Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:I85 4.0625444
2R:R:P88 4.39407
3R:R:N119 3.884509
4R:R:L122 3.8775409
5R:R:M132 8.332507
6R:R:H150 6.4375488
7R:R:I155 3.225477
8R:R:W167 7.902539
9R:R:F169 9.0225407
10R:R:F179 4.005406
11R:R:K182 8.995414
12R:R:R199 9.1925409
13R:R:V214 3.115406
14R:R:E236 8.76415
15R:R:I242 3.5425435
16R:R:Q261 7.5675412
17R:R:K262 5.7425411
18R:R:M266 4.78143714
19R:R:Y269 7.98413
20R:R:F278 7.0775426
21R:R:F280 9.315415
22R:R:Y281 7.24429716
23R:R:F282 7.2225428
24R:R:F292 6.622507
25R:R:M300 4.504598
26R:R:W336 5.252528
27R:R:H340 9.1125428
28R:R:R343 8.715406
29R:R:R357 5.182555
30R:R:L364 4.0325403
31R:R:Y387 7.50754117
32R:R:F397 4.48407
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:P87 R:R:P88 12.60171.95NoYes077
2R:R:M245 R:R:P88 16.08786.71NoYes017
3R:R:P88 R:R:P89 35.91991.95YesNo073
4R:R:P89 R:R:R357 37.38544.32NoYes035
5R:R:R357 R:R:Y350 47.91489.26YesNo052
6R:R:L361 R:R:Y350 35.82318.21NoNo032
7R:R:L361 R:R:P93 34.24144.93NoNo034
8R:R:G92 R:R:P93 32.64694.06NoNo044
9R:R:G92 R:R:S362 29.4191.86NoNo043
10R:R:I96 R:R:S362 27.78574.64NoNo053
11R:R:I96 R:R:L365 22.80832.85NoNo053
12R:R:L365 R:R:Y369 21.12339.38NoNo033
13R:R:F100 R:R:Y369 10.839318.57NoNo043
14R:R:L364 R:R:Y350 77.07553.52YesNo032
15R:R:K346 R:R:L364 79.07688.46NoYes043
16R:R:D368 R:R:K346 84.07369.68NoNo044
17R:R:D368 R:R:R343 86.15242.38NoYes046
18R:R:L277 R:R:R343 90.13563.64NoYes066
19R:R:L277 R:R:Y281 1003.52NoYes066
20R:R:K182 R:R:Y281 96.462213.14YesYes146
21R:R:E236 R:R:K182 78.986414.85YesYes154
22R:R:E236 R:R:P178 83.00193.14YesNo155
23R:R:P178 R:R:V177 84.86773.53NoNo055
24R:R:Q181 R:R:V177 76.03622.87NoNo065
25R:R:H150 R:R:Q181 74.24147.42YesNo886
26R:R:H150 R:R:S379 73.66694.18YesNo089
27R:R:I151 R:R:S379 15.97164.64NoNo069
28R:R:I151 R:R:I155 12.46612.94NoYes767
29R:R:D147 R:R:S379 67.34027.36NoNo099
30R:R:D147 R:R:N119 58.85095.39NoYes099
31R:R:G115 R:R:N119 10.29051.7NoYes089
32R:R:N119 R:R:P383 19.79994.89YesNo099
33R:R:A144 R:R:N119 31.36224.69NoYes099
34R:R:F397 R:R:P383 17.0112.89YesNo079
35R:R:F397 R:R:T121 12.87285.19YesNo076
36R:R:A144 R:R:L122 30.67794.73NoYes099
37R:R:I126 R:R:L122 37.40484.28NoYes079
38R:R:I126 R:R:M132 35.7652.92NoYes077
39R:R:G186 R:R:Y281 57.92122.9NoYes066
40R:R:G186 R:R:S229 56.97223.71NoNo068
41R:R:I187 R:R:S229 56.0624.64NoNo078
42R:R:I187 R:R:W226 54.486816.44NoNo079
43R:R:S142 R:R:W226 51.80126.18NoNo099
44R:R:I222 R:R:S142 58.25696.19NoNo079
45R:R:I138 R:R:I222 19.69662.94NoNo067
46R:R:I138 R:R:V214 17.91484.61NoYes066
47R:R:I222 R:R:L139 48.88312.85NoNo077
48R:R:A194 R:R:L139 51.81413.15NoNo077
49R:R:A194 R:R:E221 51.07176.03NoNo076
50R:R:D198 R:R:E221 50.26476.5NoNo086
51R:R:D198 R:R:P136 49.22533.22NoNo088
52R:R:P136 R:R:R199 44.893520.18NoYes089
53R:R:N137 R:R:R199 31.01364.82NoYes089
54R:R:D147 R:R:T188 10.3684.34NoNo099
55R:R:G135 R:R:P136 13.54424.06NoNo078
56R:R:G135 R:R:N134 11.62691.7NoNo078
57R:R:L232 R:R:V228 10.52292.98NoNo054
58R:R:A233 R:R:K182 14.29953.21NoYes074
59R:R:A233 R:R:F179 10.80054.16NoYes076
60R:R:I157 R:R:V177 31.024.61NoNo065
61R:R:F169 R:R:I157 27.77928.79YesNo076
62R:R:F169 R:R:W167 19.451312.03YesYes079
63R:R:I242 R:R:W167 10.76184.7YesYes359
64R:R:K182 R:R:Y269 13.05364.78YesYes143
65R:R:V185 R:R:Y281 17.49526.31NoYes076
66R:R:H340 R:R:L277 29.87733.86YesNo086
