Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.086510
2L:L:H2 7.1525810
3L:L:V5 7.4475410
4L:L:T16 2.325400
5L:L:Y27 11.594520
6L:L:R37 6.005400
7L:L:I40 5.51754100
8L:L:F49 7.575420
9L:L:W57 10.37400
10R:R:Y16 5.575425
11R:R:P22 3.5454103
12R:R:T36 3.0975485
13R:R:V54 4.6025409
14R:R:S67 4.22466
15R:R:V70 4.0225416
16R:R:Y71 8.5475467
17R:R:N74 8.0125419
18R:R:D79 7.2325419
19R:R:F82 6.025417
20R:R:W89 8.42617
21R:R:Y92 7.685616
22R:R:V102 5.0875403
23R:R:F111 8.584517
24R:R:Y112 11.375415
25R:R:F116 5.4325417
26R:R:F121 7.628517
27R:R:Y130 8.645648
28R:R:V134 5.864547
29R:R:Y135 5.7925446
30R:R:R139 7.6125467
31R:R:W151 8.75406
32R:R:W152 5.638519
33R:R:I158 5.2625405
34R:R:H162 9.2514
35R:R:V165 5.0175475
36R:R:V166 4.43415
37R:R:Q172 5.9075413
38R:R:M174 3.78404
39R:R:L180 5.9775473
40R:R:Y184 5.88674
41R:R:M193 3.66615
42R:R:F197 8.255419
43R:R:L201 4.575416
44R:R:Y208 6.4475438
45R:R:R210 5.4325443
46R:R:L230 4.6025407
47R:R:F237 6.2825419
48R:R:F240 5.055407
49R:R:W241 7.94857718
50R:R:Y244 9.61616
51R:R:H245 10.1125418
52R:R:E277 8.655416
53R:R:F281 6.78517
54R:R:H283 8.32419
55R:R:N287 6.31419
56R:R:Y291 5.982539
57R:R:F293 4.002557
58R:R:F298 5.1125438
59R:R:L305 3.9525454
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 L:L:H2 18.45285.5YesYes100
2L:L:H2 L:L:V5 48.800313.84YesYes100
3L:L:H2 R:R:Y40 14.93024.36YesNo107
4L:L:H2 R:R:W89 44.59447.41YesYes107
5R:R:F111 R:R:Y112 17.206910.32YesYes175
6L:L:H2 R:R:E277 92.52833.69YesYes106
7L:L:H3 R:R:E277 16.64063.69NoYes006
8L:L:H3 R:R:K270 13.4546.55NoNo004
9L:L:V5 R:R:Y92 42.7016.31YesYes106
10R:R:W89 R:R:Y92 54.92997.72YesYes176
11L:L:V5 R:R:L93 10.58655.96YesNo006
12R:R:Q172 R:R:Y92 90.31584.51YesYes136
13L:L:S33 R:R:Q172 85.85885.78NoYes003
14L:L:C8 L:L:S33 84.70161.72NoNo000
15L:L:C8 L:L:N30 82.25511.57NoNo900
16L:L:N30 L:L:R37 81.207412.05NoYes000
17L:L:P53 L:L:R37 71.72334.32NoYes000
18L:L:I39 L:L:P53 68.10451.69NoNo000
19L:L:I39 L:L:Y27 65.571116.92NoYes200
20L:L:L41 L:L:Y27 47.409114.07NoYes200
21L:L:F49 L:L:L41 46.94476.09YesNo200
22L:L:F49 L:L:R47 39.080312.83YesNo200
23L:L:R47 R:R:T21 37.93445.17NoNo003
24R:R:P22 R:R:T21 36.63191.75YesNo033
25R:R:F25 R:R:K270 11.04154.96NoNo034
26L:L:C50 R:R:P22 16.61415.65NoYes003
27L:L:C50 L:L:T16 11.14341.69NoYes000
28L:L:L24 L:L:Y27 15.806212.89NoYes200
29L:L:A61 L:L:L24 15.26061.58NoNo000
30L:L:A61 L:L:H64 13.8922.93NoNo000
31L:L:H64 L:L:V21 11.14342.77NoNo000
32R:R:L86 R:R:Y40 21.103210.55NoNo087
33R:R:L86 R:R:V43 13.06142.98NoNo087
34R:R:E277 R:R:Y244 10019.08YesYes166
35R:R:W241 R:R:Y244 54.18993.86YesYes186
36R:R:H283 R:R:W241 13.427615.87YesYes198
37R:R:H283 R:R:N287 18.39993.83YesYes199
38R:R:F237 R:R:W241 41.26068.02YesYes198
39R:R:F237 R:R:L201 49.05716.09YesYes196
40R:R:I204 R:R:L201 90.85192.85NoYes076
41R:R:I122 R:R:I204 55.09792.94NoNo087
42R:R:I122 R:R:Y291 53.93319.67NoYes089
43R:R:I125 R:R:Y291 48.29256.04NoYes389
44R:R:F72 R:R:I125 48.80416.28NoNo388
45R:R:F72 R:R:V292 30.73075.24NoNo387
46R:R:V292 R:R:V54 29.51138.02NoYes079
47R:R:I58 R:R:V54 10.08633.07NoYes069
48R:R:I73 R:R:T59 14.18461.52NoNo052
49R:R:H245 R:R:Y244 49.08169.8YesYes186
50R:R:F197 R:R:H245 45.830920.36YesYes198
51R:R:F197 R:R:L201 43.79783.65YesYes196
52R:R:F298 R:R:F72 16.74825.36YesNo388
53R:R:D69 R:R:F298 14.0943.58NoYes088
54R:R:F293 R:R:V54 17.1883.93YesYes079
55R:R:F293 R:R:T57 11.50213.89YesNo576
56R:R:L305 R:R:T57 10.09382.95YesNo546
57R:R:F116 R:R:Y112 17.99974.13YesYes175
58R:R:F116 R:R:I158 21.414710.05YesYes075
59R:R:F154 R:R:I158 22.46993.77NoYes045
60R:R:F154 R:R:W151 22.00376.01NoYes046
61R:R:E124 R:R:W151 16.544317.45NoYes066
62R:R:E124 R:R:Y71 10.960317.96NoYes067
63R:R:F121 R:R:W151 13.41255.01YesYes076
64R:R:L75 R:R:N287 12.84624.12NoYes199
65R:R:F121 R:R:L75 12.75563.65YesNo179
66R:R:A126 R:R:I204 34.60823.25NoNo097
67R:R:A126 R:R:Y208 33.5195.34NoYes098
68R:R:L230 R:R:Y208 34.43078.21YesYes078
69R:R:I211 R:R:L230 26.02652.85NoYes087
