Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:W4 10.202500
2L:L:W14 9.332500
3L:L:D16 8.622510
4L:L:?17 7.92429710
5R:R:R57 9.425405
6R:R:Y61 7.368517
7R:R:F92 4.51167608
8R:R:D100 6.0075479
9R:R:L101 4.63408
10R:R:M108 5.228517
11R:R:F120 6.2775428
12R:R:Y153 4.645408
13R:R:R158 5.5175406
14R:R:W165 6.39655
15R:R:Q166 8.59457
16R:R:Y189 8.89417
17R:R:V195 3.67424
18R:R:H207 8.48415
19R:R:W209 8.165406
20R:R:L226 5.08408
21R:R:F227 8.1375408
22R:R:Y238 5.805409
23R:R:W346 8.528508
24R:R:Y350 8.39407
25R:R:R356 5.63404
26R:R:H376 7.22415
27R:R:Y380 6.44286717
28R:R:Y390 5.516569
29R:R:F392 2.916506
30R:R:F397 6.935448
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:Y380 R:R:Y61 10.23915.96YesYes177
2R:R:H376 R:R:Y380 21.72027.62YesYes157
3R:R:H376 R:R:I372 55.03215.3YesNo054
4L:L:W14 R:R:I372 47.2158.22YesNo004
5L:L:W14 L:L:W4 62.61921.56YesYes000
6L:L:W4 R:R:P114 39.10125.4YesNo005
7L:L:W14 R:R:H364 13.41825.29YesNo001
8L:L:L5 R:R:H364 11.83755.14NoNo001
9L:L:L5 R:R:R365 10.15944.86NoNo003
10L:L:W4 R:R:Q204 20.16163.29YesNo004
11R:R:Q204 R:R:V202 11.79775.73NoNo041
12L:L:?17 L:L:D16 54.92814.4YesYes100
13L:L:D16 R:R:R356 39.64584.76YesYes004
14L:L:D16 R:R:Y189 14.062411.49YesYes107
15L:L:?17 R:R:V138 37.363318.11YesNo007
16L:L:?17 R:R:Y350 48.65627.6YesYes007
17R:R:C391 R:R:L93 17.00024.76NoNo078
18R:R:S379 R:R:Y380 23.66395.09NoYes077
19R:R:S379 R:R:W346 23.637411.12NoYes078
20R:R:F342 R:R:W346 1009.02NoYes098
21R:R:F342 R:R:M234 99.26286.22NoNo098
22R:R:M234 R:R:V339 98.63856.09NoNo088
23R:R:V339 R:R:Y238 97.13083.79NoYes089
24R:R:R152 R:R:Y238 86.66378.23NoYes099
25R:R:R152 R:R:Y390 25.54357.2NoYes099
26R:R:L93 R:R:Y390 20.32997.03NoYes089
27R:R:I148 R:R:R152 70.67963.76NoNo099
28R:R:F92 R:R:I148 69.76753.77YesNo089
29R:R:E151 R:R:F92 50.73724.66NoYes098
30R:R:F92 R:R:I175 13.22123.77YesNo087
31R:R:I175 R:R:S95 12.041212.39NoNo079
32R:R:S95 R:R:W179 10.85684.94NoNo099
33R:R:F120 R:R:P114 34.43215.78YesNo085
34R:R:C127 R:R:F120 13.07955.59NoYes298
35R:R:C205 R:R:F120 13.22568.38NoYes298
36R:R:C127 R:R:V195 11.57183.42NoYes294
37R:R:C205 R:R:V195 11.56963.42NoYes294
38R:R:E151 R:R:W165 41.05827.63NoYes595
39R:R:S154 R:R:W165 19.45327.41NoYes055
40R:R:R158 R:R:S154 18.34853.95YesNo065
41R:R:R158 R:R:Y153 32.18516.17YesYes068
42R:R:L150 R:R:Y153 13.87431.17NoYes068
43R:R:Q161 R:R:W165 20.61774.38NoYes055
44R:R:Q161 R:R:R158 18.390510.51NoYes056
45R:R:L240 R:R:Y153 13.89425.86NoYes068
46R:R:L335 R:R:Y238 13.1065.86NoYes089
47R:R:R215 R:R:R356 10.39854.26NoYes054
48R:R:L203 R:R:V195 16.47111.49NoYes034
49R:R:L203 R:R:P197 13.12823.28NoNo031
50R:R:F227 R:R:Y350 13.254412.38YesYes087
51R:R:F227 R:R:F228 10.42065.36YesNo085
52R:R:I372 R:R:I375 10.19924.42NoNo046
53L:L:W14 R:R:R356 31.63839YesYes004
54L:L:?17 R:R:H376 35.038710.42YesYes105
55R:R:M108 R:R:Y380 10.01777.18YesYes177
56R:R:V138 R:R:W346 37.15084.9NoYes078
57R:R:W346 R:R:Y350 43.7997.72YesYes087
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:R57 14.3 0 No Yes 0 5 0 1
L:L:?1 R:R:G369 7.32 0 No No 0 3 0 1
L:L:W4 R:R:P114 5.4 0 Yes No 0 5 0 1
L:L:W4 R:R:N115 15.82 0 Yes No 0 5 0 1
L:L:W4 R:R:S368 4.94 0 Yes No 0 5 0 1