67R:R:F280 R:R:Y281 25.558416.5YesYes156
68R:R:F280 R:R:L284 29.09624.87YesNo056
69R:R:I288 R:R:L284 23.0734.28NoNo076
70R:R:F292 R:R:I288 18.99292.51YesNo077
71R:R:R199 R:R:V321 28.96719.15YesNo098
72R:R:M300 R:R:V321 27.2243.04YesNo088
73R:R:M300 R:R:R318 17.75347.44YesNo087
74R:R:A219 R:R:V214 12.1951.7NoYes036
75R:R:M266 R:R:Y269 15.33254.79YesYes143
76R:R:I254 R:R:M245 10.83937.29NoNo041
77R:R:F282 R:R:H340 15.558414.71YesYes288
78R:R:F282 R:R:L337 10.83933.65YesNo085
79R:R:R199 R:R:V325 11.94322.62YesNo098
80R:R:V325 R:R:Y293 10.09682.52NoNo089
81R:R:H314 R:R:R318 12.07886.77NoNo047
82R:R:H314 R:R:N312 10.09682.55NoNo042
83R:R:N378 R:R:W336 15.91353.39NoYes298
84R:R:C335 R:R:N378 14.29959.45NoNo089
85R:R:C335 R:R:V331 12.55651.71NoNo086
86R:R:M132 R:R:N137 30.451912.62YesNo078
87R:R:V185 R:R:W336 16.04264.9NoYes078
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 5GLI
Class A
SubFamily Peptide
Type Endothelin
SubType ETB
Species Homo sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 2.5
Date 2016-09-07
D.O.I. 10.1038/nature19319
Net Summary
Imin 2.85
Number of Linked Nodes 290
Number of Links 317
Number of Hubs 32
Number of Links mediated by Hubs 124
Number of Communities 11
Number of Nodes involved in Communities 49
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 88
Number Of Links MetaPath 87
Number of Shortest Paths 41624
Length Of Smallest Path 3
Average Path Length 15.397
Length of Longest Path 40
Minimum Path Strength 1.38
Average Path Strength 5.85805
Maximum Path Strength 15.975
Minimum Path Correlation 0.7
Average Path Correlation 0.928847
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.0303
Average % Of Corr. Nodes 46.8717
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 31.005
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP24530
Sequence
>5GLI_Chain_R
ISPPPCQGP IEIKETFKY INTVVSCLV FVLGIIGNS TLLYIIYKN 
KCMRNGPNI LIASLALGD LLHIVIAIP INVYKLLAE DWPFGAEMC 
KLVPFIQKA SVGITVLSL CALSIDRYR AVASWSRIK GIGVPKWTA 
VEIVLIWVV SVVLAVPEA IGFDIITMD YKGSYLRIC LLHPVQKTA 
FMQFYATAK DWWLFSFYF CLPLAITAF FYTLMTCEM LRKLNDHLK 
QRREVAKTV FCLVLVFAL CWLPLHLAR ILKLTLYNQ NDPNRCELL 
SFLLVLDYI GINMASLNS CANPIALYL VSKRFKNAF KSALCC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5GLHAPeptideEndothelinETBHomo sapiensEndothelin-1--2.82016-09-0710.1038/nature19319
5X93APeptideEndothelinETBHomo sapiensK-8794--2.22017-08-1610.1038/nsmb.3450
5XPRAPeptideEndothelinETBHomo sapiensBosentan--3.62017-08-1610.1038/nsmb.3450
6IGKAPeptideEndothelinETBHomo sapiensEndothelin-3--22018-11-2110.1038/s41467-018-07094-0
6IGLAPeptideEndothelinETBHomo sapiensIRL1620--2.72018-11-2110.1038/s41467-018-07094-0
6K1QAPeptideEndothelinETBHomo sapiensIRL2500--2.72019-07-1710.1038/s42003-019-0482-7
6LRYAPeptideEndothelinETBHomo sapiensSarafotoxin-B--32020-02-1210.1016/j.bbrc.2019.12.091
8HBDAPeptideEndothelinETBHomo sapiensIRL1620-Gi1/&β;1/&γ;22.992023-03-2210.1038/s41467-023-36998-9
8HCXAPeptideEndothelinETBHomo sapiensEndothelin-1-chim(NtGi2L-Gs-CtGq)/&β;1/&γ;23.52023-03-2210.1038/s41467-023-36998-9
8IY5APeptideEndothelinETBHomo sapiensEndothelin-1-Gi1/&β;1/&γ;22.82023-08-1610.7554/eLife.85821
8IY6APeptideEndothelinETBHomo sapiensEndothelin-1--3.132023-08-1610.7554/eLife.85821




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 5GLI.zip



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