70R:R:I211 R:R:V134 21.74323.07NoYes087
71R:R:H162 R:R:L188 10.816811.57YesNo045
72R:R:H162 R:R:L192 15.44565.14YesNo145
73L:L:?1 R:R:T175 19.91774.73YesNo005
74R:R:T175 R:R:Y177 11.683312.48NoNo055
75R:R:H245 R:R:M193 11.33033.94YesYes185
76R:R:F249 R:R:M193 12.4463.73NoYes055
77R:R:F249 R:R:L253 11.10196.09NoNo054
78R:R:L255 R:R:P185 11.15661.64NoNo043
79R:R:L192 R:R:Y244 13.97884.69NoYes156
80R:R:F111 R:R:W89 11.21144.01YesYes177
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:T108 7.88 1 Yes No 0 6 0 1
L:L:?1 R:R:Y112 12.54 1 Yes Yes 0 5 0 1
L:L:?1 R:R:V166 4.78 1 Yes Yes 0 5 0 1
L:L:?1 R:R:T175 4.73 1 Yes No 0 5 0 1
L:L:H2 R:R:Y40 4.36 1 Yes No 0 7 0 1
L:L:H2 R:R:W89 7.41 1 Yes Yes 0 7 0 1
L:L:H2 R:R:F111 13.58 1 Yes Yes 0 7 0 1
L:L:H2 R:R:E277 3.69 1 Yes Yes 0 6 0 1
L:L:H2 R:R:F281 5.66 1 Yes Yes 0 7 0 1
L:L:H3 R:R:K270 6.55 0 No No 0 4 0 1
L:L:H3 R:R:L273 12.86 0 No No 0 5 0 1
L:L:H3 R:R:E277 3.69 0 No Yes 0 6 0 1
L:L:G4 R:R:I274 5.29 0 No No 0 5 0 1
L:L:V5 R:R:W89 3.68 1 Yes Yes 0 7 0 1
L:L:V5 R:R:Y92 6.31 1 Yes Yes 0 6 0 1
L:L:V5 R:R:L93 5.96 1 Yes No 0 6 0 1
L:L:T6 R:R:K270 6.01 0 No No 0 4 0 1
L:L:K7 R:R:Y92 11.94 1 No Yes 0 6 0 1
L:L:K7 R:R:Q172 5.42 1 No Yes 0 3 0 1
L:L:N9 R:R:L29 4.12 0 No No 0 3 0 1
L:L:I10 R:R:P22 3.39 10 No Yes 0 3 0 1
L:L:I10 R:R:V24 4.61 10 No No 0 2 0 1
L:L:T11 R:R:F25 5.19 0 No No 0 3 0 1
L:L:T16 R:R:D17 2.89 0 Yes No 0 5 0 1
L:L:A32 R:R:M174 3.22 0 No Yes 0 4 0 1
L:L:S33 R:R:Q172 5.78 0 No Yes 0 3 0 1
L:L:I40 R:R:P22 3.39 10 Yes Yes 0 3 0 1
L:L:R47 R:R:Y16 8.23 2 No Yes 0 5 0 1
L:L:R47 R:R:T21 5.17 2 No No 0 3 0 1
L:L:F49 R:R:Y16 6.19 2 Yes Yes 0 5 0 1
L:L:C50 R:R:P22 5.65 0 No Yes 0 3 0 1
R:R:E18 R:R:Y16 6.73 0 No Yes 3 5 2 1
R:R:D17 R:R:D19 5.32 0 No No 5 4 1 1
R:R:T26 R:R:V24 3.17 0 No No 4 2 2 1
R:R:F25 R:R:V28 5.24 0 No No 3 4 1 2
R:R:F25 R:R:K270 4.96 0 No No 3 4 1 1
R:R:N30 R:R:T26 4.39 0 No No 4 4 2 2
R:R:S32 R:R:T36 4.8 8 No Yes 3 5 2 2
R:R:I274 R:R:S32 7.74 8 No No 5 3 1 2
R:R:K33 R:R:L93 9.87 0 No No 4 6 2 1
R:R:L93 R:R:T36 2.95 0 No Yes 6 5 1 2
R:R:I274 R:R:T36 3.04 8 No Yes 5 5 1 2
R:R:L86 R:R:Y40 10.55 0 No No 8 7 2 1
R:R:F281 R:R:Y40 7.22 1 Yes No 7 7 1 1
R:R:F111 R:R:F82 9.65 1 Yes Yes 7 7 1 2
R:R:F281 R:R:F82 7.5 1 Yes Yes 7 7 1 2
R:R:W89 R:R:Y92 7.72 1 Yes Yes 7 6 1 1
R:R:L107 R:R:W89 21.64 0 No Yes 5 7 2 1
R:R:T108 R:R:W89 6.06 1 No Yes 6 7 1 1
R:R:F111 R:R:W89 4.01 1 Yes Yes 7 7 1 1
R:R:V102 R:R:Y92 7.57 0 Yes Yes 3 6 2 1
R:R:Q172 R:R:Y92 4.51 1 Yes Yes 3 6 1 1
R:R:C173 R:R:Y92 8.06 0 No Yes 9 6 2 1
R:R:T108 R:R:V166 7.93 1 No Yes 6 5 1 1
R:R:F111 R:R:Y112 10.32 1 Yes Yes 7 5 1 1
R:R:F111 R:R:F281 5.36 1 Yes Yes 7 7 1 1
R:R:F116 R:R:Y112 4.13 1 Yes Yes 7 5 2 1
R:R:H162 R:R:Y112 18.51 1 Yes Yes 4 5 2 1
R:R:F116 R:R:H162 3.39 1 Yes Yes 7 4 2 2
R:R:T175 R:R:V165 4.76 0 No Yes 5 5 1 2
R:R:C173 R:R:V166 3.42 0 No Yes 9 5 2 1
R:R:K169 R:R:M174 8.64 0 No Yes 3 4 2 1
R:R:N171 R:R:Q172 7.92 0 No Yes 5 3 2 1
R:R:T175 R:R:Y177 12.48 0 No No 5 5 1 2
R:R:E277 R:R:Y244 19.08 1 Yes Yes 6 6 1 2
R:R:L273 R:R:T247 2.95 0 No No 5 5 1 2
R:R:E277 R:R:F281 8.16 1 Yes Yes 6 7 1 1
L:L:K14 R:R:D19 2.77 0 No No 0 4 0 1
L:L:G35 R:R:M174 1.75 0 No Yes 0 4 0 1
R:R:P22 R:R:T21 1.75 10 Yes No 3 3 1 1
L:L:T16 R:R:A20 1.68 0 Yes No 0 4 0 1
R:R:T105 R:R:V166 1.59 0 No Yes 8 5 2 1
R:R:M174 R:R:T167 1.51 0 Yes No 4 4 1 2
R:R:L29 R:R:N30 1.37 0 No No 3 4 1 2
R:R:D15 R:R:Y16 1.15 0 No Yes 4 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7RKM_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 337
Number of Links 389
Number of Hubs 59
Number of Links mediated by Hubs 207
Number of Communities 11
Number of Nodes involved in Communities 87
Number of Links involved in Communities 121
Path Summary
Number Of Nodes in MetaPath 81
Number Of Links MetaPath 80
Number of Shortest Paths 113630
Length Of Smallest Path 3
Average Path Length 17.3237
Length of Longest Path 41
Minimum Path Strength 1.1
Average Path Strength 6.61394
