Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y61 7.55167617
2R:R:L69 3.465406
3R:R:N82 3.5325406
4R:R:M85 3.826508
5R:R:F92 3.6925408
6R:R:D100 7.205409
7R:R:C107 5407
8R:R:L108 7.9325417
9R:R:D115 5.6025415
10R:R:W120 8.31667637
11R:R:I130 2.6675405
12R:R:W153 7.368508
13R:R:M184 5.355407
14R:R:Q187 4.81426
15R:R:E212 7.56524
16R:R:W214 9.95667624
17R:R:Y223 8.25408
18R:R:Y232 6.0575408
19R:R:Y243 6.16409
20R:R:L250 2.536578
21R:R:F313 5.62449
22R:R:F333 5.195404
23R:R:F346 6.665404
24R:R:H350 5.37415
25R:R:Y354 6.132517
26R:R:I363 3.4975458
27R:R:Y364 6.035459
28R:R:F371 4.425408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:W351 R:R:Y61 10.25639.65NoYes057
2R:R:L112 R:R:Y61 15.223112.89NoYes067
3R:R:Y354 R:R:Y61 26.83064.96YesYes177
4R:R:F65 R:R:L108 13.52498.53NoYes067
5R:R:F65 R:R:L69 10.60323.65NoYes066
6R:R:C107 R:R:Y354 75.62244.03YesYes077
7R:R:C107 R:R:V103 1005.12YesNo077
8R:R:S357 R:R:V103 99.68966.46NoNo097
9R:R:D100 R:R:S357 99.56185.89YesNo099
10R:R:D100 R:R:N72 43.86766.73YesNo099
11R:R:N72 R:R:S97 41.48158.94NoNo099
12R:R:S97 R:R:V75 37.79293.23NoNo099
13R:R:N365 R:R:V75 36.54515.91NoNo079
14R:R:F371 R:R:N365 31.59056.04YesNo087
15R:R:F371 R:R:M85 27.6284.98YesYes088
16R:R:A78 R:R:M85 13.63441.61NoYes088
17R:R:A78 R:R:F375 12.16752.77NoNo087
18R:R:F375 R:R:L74 10.68842.44NoNo076
19R:R:D100 R:R:L96 78.37975.43YesNo099
20R:R:L145 R:R:L96 71.68425.54NoNo099
21R:R:L145 R:R:Y364 26.31328.21NoYes099
22R:R:I148 R:R:Y364 18.21786.04NoYes089
23R:R:F92 R:R:I148 17.52393.77YesNo088
24R:R:A169 R:R:F92 10.43282.77NoYes078
25R:R:L96 R:R:T144 13.30574.42NoNo097
26R:R:N95 R:R:T144 11.87535.85NoNo097
27R:R:D100 R:R:N360 10.846710.77YesNo099
28R:R:C107 R:R:Q134 47.36149.16YesNo077
29R:R:T111 R:R:Y354 30.76884.99NoYes177
30R:R:I116 R:R:L112 13.57962.85NoNo056
31R:R:I116 R:R:T117 11.9243.04NoNo055
32R:R:E118 R:R:Y343 13.08054.49NoNo043
33L:L:I6 R:R:Y343 14.66314.84NoNo003
34L:L:I6 R:R:F346 16.08747.54NoYes004
35R:R:F346 R:R:H350 40.98855.66YesYes045
36R:R:E118 R:R:R339 11.49196.98NoNo041
37L:L:L7 R:R:Q134 13.34236.65NoNo007
38L:L:L7 R:R:W120 12.02143.42NoYes007
39R:R:I130 R:R:Q134 38.18864.12YesNo057
40R:R:I130 R:R:P131 35.45563.39YesNo055
41R:R:M191 R:R:P131 34.59135.03NoNo065
42R:R:M191 R:R:Q187 14.74834.08NoYes266
43R:R:Q187 R:R:T135 16.51357.09YesNo066
44R:R:M184 R:R:T135 15.10749.03YesNo076
45R:R:F313 R:R:L145 48.43873.65YesNo099
46R:R:P235 R:R:V142 12.77623.53NoNo098
47R:R:M239 R:R:Y243 28.54713.59NoYes089
48R:R:F313 R:R:M239 41.6528.71YesNo098
49R:R:L306 R:R:Y243 27.71328.21NoYes089
50R:R:L306 R:R:T302 26.39842.95NoNo088
51R:R:L250 R:R:T302 25.21152.95YesNo088
52R:R:I246 R:R:L250 18.68042.85NoYes798
53R:R:C157 R:R:I246 17.37783.27NoNo079