L:L:L5 R:R:H364 5.14 0 No No 0 1 0 1
L:L:L5 R:R:R365 4.86 0 No No 0 3 0 1
L:L:E6 R:R:V202 5.7 3 No No 0 1 0 1
L:L:Y12 R:R:V198 8.83 0 No No 0 1 0 1
L:L:G13 R:R:R356 4.5 0 No Yes 0 4 0 1
L:L:W14 R:R:R356 9 0 Yes Yes 0 4 0 1
L:L:W14 R:R:H364 5.29 0 Yes No 0 1 0 1
L:L:W14 R:R:I372 8.22 0 Yes No 0 4 0 1
L:L:M15 R:R:H207 5.25 0 No Yes 0 5 0 1
L:L:D16 R:R:Y189 11.49 1 Yes Yes 0 7 0 1
L:L:D16 R:R:H207 6.3 1 Yes Yes 0 5 0 1
L:L:D16 R:R:N353 16.16 1 Yes No 0 7 0 1
L:L:D16 R:R:R356 4.76 1 Yes Yes 0 4 0 1
L:L:?17 R:R:M134 4.58 1 Yes No 0 8 0 1
L:L:?17 R:R:V138 18.11 1 Yes No 0 7 0 1
L:L:?17 R:R:L222 5.61 1 Yes No 0 7 0 1
L:L:?17 R:R:Y350 7.6 1 Yes Yes 0 7 0 1
L:L:?17 R:R:H376 10.42 1 Yes Yes 0 5 0 1
L:L:?17 R:R:Y380 4.75 1 Yes Yes 0 7 0 1
R:R:L116 R:R:R57 6.07 1 No Yes 5 5 2 1
R:R:A370 R:R:R57 4.15 0 No Yes 3 5 2 1
R:R:R57 R:R:S373 13.18 0 Yes No 5 5 1 2
R:R:M108 R:R:Y61 4.79 1 Yes Yes 7 7 2 2
R:R:S373 R:R:Y61 3.82 0 No Yes 5 7 2 2
R:R:Y380 R:R:Y61 5.96 1 Yes Yes 7 7 1 2
R:R:C107 R:R:M134 6.48 0 No No 7 8 2 1
R:R:C107 R:R:Y380 10.75 0 No Yes 7 7 2 1
R:R:M108 R:R:Y380 7.18 1 Yes Yes 7 7 2 1
R:R:F120 R:R:P114 5.78 2 Yes No 8 5 2 1
R:R:T119 R:R:V202 4.76 0 No No 4 1 2 1
R:R:S131 R:R:Y189 5.09 0 No Yes 5 7 2 1
R:R:S131 R:R:T193 7.99 0 No No 5 6 2 2
R:R:V138 R:R:W346 4.9 0 No Yes 7 8 1 2
R:R:H207 R:R:Y189 14.16 1 Yes Yes 5 7 1 1
R:R:W218 R:R:Y189 4.82 0 No Yes 7 7 2 1
R:R:H207 R:R:T193 8.21 1 Yes No 5 6 1 2
R:R:Q204 R:R:V198 4.3 0 No No 4 1 1 1
R:R:G199 R:R:P200 4.06 3 No No 1 3 1 2
R:R:Q204 R:R:V202 5.73 0 No No 4 1 1 1
R:R:R215 R:R:R356 4.26 0 No Yes 5 4 2 1
R:R:L222 R:R:L226 5.54 0 No Yes 7 8 1 2
R:R:L226 R:R:Y350 5.86 0 Yes Yes 8 7 2 1
R:R:F227 R:R:Y350 12.38 0 Yes Yes 8 7 2 1
R:R:W346 R:R:Y350 7.72 0 Yes Yes 8 7 2 1
R:R:S379 R:R:W346 11.12 0 No Yes 7 8 2 2
R:R:H376 R:R:V349 5.54 1 Yes No 5 7 1 2
R:R:G360 R:R:P361 4.06 0 No No 1 1 2 1
R:R:G362 R:R:R365 7.51 0 No No 4 3 2 1
R:R:I372 R:R:I375 4.42 0 No No 4 6 1 2
R:R:H376 R:R:I372 5.3 1 Yes No 5 4 1 1
R:R:H376 R:R:Y380 7.62 1 Yes Yes 5 7 1 1
R:R:S379 R:R:Y380 5.09 0 No Yes 7 7 2 1
R:R:T111 R:R:Y380 3.75 0 No Yes 7 7 2 1
L:L:A11 R:R:P361 3.74 0 No No 0 1 0 1
L:L:W4 R:R:Q204 3.29 0 Yes No 0 4 0 1
L:L:E6 R:R:G199 3.27 3 No No 0 1 0 1
L:L:E7 R:R:G199 3.27 3 No No 0 1 0 1
L:L:E9 R:R:P361 3.14 0 No No 0 1 0 1
L:L:W14 R:R:A352 2.59 0 Yes No 0 5 0 1
L:L:Y12 R:R:V206 2.52 0 No No 0 4 0 1
L:L:E9 R:R:R365 2.33 0 No No 0 3 0 1
L:L:G2 R:R:G118 2.11 0 No No 0 4 0 1
R:R:G369 R:R:P371 2.03 0 No No 3 5 1 2
R:R:L113 R:R:P114 1.64 0 No No 5 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7F8V_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.76
Number of Linked Nodes 274
Number of Links 293
Number of Hubs 30
Number of Links mediated by Hubs 119
Number of Communities 7
Number of Nodes involved in Communities 32
Number of Links involved in Communities 37
Path Summary
Number Of Nodes in MetaPath 58
Number Of Links MetaPath 57
Number of Shortest Paths 73198
Length Of Smallest Path 3
Average Path Length 16.3718
Length of Longest Path 33
Minimum Path Strength 1.305
Average Path Strength 6.68079
Maximum Path Strength 18.69
Minimum Path Correlation 0.7
