Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F5 6.702514
2R:R:Y6 8.04667616
3R:R:R7 4.1825414
4R:R:N34 5.76459
5R:R:V60 3.42537
6R:R:Y62 5.09467
7R:R:L68 6.28529
8R:R:T69 4.21458
9R:R:D72 6.0775409
10R:R:K76 6.8625418
11R:R:S80 6.85418
12R:R:Y87 8.16333618
13R:R:L104 3.59415
14R:R:F108 6.516516
15R:R:M112 6.495418
16R:R:F114 8.4625417
17R:R:F115 8.2275408
18R:R:L117 5.4875418
19R:R:S118 4.165417
20R:R:L121 5.5875405
21R:R:M126 5.45409
22R:R:L132 4.7775405
23R:R:Y140 11.8575438
24R:R:L146 2.9925404
25R:R:F163 5.062517
26R:R:F174 6.964506
27R:R:Q176 5.7625405
28R:R:Y177 9.166519
29R:R:P179 4.49418
30R:R:W182 11.152519
31R:R:F184 5.90667618
32R:R:I185 6.195617
33R:R:Q186 7.7425415
34R:R:V196 6.325415
35R:R:Y199 8.53167616
36R:R:Y203 5.486518
37R:R:L206 4.555415
38R:R:L210 5.2825406
39R:R:M222 2.8775407
40R:R:E260 4.962509
41R:R:M270 4.8675429
42R:R:F274 5.924529
43R:R:R284 9.84515
44R:R:Y286 8.0425475
45R:R:Y287 4.25404
46R:R:E301 6.005613
47R:R:I315 5.3575429
48R:R:I317 4.705409
49R:R:D319 6.404529
50R:R:I322 4.4625408
51R:R:I324 4.0775409
52L:L:?1 8.564551110
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F5 R:R:Y6 14.904716.5YesYes146
2R:R:Y177 R:R:Y6 54.99023.97YesYes196
3R:R:Q186 R:R:Y6 10.09255.64YesYes156
4R:R:C178 R:R:R7 12.51235.57NoYes144
5R:R:C178 R:R:P179 16.66213.77NoYes148
6R:R:P179 R:R:W182 13.96046.76YesYes189
7R:R:W182 R:R:Y177 28.13726.04YesYes199
8R:R:F184 R:R:Y177 60.09254.13YesYes189
9R:R:F184 R:R:I185 75.95536.28YesYes187
10R:R:F174 R:R:I185 20.59025.02YesYes067
11R:R:F174 R:R:Q106 14.70778.2YesNo064
12R:R:C105 R:R:Q106 13.25693.05NoNo094
13R:R:C105 R:R:R94 11.80062.79NoNo092
14L:L:?1 R:R:W182 28.117814.98YesYes109
15L:L:?1 R:R:Y87 12.78066.17YesYes108
16L:L:?1 R:R:K76 71.761713.91YesYes108
17R:R:K76 R:R:S316 70.54366.12YesNo088
18R:R:D72 R:R:S316 70.27548.83YesNo098
19R:R:D72 R:R:L68 68.16765.43YesYes099
20R:R:D319 R:R:L68 15.80816.79YesYes299
21R:R:D319 R:R:M270 19.50894.16YesYes299
22R:R:I322 R:R:M270 18.2997.29YesYes089
23R:R:F326 R:R:I322 12.36456.28NoYes058
24R:R:I324 R:R:V65 13.61823.07YesNo098
25R:R:M126 R:R:V65 15.64383.04YesNo098
26R:R:L68 R:R:M126 42.45875.65YesYes099
27R:R:L64 R:R:M126 30.98115.65NoYes089
28R:R:L64 R:R:V60 26.31392.98NoYes087
29R:R:I144 R:R:V60 14.55443.07NoYes357
30R:R:L123 R:R:L68 28.80765.54NoYes289
31R:R:F114 R:R:S160 11.41743.96YesNo177
32R:R:L117 R:R:S160 16.96326.01YesNo187
33R:R:F163 R:R:L117 18.66314.87YesYes178
34R:R:F163 R:R:Y199 30.63894.13YesYes176
35R:R:I185 R:R:Y199 29.267510.88YesYes176
