVFML 
NLAISDLLF ISTLPFRAD YYLRGSNWI FGDLACRIM SYSLYVNMY 
SSIYFLTVL SVVRFLAMV HPFRLLHVT SIRSAWILC GIIWILIMA 
SSIMLLDKI AKLQTMNYI ALVVGCLLP FFTLSICYL LIIRVLLKG 
LRVSHRKAL TTIIITLII FFLCFLPYH TLRTVHLTT WKVGLCKDR 
LHKALVITL ALAAANACF NPLLYYFAG ENFKDRL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6RZ6ALipidLeukotrieneCysLT2Homo sapiensONO-2570366--2.432019-12-11doi.org/10.1038/s41467-019-13348-2
6RZ7ALipidLeukotrieneCysLT2Homo sapiensONO-2570366--2.432019-12-11doi.org/10.1038/s41467-019-13348-2
6RZ8ALipidLeukotrieneCysLT2Homo sapiensONO-2080365--2.72019-12-11doi.org/10.1038/s41467-019-13348-2
6RZ9ALipidLeukotrieneCysLT2Homo sapiensONO-2770372--2.732019-12-11doi.org/10.1038/s41467-019-13348-2
9IXXALipidLeukotrieneCysLT2Homo sapiensLTD4-chim(NtGi1-Gs-CtGq)/β1/γ23.152025-04-02doi.org/10.1073/pnas.2417148122
9IXX (No Gprot) ALipidLeukotrieneCysLT2Homo sapiensLTD4-3.152025-04-02doi.org/10.1073/pnas.2417148122
9JH5ALipidLeukotrieneCysLT2Homo sapiensC16:0 Ceramide-chim(NtGi1-Gs-CtGq)/β1/γ22.762025-04-23doi.org/10.1038/s41586-025-08792-8
9JH5 (No Gprot) ALipidLeukotrieneCysLT2Homo sapiensC16:0 Ceramide-2.762025-04-23doi.org/10.1038/s41586-025-08792-8
9JH6ALipidLeukotrieneCysLT2Homo sapiensC20:0 Ceramide-chim(NtGi1-Gs-CtGq)/β1/γ22.892025-04-23doi.org/10.1038/s41586-025-08792-8
9JH6 (No Gprot) ALipidLeukotrieneCysLT2Homo sapiensC20:0 Ceramide-2.892025-04-23doi.org/10.1038/s41586-025-08792-8




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Download 9JH6_nogp.zip



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