Average Path Correlation 0.925394
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 40.4167
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.1366
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• enzyme regulator activity   • molecular function regulator activity   • 1-phosphatidylinositol-3-kinase regulator activity   • kinase regulator activity   • protein binding   • binding   • signaling receptor binding   • type B gastrin/cholecystokinin receptor binding   • G protein-coupled receptor binding   • cholecystokinin receptor binding   • neuropeptide receptor binding   • amide binding   • peptide hormone binding   • hormone binding   • peptide receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • gastrin receptor activity   • G protein-coupled peptide receptor activity   • signaling receptor activity   • transmembrane signaling receptor activity   • neuropeptide receptor activity   • cholecystokinin receptor activity   • localization   • multicellular organismal process   • system process   • digestion   • secretion   • transport   • digestive system process   • acid secretion   • gastric acid secretion   • establishment of localization   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus
Gene OntologyBiological Process• localization   • multicellular organismal process   • system process   • digestion   • secretion   • transport   • digestive system process   • acid secretion   • gastric acid secretion   • establishment of localization   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • cholecystokinin signaling pathway   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • cell surface receptor signaling pathway   • developmental process   • gland development   • animal organ development   • anatomical structure development   • phospholipase C-activating G protein-coupled receptor signaling pathway   • multicellular organism development   • digestive system development   • tube development   • digestive tract development   • system development   • chemical homeostasis   • homeostatic process   • regulation of pH   • monoatomic ion homeostasis   • monoatomic cation homeostasis   • pH reduction   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • membrane-bounded organelle   • intracellular organelle   • intracellular anatomical structure   • organelle   • intracellular membrane-bounded organelle   • hormone activity   • protein binding   • binding   • molecular function activator activity   • signaling receptor binding   • molecular function regulator activity   • signaling receptor regulator activity   • receptor ligand activity   • signaling receptor activator activity   • response to nutrient levels   • response to food   • response to chemical   • extracellular region   • extracellular space   • G-protein beta-subunit binding   • fibroblast proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • G-protein beta/gamma-subunit complex binding   • G protein-coupled receptor binding   • cation binding   • metal ion binding   • positive regulation of neural precursor cell proliferation   • neural precursor cell proliferation   • regulation