Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.2291010
2R:R:I52 7.8525415
3R:R:Y56 6.778517
4R:R:N67 6.11439
5R:R:M71 3.96427
6R:R:I86 2.245426
7R:R:N90 6.8525429
8R:R:D95 8.7875439
9R:R:T101 5.686517
10R:R:W114 3.74667648
11R:R:F116 8.4407
12R:R:L120 7.9075446
13R:R:Y130 4.734525
14R:R:T134 3.6225428
15R:R:I136 3.8675437
16R:R:Y147 6.3275408
17R:R:N169 6.3325427
18R:R:I172 2.19426
19R:R:W173 4.05333629
20R:R:F202 6.6375496
21R:R:S204 5.6725494
22R:R:P225 2.59408
23R:R:I226 4.255406
24R:R:I229 4.2925468
25R:R:Y233 4.626568
26R:R:M236 4.7725468
27R:R:L246 5.2754102
28R:R:L256 3.43406
29R:R:V263 3.6375407
30R:R:W274 10.62738
31R:R:H301 6.94833614
32R:R:I304 4.8725415
33R:R:Y308 10.07417
34R:R:N310 13.2825439
35R:R:S312 2.888577
36R:R:F325 7.29458
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:L300 64.793110.17YesNo105
2R:R:H301 R:R:L300 62.89292.57YesNo145
3R:R:H301 R:R:Y56 77.73043.27YesYes147
4R:R:I52 R:R:Y56 34.603115.71YesYes157
5L:L:?1 R:R:I304 69.15298.06YesYes105
6R:R:H301 R:R:I304 64.582.65YesYes145
7R:R:I52 R:R:L48 14.93525.71YesNo052
8R:R:I52 R:R:L302 14.94414.28YesNo055
9R:R:S106 R:R:Y56 29.77272.54NoYes067
10L:L:?1 R:R:M132 99.644811.18YesNo008
11R:R:M132 R:R:W274 1003.49NoYes088
12R:R:N314 R:R:W274 57.929310.17NoYes398
13R:R:N314 R:R:P315 57.91164.89NoNo399
14R:R:D95 R:R:P315 29.293212.88YesNo399
15R:R:D95 R:R:S311 21.21297.36YesNo099
16R:R:S311 R:R:S312 17.11061.63NoYes097
17L:L:?1 R:R:Y308 57.59197.29YesYes107
18R:R:N67 R:R:P315 26.92244.89YesNo399
19R:R:N67 R:R:V70 24.82692.96YesNo098
20R:R:I74 R:R:V70 22.82013.07NoNo078
21L:L:?1 R:R:D128 52.006811.5YesNo105
22R:R:D128 R:R:T101 50.879110.12NoYes157
23R:R:N131 R:R:T101 94.37044.39NoYes087
24R:R:L97 R:R:N131 36.33469.61NoNo078
25R:R:L97 R:R:W173 35.79292.28NoYes079
26R:R:L93 R:R:W173 41.66222.28NoYes269
27R:R:L93 R:R:M71 32.56084.24NoYes267
28R:R:T101 R:R:Y308 52.61946.24YesYes177
29R:R:N131 R:R:Y130 56.23342.33NoYes085
30R:R:W173 R:R:Y130 37.2584.82YesYes295
31R:R:M71 R:R:V75 24.27633.04YesNo073
32R:R:N90 R:R:W173 17.98976.78YesYes299
33R:R:F325 R:R:I74 18.66456.28YesNo587
34R:R:D322 R:R:F325 12.608814.33NoYes588
35R:R:D322 R:R:T84 10.6021.45NoNo088
36R:R:N169 R:R:W173 27.95244.52YesYes279
37R:R:I86 R:R:N169 20.68022.83YesYes267
38R:R:A83 R:R:I86 11.17031.62NoYes256
39R:R:I136 R:R:W274 42.61237.05YesYes378
40R:R:F137 R:R:I136 31.05131.26NoYes067
41R:R:F137 R:R:I172 28.7961.26NoYes066
42R:R:I172 R:R:M141 10.94832.92YesNo267
43R:R:A83 R:R:Y87 14.38472.67NoNo257
44R:R:I168 R:R:I172 10.94832.94NoYes256
45R:R:S135 R:R:W274 33.12912.47NoYes098
46R:R:A94 R:R:S135 31.57521.71NoNo089
47R:R:A94 R:R:T134 30.12791.68NoYes088
48L:L:?1 R:R:Y129 58.355517.22YesNo005
49R:R:I183 R:R:Y129 55.98473.63NoNo045
50R:R:I183 R:R:L200 53.70271.43NoNo044
51R:R:L125 R:R:L200 51.15431.38NoNo054
52R:R:C198 R:R:L125 48.57936.35NoNo095
53R:R:C198 R:R:W114 37.79083.92NoYes498
54R:R:F116 R:R:W114 19.5172YesYes078
55R:R:V124 R:R:W114 10.91287.36NoYes458
56R:R:A107 R:R:S106 24.85351.71NoNo036
57R:R:H301 R:R:V297 34.17695.54YesNo144
58R:R:A107 R:R:L110 19.91651.58NoNo034
59R:R:L110 R:R:M111 14.96185.65NoNo044
60R:R:S177 R:R:Y130 15.17496.36NoYes045
61R:R:A176 R:R:F133 12.45781.39NoNo087
62R:R:I136 R:R:P225 34.74523.39YesYes078
63R:R:F270 R:R:W274 61.676413.03NoYes398
64R:R:F270 R:R:I226 67.2355.02NoYes096
65R:R:I226 R:R:T230 76.45181.52YesNo064
66R:R:I229 R:R:T230 74.75581.52YesNo084
67R:R:I229 R:R:L139 11.79194.28YesNo088
68R:R:P225 R:R:T140 20.1031.75YesNo087
69R:R:I228 R:R:T140 18.00754.56NoNo077