54R:R:C157 R:R:W153 15.98397.84NoYes078
55R:R:F346 R:R:K327 29.52713.72YesNo043
56R:R:K327 R:R:R328 24.450718.56NoNo034
57R:R:H224 R:R:R328 14.504811.28NoNo064
58R:R:E212 R:R:M191 19.22824.06YesNo246
59R:R:E212 R:R:H224 13.67098.62YesNo046
60R:R:E212 R:R:W214 14.066614.17YesYes244
61L:L:G5 R:R:D211 12.9715.03NoNo005
62R:R:D211 R:R:R328 14.45019.53NoNo054
63L:L:G5 R:R:V209 11.37623.68NoNo005
64R:R:V353 R:R:Y354 22.14993.79NoYes077
65R:R:I320 R:R:V353 21.37074.61NoNo077
66R:R:I320 R:R:S349 28.55933.1NoNo076
67R:R:P319 R:R:S349 27.16543.56NoNo096
68R:R:L318 R:R:P319 22.91074.93NoNo069
69R:R:L318 R:R:Y232 20.01344.69NoYes068
70R:R:F228 R:R:Y232 14.07277.22NoYes068
71R:R:L310 R:R:M239 17.392.83NoNo088
72R:R:L310 R:R:M307 14.59012.83NoNo086
73R:R:F247 R:R:M307 11.74146.22NoNo066
74R:R:H350 R:R:T111 28.30365.48YesNo157
75R:R:L108 R:R:Y354 14.857912.89YesYes177
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:C107 R:R:Q134 9.16 0 Yes No 7 7 2 1
R:R:E118 R:R:R339 6.98 0 No No 4 1 2 1
R:R:E118 R:R:Y343 4.49 0 No No 4 3 2 1
R:R:F122 R:R:W120 15.03 0 No Yes 6 7 2 1
R:R:C127 R:R:W120 7.84 3 No Yes 9 7 2 1
R:R:C193 R:R:W120 3.92 3 No Yes 4 7 2 1
R:R:C210 R:R:W120 18.28 3 No Yes 9 7 2 1
L:L:L7 R:R:W120 3.42 0 No Yes 0 7 0 1
R:R:C127 R:R:C193 3.64 3 No No 9 4 2 2
R:R:C127 R:R:C210 7.28 3 No No 9 9 2 2
R:R:I130 R:R:Q134 4.12 0 Yes No 5 7 2 1
L:L:L7 R:R:Q134 6.65 0 No No 0 7 0 1
R:R:M184 R:R:T135 9.03 0 Yes No 7 6 2 2
R:R:Q187 R:R:T135 7.09 2 Yes No 6 6 1 2
L:L:M9 R:R:V138 7.61 0 No No 0 6 0 1
R:R:F227 R:R:M184 4.98 0 No Yes 5 7 1 2
R:R:M191 R:R:Q187 4.08 2 No Yes 6 6 2 1
R:R:E212 R:R:Q187 3.82 2 Yes Yes 4 6 2 1
L:L:T8 R:R:Q187 4.25 0 No Yes 0 6 0 1
R:R:E212 R:R:M191 4.06 2 Yes No 4 6 2 2
L:L:G5 R:R:V209 3.68 0 No No 0 5 0 1
R:R:D211 R:R:R328 9.53 0 No No 5 4 1 2
L:L:G5 R:R:D211 5.03 0 No No 0 5 0 1
R:R:F227 R:R:T231 7.78 0 No No 5 6 1 2
L:L:M9 R:R:F227 3.73 0 No No 0 5 0 1
R:R:F346 R:R:L323 9.74 0 Yes No 4 5 1 2
L:L:T8 R:R:N324 8.77 0 No No 0 7 0 1
R:R:K327 R:R:R328 18.56 0 No No 3 4 2 2
R:R:F333 R:R:K327 3.72 0 Yes No 4 3 1 2
R:R:F346 R:R:K327 3.72 0 Yes No 4 3 1 2
R:R:F333 R:R:V342 11.8 0 Yes No 4 5 1 2
R:R:A334 R:R:H335 4.39 0 No No 2 1 1 2
R:R:D338 R:R:T336 4.34 0 No No 3 4 2 1
L:L:H2 R:R:T336 6.85 0 No No 0 4 0 1
L:L:H2 R:R:R339 18.05 0 No No 0 1 0 1
L:L:I6 R:R:Y343 4.84 0 No No 0 3 0 1
R:R:F346 R:R:H350 5.66 0 Yes Yes 4 5 1 2
L:L:I6 R:R:F346 7.54 0 No Yes 0 4 0 1
L:L:A3 R:R:F333 2.77 0 No Yes 0 4 0 1
R:R:F333 R:R:M332 2.49 0 Yes No 4 3 1 2
L:L:A4 R:R:V209 1.7 0 No No 0 5 0 1
R:R:S194 R:R:V209 1.62 0 No No 3 5 2 1
L:L:N1 R:R:A334 1.56 0 No No 0 2 0 1
R:R:G123 R:R:W120 1.41 0 No Yes 8 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7L1U_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.1