of neural precursor cell proliferation   • reactive oxygen species metabolic process   • regulation of superoxide metabolic process   • positive regulation of reactive oxygen species metabolic process   • superoxide metabolic process   • positive regulation of metabolic process   • superoxide anion generation   • metabolic process   • positive regulation of superoxide anion generation   • regulation of superoxide anion generation   • regulation of metabolic process   • regulation of reactive oxygen species metabolic process   • regulation of calcium ion transport   • regulation of localization   • regulation of transport   • regulation of monoatomic ion transport   • metal ion transport   • calcium ion transport   • monoatomic ion transport   • regulation of metal ion transport   • monoatomic cation transport   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • negative regulation of signaling   • negative regulation of biological process   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • negative regulation of cellular process   • regulation of G protein-coupled receptor signaling pathway   • adenylate cyclase-activating adrenergic receptor signaling pathway   • negative regulation of response to stimulus   • negative regulation of signal transduction   • negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell division   • regulation of body fluid levels   • renal system process   • positive regulation of urine volume   • regulation of urine volume   • regulation of vascular associated smooth muscle cell proliferation   • positive regulation of vascular associated smooth muscle cell proliferation   • regulation of smooth muscle cell proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • muscle cell proliferation   • vascular associated smooth muscle cell proliferation   • gamma-aminobutyric acid signaling pathway   • purinergic nucleotide receptor signaling pathway   • G protein-coupled purinergic receptor signaling pathway   • G protein-coupled adenosine receptor signaling pathway   • regulation of molecular function   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • negative regulation of molecular function   • negative regulation of catalytic activity   • negative regulation of adenylate cyclase activity   • regulated exocytosis   • regulation of calcium ion-dependent exocytosis   • negative regulation of transport   • negative regulation of regulated secretory pathway   • vesicle-mediated transport   • regulation of regulated secretory pathway   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • negative regulation of exocytosis   • negative regulation of secretion by cell   • calcium-ion regulated exocytosis   • negative regulation of calcium ion-dependent exocytosis   • export from cell   • regulation of vesicle-mediated transport   • regulation of secretion   • exocytosis   • regulation of exocytosis   • regulation of programmed cell death   • negative regulation of apoptotic signaling pathway   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • apoptotic signaling pathway   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • regulation