70R:R:I229 R:R:Y233 62.30693.63YesYes688
71R:R:C232 R:R:I228 15.92081.64NoNo087
72R:R:C232 R:R:V144 12.59991.71NoNo087
73R:R:I148 R:R:V144 11.17923.07NoNo057
74R:R:M236 R:R:Y233 10.98382.39YesYes688
75R:R:V263 R:R:Y233 50.15092.52YesYes078
76R:R:G178 R:R:S177 12.17373.71NoNo034
77R:R:P225 R:R:V224 11.2683.53YesNo085
78R:R:I259 R:R:V263 46.4661.54NoYes087
79R:R:I259 R:R:L240 14.02952.85NoNo1088
80R:R:L240 R:R:V243 12.51111.49NoNo086
81R:R:I259 R:R:L246 30.46537.14NoYes1082
82R:R:L246 R:R:L256 17.17282.77YesYes026
83R:R:L246 R:R:S255 12.51111.5YesNo025
84R:R:R254 R:R:S255 10.04261.32NoNo045
85L:L:?1 R:R:K214 10.83292.39YesNo105
86R:R:V296 R:R:V297 29.32871.6NoNo054
87R:R:D293 R:R:V296 24.40952.92NoNo035
88R:R:T134 R:R:W173 18.36263.64YesYes289
89R:R:I226 R:R:P225 10.86841.69YesYes068
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D128 11.5 1 Yes No 0 5 0 1
L:L:?1 R:R:Y129 17.22 1 Yes No 0 5 0 1
L:L:?1 R:R:M132 11.18 1 Yes No 0 8 0 1
L:L:?1 R:R:K214 2.39 1 Yes No 0 5 0 1
L:L:?1 R:R:I277 4.03 1 Yes No 0 5 0 1
L:L:?1 R:R:V281 3.37 1 Yes No 0 6 0 1
L:L:?1 R:R:W284 7.08 1 Yes No 0 4 0 1
L:L:?1 R:R:L300 10.17 1 Yes No 0 5 0 1
L:L:?1 R:R:I304 8.06 1 Yes Yes 0 5 0 1
L:L:?1 R:R:Y308 7.29 1 Yes Yes 0 7 0 1
R:R:D128 R:R:T101 10.12 1 No Yes 5 7 1 2
R:R:T101 R:R:Y308 6.24 1 Yes Yes 7 7 2 1
R:R:L102 R:R:Y308 16.41 1 No Yes 7 7 2 1
R:R:D128 R:R:Y308 10.34 1 No Yes 5 7 1 1
R:R:I183 R:R:Y129 3.63 0 No No 4 5 2 1
R:R:M132 R:R:W274 3.49 0 No Yes 8 8 1 2
R:R:K214 R:R:V281 9.11 1 No No 5 6 1 1
R:R:C303 R:R:I277 1.64 0 No No 6 5 2 1
R:R:G307 R:R:I277 1.76 0 No No 7 5 2 1
R:R:R291 R:R:W284 3 0 No No 1 4 2 1
R:R:H301 R:R:L300 2.57 1 Yes No 4 5 2 1
R:R:I304 R:R:L300 7.14 1 Yes No 5 5 1 1
R:R:H301 R:R:I304 2.65 1 Yes Yes 4 5 2 1
R:R:C303 R:R:I304 1.64 0 No Yes 6 5 2 1
R:R:K214 R:R:T285 1.5 1 No No 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8Y45_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 1.64
Number of Linked Nodes 261
Number of Links 287
Number of Hubs 36
Number of Links mediated by Hubs 139
Number of Communities 10
Number of Nodes involved in Communities 70
Number of Links involved in Communities 90
Path Summary
Number Of Nodes in MetaPath 90
Number Of Links MetaPath 89
Number of Shortest Paths 37965
Length Of Smallest Path 3
Average Path Length 12.1861
Length of Longest Path 26
Minimum Path Strength 1.19
Average Path Strength 5.20293
Maximum Path Strength 23.465
Minimum Path Correlation 0.7
Average Path Correlation 0.932638
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.26316
Average % Of Corr. Nodes 52.0846
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.3755
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • cation binding   • metal ion binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • regulation of biological process   • cell population proliferation   • regulation of cellular process   • positive regulation of cell population proliferation   • biological regulation   • positive regulation of biological process   • positive regulation of neural precursor cell proliferation   • regulation of cell population proliferation   • cellular process   • neural precursor cell proliferation   • positive regulation of cellular process   • regulation of neural precursor cell proliferation   • reactive oxygen species metabolic process   • regulation of superoxide metabolic process   • positive regulation of reactive oxygen species metabolic process   • superoxide metabolic process   • positive regulation of metabolic process   • superoxide