Number of Linked Nodes 271
Number of Links 278
Number of Hubs 28
Number of Links mediated by Hubs 111
Number of Communities 7
Number of Nodes involved in Communities 29
Number of Links involved in Communities 34
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 32807
Length Of Smallest Path 3
Average Path Length 14.1432
Length of Longest Path 31
Minimum Path Strength 1.425
Average Path Strength 5.70803
Maximum Path Strength 19.92
Minimum Path Correlation 0.7
Average Path Correlation 0.930211
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.7037
Average % Of Corr. Nodes 52.035
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 31.8673
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO43614
Sequence
>7L1U_nogp_Chain_R
HPKEYEWVL IAGYIIVFV VALIGNVLV CVAVWKNHH MRTVTNYFI 
VNLSLADVL VTITCLPAT LVVDITETW FFGQSLCKV IPYLQTVSV 
SVSVLTLSC IALDRWYAI CHPLMFKST AKRARNSIV IIWIVSCII 
MIPQAIVME CSTVFFTVC DERWGGEIY PKMYHICFF LVTYMAPLC 
LMVLAYLQI FRKLWEIKQ IRARRKTAR MLMVVLLVF AICYLPISI 
LNVLKRVFG MFAHTEDRE TVYAWFTFS HWLVYANSA ANPIIYNFL 
SGKFREEFK AA


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XRRAPeptideOrexinOX2Homo sapiensLemborexant--2.892022-11-2310.1016/j.str.2022.11.001
7SR8APeptideOrexinOX2Homo sapiensTAK-925-chim(NtGi1L-Gs-CtGq)/β1/γ23.32022-06-0810.1038/s41467-022-30601-3
7SR8 (No Gprot) APeptideOrexinOX2Homo sapiensTAK-925-3.32022-06-0810.1038/s41467-022-30601-3
7SQOAPeptideOrexinOX2Homo sapiensTAK-925-Gi1/β1/γ23.172022-05-2510.1038/s41467-022-30601-3
7SQO (No Gprot) APeptideOrexinOX2Homo sapiensTAK-925-3.172022-05-2510.1038/s41467-022-30601-3
7L1VAPeptideOrexinOX2Homo sapiensPubChem 155491009-chim(NtGi1-Gs-CtGq)/β1/γ232021-02-1010.1038/s41467-021-21087-6
7L1V (No Gprot) APeptideOrexinOX2Homo sapiensPubChem 155491009-32021-02-1010.1038/s41467-021-21087-6
7L1UAPeptideOrexinOX2Homo sapiensOrexin-chim(NtGi1-Gs-CtGq)/β1/γ23.22021-02-1010.1038/s41467-021-21087-6
7L1U (No Gprot) APeptideOrexinOX2Homo sapiensOrexin-3.22021-02-1010.1038/s41467-021-21087-6
6TPNAPeptideOrexinOX2Homo sapiensHTL6641--2.612020-01-0110.1021/acs.jmedchem.9b01787
6TPJAPeptideOrexinOX2Homo sapiensSuvorexant--2.742020-01-0110.1021/acs.jmedchem.9b01787
6TPGAPeptideOrexinOX2Homo sapiensEMPA--2.742020-01-0110.1021/acs.jmedchem.9b01787
5WS3APeptideOrexinOX2Homo sapiensEMPA--2.32017-12-1310.1016/j.str.2017.11.005
5WQCAPeptideOrexinOX2Homo sapiensEMPA--1.962017-11-2910.1016/j.str.2017.11.005
4S0VAPeptideOrexinOX2Homo sapiensSuvorexant--2.52015-01-1410.1038/nature14035




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7L1U_nogp.zip



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