Maximum Path Strength 19.235
Minimum Path Correlation 0.7
Average Path Correlation 0.951423
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 55.7263
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 50.2125
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • CX3C chemokine receptor binding   • signaling receptor binding   • cytokine receptor binding   • G protein-coupled receptor binding   • chemokine receptor binding   • CCR chemokine receptor binding   • molecular transducer activity   • molecular function activator activity   • signaling receptor activity   • signaling receptor activator activity   • chemokine activity   • molecular function regulator activity   • cytokine activity   • signaling receptor regulator activity   • receptor ligand activity   • CXCR1 chemokine receptor binding   • interleukin-8 receptor binding   • CXCR chemokine receptor binding   • cell adhesion molecule binding   • integrin binding   • chemoattractant activity   • cell surface receptor signaling pathway   • response to cytokine   • cytokine-mediated signaling pathway   • response to peptide   • cellular response to cytokine stimulus   • regulation of multicellular organismal development   • regulation of developmental process   • cellular developmental process   • cell development   • regulation of neurogenesis   • regulation of cell differentiation   • nervous system development   • regulation of cell development   • regulation of nervous system development   • neurogenesis   • cell differentiation   • regulation of multicellular organismal process   • regulation of tumor necrosis factor production   • negative regulation of biological process   • negative regulation of tumor necrosis factor production   • cytokine production   • regulation of cytokine production   • negative regulation of cellular process   • negative regulation of macromolecule metabolic process   • regulation of biosynthetic process   • negative regulation of metabolic process   • tumor necrosis factor superfamily cytokine production   • negative regulation of cytokine production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • tumor necrosis factor production   • regulation of gene expression   • negative regulation of gene expression   • regulation of tumor necrosis factor superfamily cytokine production   • biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • negative regulation of tumor necrosis factor superfamily cytokine production   • metabolic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • negative regulation of multicellular organismal process   • regulation of metabolic process   • regulation of defense response   • regulation of response to external stimulus   • defense response   • positive regulation of biological process   • response to external stimulus   • regulation of inflammatory response   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of inflammatory response   • regulation of response to stimulus   • regulation of response to stress   • response to stress   • positive regulation of defense response   • inflammatory response   • positive regulation of locomotion   • regulation of cell motility   • regulation of microglial cell migration   • glial cell migration   • macrophage migration   • regulation of glial cell migration   • positive regulation of cell migration   • regulation of macrophage migration   • gliogenesis   • positive regulation of cell motility   • regulation of cell migration   • myeloid leukocyte migration   • positive regulation of mononuclear cell migration   • positive regulation of microglial cell migration   • cell migration   • regulation of immune system process   • regulation of mononuclear cell migration   • cell motility   • positive regulation of immune system process   • locomotion   • positive regulation of cellular process   • positive regulation of macrophage migration   • regulation of leukocyte migration   • microglial