anion generation   • metabolic process   • positive regulation of superoxide anion generation   • regulation of superoxide anion generation   • regulation of metabolic process   • regulation of reactive oxygen species metabolic process   • regulation of calcium ion transport   • regulation of localization   • transport   • regulation of transport   • regulation of monoatomic ion transport   • establishment of localization   • metal ion transport   • calcium ion transport   • localization   • monoatomic ion transport   • regulation of metal ion transport   • monoatomic cation transport   • cellular response to stimulus   • positive regulation of cell communication   • positive regulation of signal transduction   • response to stimulus   • signaling   • regulation of signal transduction   • intracellular signal transduction   • cell communication   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • signal transduction   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • negative regulation of signaling   • negative regulation of biological process   • negative regulation of G protein-coupled receptor signaling pathway   • negative regulation of cell communication   • negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • negative regulation of cellular process   • regulation of G protein-coupled receptor signaling pathway   • adenylate cyclase-activating adrenergic receptor signaling pathway   • negative regulation of response to stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • negative regulation of signal transduction   • negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell division   • regulation of body fluid levels   • multicellular organismal process   • renal system process   • system process   • positive regulation of urine volume   • regulation of urine volume   • regulation of biological quality   • regulation of vascular associated smooth muscle cell proliferation   • positive regulation of vascular associated smooth muscle cell proliferation   • regulation of smooth muscle cell proliferation   • smooth muscle cell proliferation   • positive regulation of smooth muscle cell proliferation   • muscle cell proliferation   • vascular associated smooth muscle cell proliferation   • cell-cell signaling   • gamma-aminobutyric acid signaling pathway   • purinergic nucleotide receptor signaling pathway   • cell surface receptor signaling pathway   • G protein-coupled purinergic receptor signaling pathway   • G protein-coupled adenosine receptor signaling pathway   • regulation of molecular function   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • negative regulation of molecular function   • negative regulation of catalytic activity   • negative regulation of adenylate cyclase activity   • regulated exocytosis   • regulation of calcium ion-dependent exocytosis   • negative regulation of transport   • negative regulation of regulated secretory pathway   • vesicle-mediated transport   • regulation of regulated secretory pathway   • secretion by cell   • regulation of secretion by cell   • negative regulation of secretion   • negative regulation of exocytosis   • negative regulation of secretion by cell   • calcium-ion regulated exocytosis   • secretion   • negative regulation of calcium ion-dependent exocytosis   • export from cell   • regulation of vesicle-mediated transport   • regulation of secretion   • exocytosis   • regulation of exocytosis   • regulation of programmed cell death   • negative regulation of