of apoptotic signaling pathway   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of cell migration   • regulation of locomotion   • positive regulation of cell motility   • regulation of cell migration   • cell migration   • cell motility   • locomotion   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • negative regulation of synaptic transmission   • chemical synaptic transmission   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • response to nutrient   • midbody   • dense core granule   • intracellular vesicle   • endomembrane system   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • neuronal dense core vesicle   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • somatodendritic compartment   • dendrite   • dendritic tree   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • neuron to neuron synapse   • hippocampal mossy fiber to CA3 synapse   • cell body   • ciliary basal body
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodePCA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodePCA
NamePidolic acid
SynonymsL-pyroglutamic acid
Identifier
FormulaC5 H7 N O3
Molecular Weight129.114
SMILES
PubChem7405
Formal Charge0
Total Atoms16
Total Chiral Atoms1
Total Bonds16
Total Aromatic Bonds0

CodeNFA
PDB ResiduesL:L:?17
Environment DetailsOpen EMBL-EBI Page
CodeNFA
NamePhenylalanylamide
Synonyms
  • Phenylalanine amide
  • (S)-2-amino-3-phenylpropanamide
  • Phenylalaninamide
  • L-phenylalanine amide
  • Phenylalanylamide
Identifier
FormulaC9 H12 N2 O
Molecular Weight164.204
SMILES
PubChem445694
Formal Charge0
Total Atoms24
Total Chiral Atoms1
Total Bonds24
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP32239
Sequence
>7F8V_nogp_Chain_R
AIRITLYAV IFLMSVGGN MLIIVVLGL SRRLRTVTN AFLLSLAVS 
DLLLAVACM PFTLLPNLM GTFIFGTVI CKAVSYLMG VSVSVSTLS 
LVAIALERY SAICRPLQA RVWQTRSHA ARVIVATWL LSGLLMVPY 
PVYTVVQPV GPRVLQCVH RWPSARVRQ TWSVLLLLL LFFIPGVVM 
AVAYGLISR ELYLGLLAK KRVVRMLLV IVVLFFLCW LPVYSANTW 
RAFDGPGAH RALSGAPIS FIHLLSYAS ACVNPLVYC FMHRRFRQA 
CLETC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XOWAPeptideCholecystokininCCKBHomo sapiensGastrin-chim(NtGi1-Gq)/β1/γ23.12022-07-20doi.org/10.1038/s41421-022-00420-3
7XOW (No Gprot) APeptideCholecystokininCCKBHomo sapiensGastrin-3.12022-07-20doi.org/10.1038/s41421-022-00420-3
8IA7APeptideCholecystokininCCKBHomo sapiensCholecystokinin-8-chim(NtGi1L-Gq)/β1/γ23.12023-12-06doi.org/10.1038/s41421-022-00420-3
8IA7 (No Gprot) APeptideCholecystokininCCKBHomo sapiensCholecystokinin-8-3.12023-12-06doi.org/10.1038/s41421-022-00420-3
7F8VAPeptideCholecystokininCCKBHomo sapiensGastrin-17-Gi2/β1/γ23.32021-10-13doi.org/10.1038/s41589-021-00866-8
7F8V (No Gprot) APeptideCholecystokininCCKBHomo sapiensGastrin-17-3.32021-10-13doi.org/10.1038/s41589-021-00866-8
7F8WAPeptideCholecystokininCCKBHomo sapiensGastrin-17-chim(NtGsL-Gq)/β1/γ23.12021-10-13doi.org/10.1038/s41589-021-00866-8
7F8W (No Gprot) APeptideCholecystokininCCKBHomo sapiensGastrin-17-3.12021-10-13doi.org/10.1038/s41589-021-00866-8




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7F8V_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.