cell migration   • positive regulation of leukocyte migration   • leukocyte migration   • positive regulation of glial cell migration   • immune system process   • regulation of locomotion   • mononuclear cell migration   • cellular component organization   • cellular component biogenesis   • cellular component assembly   • protein-containing complex organization   • protein-containing complex assembly   • integrin activation   • cellular component organization or biogenesis   • interleukin-6 production   • regulation of interleukin-6 production   • negative regulation of interleukin-6 production   • developmental maturation   • generation of neurons   • neuron differentiation   • neuron remodeling   • anatomical structure maturation   • neuron development   • neuron maturation   • cell maturation   • regulation of cell-substrate adhesion   • positive regulation of cell adhesion   • regulation of cell adhesion   • cell-substrate adhesion   • positive regulation of cell-matrix adhesion   • cell adhesion   • cell-matrix adhesion   • positive regulation of cell-substrate adhesion   • regulation of cell-matrix adhesion   • response to ischemia   • cell chemotaxis   • chemotaxis   • neutrophil chemotaxis   • neutrophil migration   • granulocyte migration   • taxis   • granulocyte chemotaxis   • leukocyte chemotaxis   • positive chemotaxis   • leukocyte migration involved in inflammatory response   • autocrine signaling   • regulation of neuron projection development   • regulation of cellular component organization   • positive regulation of cellular component organization   • cell projection organization   • neuron projection development   • positive regulation of neuron projection development   • positive regulation of cell projection organization   • plasma membrane bounded cell projection organization   • regulation of cell projection organization   • regulation of plasma membrane bounded cell projection organization   • signal transduction in absence of ligand   • cell death   • extrinsic apoptotic signaling pathway   • apoptotic signaling pathway   • extrinsic apoptotic signaling pathway in absence of ligand   • apoptotic process   • programmed cell death   • negative regulation of locomotion   • negative regulation of cell motility   • negative regulation of cell migration   • regulation of smooth muscle cell proliferation   • positive regulation of cell population proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • regulation of cell population proliferation   • muscle cell proliferation   • eosinophil chemotaxis   • eosinophil migration   • lymphocyte chemotaxis   • lymphocyte migration   • wound healing   • blood vessel morphogenesis   • tube development   • angiogenesis involved in wound healing   • angiogenesis   • vasculature development   • circulatory system development   • anatomical structure morphogenesis   • tube morphogenesis   • anatomical structure formation involved in morphogenesis   • response to wounding   • blood vessel development   • positive regulation of DNA-templated transcription   • RNA metabolic process   • positive regulation of macromolecule biosynthetic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • positive regulation of metabolic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of transcription by RNA polymerase II   • positive regulation of nucleobase-containing compound metabolic process   • primary metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • positive regulation of RNA biosynthetic process   • regulation of DNA-templated transcription   • cell activation   • myeloid leukocyte activation   • leukocyte activation   • macrophage activation   • leukocyte activation involved in inflammatory response   • microglial cell activation   • glial cell activation   • neuroinflammatory response   • cellular homeostasis   • neuron cellular homeostasis   • homeostatic process   