apoptotic signaling pathway   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • apoptotic signaling pathway   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • regulation of apoptotic signaling pathway   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of cell migration   • regulation of locomotion   • positive regulation of cell motility   • regulation of cell migration   • cell migration   • cell motility   • locomotion   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • trans-synaptic signaling   • modulation of chemical synaptic transmission   • negative regulation of synaptic transmission   • chemical synaptic transmission   • synaptic signaling   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • cellular response to nitrogen compound   • cellular response to acetylcholine   • response to oxygen-containing compound   • response to nitrogen compound   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • G protein-coupled acetylcholine receptor signaling pathway   • response to chemical   • response to acetylcholine   • response to nutrient levels   • response to nutrient   • midbody   • intracellular anatomical structure   • dense core granule   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • cytoplasm   • neuronal dense core vesicle   • centrosome   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • intracellular membraneless organelle   • microtubule cytoskeleton   • cytosol   • somatodendritic compartment   • cell projection   • dendrite   • dendritic tree   • neuron projection   • plasma membrane bounded cell projection   • nucleus   • membrane-enclosed lumen   • intracellular organelle lumen   • nucleoplasm   • organelle lumen   • nuclear lumen   • neuron to neuron synapse   • hippocampal mossy fiber to CA3 synapse   • cell body   • cilium   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • non-motile cilium   • 9+0 non-motile cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • G protein-coupled enkephalin receptor activity   • peptide receptor activity   • molecular transducer activity   • G protein-coupled opioid receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • G protein-coupled peptide receptor activity   • neuropeptide binding   • peptide binding   • receptor serine/threonine kinase binding   • neuropeptide signaling pathway   • adult locomotory behavior   • behavior   • adult behavior   • locomotory behavior   • immune response   • immune system process   • regulation of mitochondrial membrane potential   • regulation of membrane potential   • response to decreased oxygen levels   • cellular response to oxygen levels   • cellular response to hypoxia   • cellular response to decreased oxygen levels   • cellular response to stress   • response to hypoxia   • response to stress   • response to oxygen levels   • response to abiotic stimulus   • G protein-coupled opioid receptor signaling pathway   • eating behavior   • feeding behavior   • regulation of cellular component organization   • negative regulation of cellular component organization   • protein-containing complex organization   • regulation of cellular component biogenesis   • negative regulation of protein-containing complex assembly   • cellular component organization   • cellular component biogenesis   • regulation of protein-containing complex assembly   • cellular component assembly   • protein-containing complex assembly   • cellular component organization or biogenesis   • response to ethanol   • cellular response to