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of canonical NF-kappaB signal transduction   • regulation of signal transduction   • regulation of intracellular signal transduction   • regulation of signaling   • positive regulation of intracellular signal transduction   • canonical NF-kappaB signal transduction   • regulation of cell communication   • regulation of canonical NF-kappaB signal transduction   • positive regulation of signaling   • negative regulation of extrinsic apoptotic signaling pathway in absence of ligand   • negative regulation of signaling   • regulation of programmed cell death   • negative regulation of cell communication   • negative regulation of signal transduction in absence of ligand   • negative regulation of extrinsic apoptotic signaling pathway   • negative regulation of apoptotic signaling pathway   • negative regulation of response to stimulus   • negative regulation of programmed cell death   • regulation of apoptotic process   • negative regulation of signal transduction   • regulation of extrinsic apoptotic signaling pathway   • negative regulation of apoptotic process   • regulation of extrinsic apoptotic signaling pathway in absence of ligand   • regulation of apoptotic signaling pathway   • positive regulation of ERK1 and ERK2 cascade   • positive regulation of MAPK cascade   • regulation of MAPK cascade   • MAPK cascade   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • immune response   • regulation of macrophage activation   • negative regulation of inflammatory response   • regulation of leukocyte activation   • regulation of cell activation   • regulation of neuroinflammatory response   • negative regulation of microglial cell activation   • negative regulation of cell activation   • negative regulation of immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of microglial cell activation   • negative regulation of neuroinflammatory response   • negative regulation of leukocyte activation   • negative regulation of macrophage activation   • regulation of transforming growth factor beta production   • transforming growth factor beta1 production   • regulation of transforming growth factor beta1 production   • positive regulation of transforming growth factor beta1 production   • transforming growth factor beta production   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • positive regulation of transforming growth factor beta production   • positive regulation of cytokine production   • response to chemokine   • cellular response to chemokine   • chemokine-mediated signaling pathway   • interleukin-1 production   • regulation of interleukin-1 beta production   • negative regulation of interleukin-1 beta production   • negative regulation of interleukin-1 production   • regulation of interleukin-1 production   • interleukin-1 beta production   • regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction   • phosphatidylinositol 3-kinase/protein kinase B signal transduction   • regulation of lipopolysaccharide-mediated signaling pathway   • regulation of response to biotic stimulus   • biological process involved in interspecies interaction between organisms   • cellular response to lipopolysaccharide   • response to biotic stimulus   • lipopolysaccharide-mediated signaling pathway   • cellular response to biotic stimulus   • response to bacterium   • response to external biotic stimulus   • response to other organism   • cellular response to molecule of bacterial origin   • response to lipopolysaccharide   • response to molecule of bacterial origin   • negative regulation of interleukin-1 alpha production   • regulation of interleukin-1 alpha production   • interleukin-1 alpha production   • cellular component disassembly   • cell junction organization   • cell junction disassembly   • synapse pruning   • synapse organization   • positive regulation of organelle organization   • regulation of cytoskeleton organization   • regulation of actin filament-based process   • regulation of actin filament bundle assembly   • positive regulation of actin filament bundle assembly   • actin filament bundle organization   • actin filament-based process   • regulation of actin filament organization   • actin cytoskeleton organization   • positive regulation of cellular component biogenesis   • positive regulation of cytoskeleton organization   • actin filament organization   • positive regulation of supramolecular fiber organization   • regulation of cellular component biogenesis   • regulation of organelle organization   • organelle organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • leukocyte adhesive activation   • cellular extravasation   • regulation of vasculature development   • positive regulation of developmental process   • regulation of anatomical structure morphogenesis   • positive regulation of angiogenesis   • positive regulation of vasculature development   • regulation of angiogenesis   • humoral immune response   • defense response to symbiont   • antimicrobial humoral response   • antimicrobial humoral immune response mediated by antimicrobial peptide   • defense response to other organism   • regulation of calcium-independent cell-cell adhesion   • positive regulation of cell-cell adhesion   • cell-cell adhesion   • calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules   • regulation of cell-cell adhesion   • cell-cell adhesion via plasma-membrane adhesion molecules   • positive regulation of calcium-independent cell-cell adhesion   • negative regulation of cell adhesion   • negative regulation of cell-substrate adhesion   • macrophage chemotaxis   • regulation of synaptic plasticity   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • chemical synaptic transmission   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • regulation of biological quality   • microglial cell proliferation   • leukocyte proliferation   • macrophage proliferation   • glial cell proliferation   • regulation of calcium ion transport   • regulation of localization   • positive regulation of cation transmembrane transport   • positive regulation of calcium ion transport   • intracellular calcium ion homeostasis   • calcium ion transport   • localization   • positive regulation of monoatomic ion transport   • positive regulation of monoatomic ion transmembrane transport   • monoatomic cation homeostasis   • monoatomic cation transport   • intracellular monoatomic ion homeostasis   • regulation of release of sequestered calcium ion into cytosol   • regulation of monoatomic ion transport   • inorganic ion transmembrane transport   • establishment of localization   • inorganic cation transmembrane transport   • maintenance of location   • transmembrane transport   • release of sequestered calcium ion into cytosol   • regulation of transmembrane transport   • chemical homeostasis   • cellular localization   • inorganic ion homeostasis   • transport   • monoatomic ion transmembrane transport   • calcium ion homeostasis   • regulation of monoatomic ion transmembrane transport   • negative regulation of sequestering of calcium ion   • metal ion transport   • maintenance of location in cell   • regulation of calcium ion transmembrane transport   • monoatomic cation transmembrane transport   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • positive regulation of calcium ion transmembrane transport   • positive regulation of transmembrane transport   • monoatomic ion transport   • intracellular chemical homeostasis   • positive regulation of release of sequestered calcium ion into cytosol   • regulation of metal ion transport   • regulation of sequestering of calcium ion   • calcium ion transmembrane import into cytosol   • regulation of transport   • sequestering of calcium ion   • positive regulation of transport   • regulation of monoatomic cation transmembrane transport   • calcium ion transmembrane transport   • negative regulation of neuron migration   • regulation of neuron migration   • neuron migration   • glutamate receptor signaling pathway   • negative regulation of glutamate receptor signaling pathway   • regulation of glutamate receptor signaling pathway   • neuron apoptotic process   • negative regulation of neuron apoptotic process   • hippocampal neuron apoptotic process   • regulation of hippocampal neuron apoptotic process   • negative regulation of hippocampal neuron apoptotic process   • regulation of neuron apoptotic process   • neuroblast proliferation   • positive regulation of nervous system development   • regulation of neuroblast proliferation   • positive regulation of cell differentiation   • positive regulation of neurogenesis   • regulation of neural precursor cell proliferation   • positive regulation of cell development   • positive regulation of neural precursor cell proliferation   • positive regulation of neuroblast proliferation   • neural precursor cell proliferation   • perinuclear region of cytoplasm   • somatodendritic compartment   • cell body   • neuronal cell body   • cell surface   • G protein-coupled chemoattractant receptor activity   • C-C chemokine receptor activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • C-C chemokine binding   • chemokine binding   • cytokine binding   • positive regulation of cytosolic calcium ion concentration   • calcium-mediated signaling   • symbiont-mediated perturbation of host cellular process   • symbiont-mediated perturbation of host process   • symbiont-mediated transformation of host cell   • modulation of process of another organism   • biological process involved in interaction with host   • biological process involved in symbiotic interaction   • host cell plasma membrane   • host cellular component   • host cell part   • host cell membrane
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines   • G protein-coupled receptor-like
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodePCA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodePCA
NamePidolic acid
Synonyms5-Pyrrolidone-2-carboxylic acid
Identifier
FormulaC5 H7 N O3
Molecular Weight129.114
SMILES
PubChem7405
Formal Charge0
Total Atoms16
Total Chiral Atoms1
Total Bonds16
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP69332
Sequence
>7RKM_nogp_Chain_R
DYDEDATPC VFTDVLNQS KPVTLFLYG VVFLFGSIG NFLVIFTIT 
WRRRIQCSG DVYFINLAA ADLLFVCTL PLWMQYLLD HNSLASVPC 
TLLTACFYV AMFASLCFI TEIALDRYY AIVYMRYRP VKQACLFSI 
FWWIFAVII AIPHFMVVT KKDNQCMTD YDYLEVSYP IILNVELML 
GAFVIPLSV ISYCYYRIS RIVAVSQSR HKGRIVRVL IAVVLVFII 
FWLPYHLTL FVDTLKLLK WISSSCEFE RSLKRALIL TESLAFCHC 
CLNPLLYVF VGTKFRQEL HCLLAE


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7RKFAOtherUnclassifiedUS28Human betaherpesvirus 5FractalkineGDPchim(NtGi1-G11)/β1/γ242022-01-2610.1126/sciadv.abl5442
7RKF (No Gprot) AOtherUnclassifiedUS28Human betaherpesvirus 5FractalkineGDP42022-01-2610.1126/sciadv.abl5442
7RKNAOtherUnclassifiedUS28Human betaherpesvirus 5Fractalkine-Gi1/β1/γ23.62022-01-2610.1126/sciadv.abl5442
7RKN (No Gprot) AOtherUnclassifiedUS28Human betaherpesvirus 5Fractalkine-3.62022-01-2610.1126/sciadv.abl5442
7RKMAOtherUnclassifiedUS28Human betaherpesvirus 5Fractalkine-Gi1/β1/γ23.52022-01-2610.1126/sciadv.abl5442
7RKM (No Gprot) AOtherUnclassifiedUS28Human betaherpesvirus 5Fractalkine-3.52022-01-2610.1126/sciadv.abl5442
5WB2AOtherUnclassifiedUS28Human cytomegalovirus (strain towne)CX3CL1.35--3.52018-06-1310.7554/eLife.35850
5WB1AOtherUnclassifiedUS28Human cytomegalovirus (strain towne)---3.512018-06-1310.7554/eLife.35850
4XT3AOtherUnclassifiedUS28Human cytomegalovirus (strain ad169)Fractalkine--3.82015-03-0410.1126/science.aaa5026
4XT1AOtherUnclassifiedUS28Human cytomegalovirus (strain ad169)Fractalkine--2.892015-03-0410.1126/science.aaa5026




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