growth factor stimulus   • response to growth factor   • cellular response to toxic substance   • response to toxic substance   • regulation of biosynthetic process   • negative regulation of metabolic process   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • negative regulation of gene expression   • biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • negative regulation of macromolecule metabolic process   • response to nicotine   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • postsynaptic specialization membrane   • postsynaptic specialization   • postsynaptic density membrane   • synaptic membrane   • postsynaptic density   • postsynapse   • postsynaptic membrane   • asymmetric synapse   • plasma membrane region   • presynapse   • presynaptic membrane   • cell leading edge   • leading edge membrane   • neuron projection membrane   • dendrite membrane   • cell projection membrane   • transport vesicle membrane   • vesicle membrane   • synaptic vesicle   • synaptic vesicle membrane   • transport vesicle   • exocytic vesicle membrane   • cytoplasmic vesicle membrane   • exocytic vesicle   • axon   • axon terminus   • distal axon   • neuron projection terminus   • neuron spine   • dendritic spine   • spine apparatus
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1L
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1L
Name[2-[[(2S)-1-[bis(phenylmethyl)amino]-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-diazonio-azanide
Synonyms
Identifier
FormulaC24 H31 N9 O3
Molecular Weight493.561
SMILES
PubChem44129754
Formal Charge0
Total Atoms67
Total Chiral Atoms1
Total Bonds68
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP41143
Sequence
>8Y45_nogp_Chain_R
SLALAIAIT ALYSAVCAV GLLGNVLVM FGIVRYTKM KTATNIYIF 
NLALADALA TSTLPFQSA KYLMETWPF GELLCKAVL SIDYYNMFT 
SIFTLTMMS VDRYIAVCH PVKALDFRT PAKAKLINI CIWVLASGV 
GVPIMVMAV TRPRDGAVV CMLQFPSPS WYWDTVTKI CVFLFAFVV 
PILIITVCY GLMLLRLRS VRLLSGSKE KDRSLRRIT RMVLVVVGA 
FVVCWAPIH IFVIVWTLV DIDRRDPLV VAALHLCIA LGYANSSLN 
PVLYAFLDE NFKRCFR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4N6HAPeptideOpioidδHomo sapiensNaltrindoleNa-1.82013-12-25doi.org/10.1038/nature12944
4RWDAPeptideOpioidδHomo sapiensDIPP-NH2Na-2.72015-01-14doi.org/10.1038/nsmb.2965
8F7SAPeptideOpioidδHomo sapiensDeltorphin-Gi1/β1/γ232022-12-14doi.org/10.1016/j.cell.2022.12.026
8F7S (No Gprot) APeptideOpioidδHomo sapiensDeltorphin-32022-12-14doi.org/10.1016/j.cell.2022.12.026
4EJ4APeptideOpioidδMus musculusNaltrindole--3.42012-05-16doi.org/10.1038/nature11111
4RWAAPeptideOpioidδHomo sapiensDIPP-NH2--3.282015-01-14doi.org/10.1038/nsmb.2965
6PT2APeptideOpioidδHomo sapiensKGCHM07--2.82019-12-11doi.org/10.1126/sciadv.aax9115
6PT3APeptideOpioidδHomo sapiensDPI-287--3.32019-12-11doi.org/10.1126/sciadv.aax9115
8Y45APeptideOpioidδHomo sapiensADL5859-Gi2/β1/γ23.452024-11-27doi.org/10.1038/s41467-024-52601-1
8Y45 (No Gprot) APeptideOpioidδHomo sapiensADL5859-3.452024-11-27doi.org/10.1038/s41467-024-52601-1
9CGJAPeptideOpioidδHomo sapiensC6-Quino-Gi1/β1/γ22.82025-04-02doi.org/10.1038/s41467-025-57734-5
9CGJ (No Gprot) APeptideOpioidδHomo sapiensC6-Quino-2.82025-04-02doi.org/10.1038/s41467-025-57734-5
9CGKAPeptideOpioidδHomo sapiensC5-Quino-Gi1/β1/γ22.622025-04-02doi.org/10.1038/s41467-025-57734-5
9CGK (No Gprot) APeptideOpioidδHomo sapiensC5-Quino-2.622025-04-02doi.org/10.1038/s41467-025-57734-5




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8Y45_nogp.zip



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