36R:R:F163 R:R:Y203 46.89864.13YesYes178
37R:R:I185 R:R:Y203 43.34567.25YesYes178
38R:R:S113 R:R:Y203 37.57253.82NoYes178
39R:R:F184 R:R:S113 37.9015.28YesNo187
40R:R:F108 R:R:M112 39.57633.73YesYes168
41R:R:F184 R:R:M112 43.47428.71YesYes188
42L:L:?1 R:R:L79 12.93117.28YesNo106
43R:R:F108 R:R:L93 30.9924.87YesNo166
44R:R:F108 R:R:V82 31.16997.87YesNo166
45R:R:L104 R:R:V82 28.60234.47YesNo156
46R:R:L104 R:R:L93 28.60235.54YesNo156
47L:L:?1 R:R:V83 14.94587.84YesNo009
48R:R:L104 R:R:L96 20.87762.77YesNo054
49R:R:L96 R:R:Q89 10.44847.99NoNo045
50R:R:A97 R:R:L104 31.28491.58NoYes015
51R:R:A97 R:R:D101 20.87766.18NoNo014
52R:R:D101 R:R:S103 10.44844.42NoNo043
53R:R:F163 R:R:L206 56.38626.09YesYes175
54R:R:M207 R:R:Y203 33.313310.78NoYes078
55R:R:M207 R:R:T120 32.61256.02NoNo077
56R:R:L206 R:R:L210 55.93735.54YesYes056
57R:R:L210 R:R:T120 32.09515.9YesNo067
58R:R:F274 R:R:L123 32.70563.65YesNo298
59R:R:L124 R:R:L210 90.45774.15NoYes056
60R:R:L124 R:R:T214 86.49957.37NoNo058
61R:R:N218 R:R:T214 1004.39NoNo098
62R:R:I144 R:R:L132 13.73322.85NoYes055
63R:R:L225 R:R:L264 70.76548.3NoNo097
64R:R:L264 R:R:M222 73.23172.83NoYes077
65R:R:L219 R:R:M222 80.59782.83NoYes057
66R:R:L219 R:R:V215 83.04232.98NoNo056
67R:R:T271 R:R:V215 92.76534.76NoNo086
68R:R:N218 R:R:T271 95.182313.16NoNo098
69R:R:D305 R:R:Y177 26.33866.9NoYes179
70R:R:D305 R:R:R284 42.43413.1NoYes175
71R:R:E301 R:R:R284 16.454112.79YesYes135
72R:R:E301 R:R:F5 10.56883.5YesYes134
73R:R:H189 R:R:V188 26.6265.54NoNo043
74R:R:H189 R:R:L197 23.9165.14NoNo044
75R:R:L197 R:R:V201 11.27787.45NoNo044
76R:R:A289 R:R:L197 11.27783.15NoNo074
77R:R:F290 R:R:Y286 16.96328.25NoYes035
78R:R:E260 R:R:L225 61.01233.98YesNo099
79R:R:E260 R:R:H229 12.98863.69YesNo096
80R:R:E260 R:R:M228 15.62476.77YesNo098
81R:R:M228 R:R:R231 13.04064.96NoNo085
82R:R:E259 R:R:E260 28.2935.07NoYes069
83R:R:E259 R:R:L258 23.273.98NoNo066
84R:R:L258 R:R:R332 15.50152.43NoNo066
85R:R:P329 R:R:R332 13.08175.76NoNo076
86R:R:P329 R:R:Q256 10.47571.58NoNo075
87R:R:E301 R:R:Y287 10.9635.61YesYes034
88R:R:E301 R:R:S300 10.97671.44YesNo031
89R:R:A308 R:R:P280 11.91831.87NoNo079
90R:R:A308 R:R:R284 14.28612.77NoYes075
91R:R:V188 R:R:Y6 26.75468.83NoYes136
92R:R:D305 R:R:M187 18.16224.16NoNo177
93R:R:F184 R:R:M187 19.34743.73YesNo187
94R:R:F108 R:R:V83 14.20673.93YesNo069
95R:R:F108 R:R:L79 12.320712.18YesNo166
96L:L:?1 R:R:M112 27.47189.3YesYes108
97R:R:F274 R:R:T214 37.24953.89YesNo098
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:N18 R:R:Y87 9.3 1 No Yes 3 8 2 1
R:R:N18 R:R:P179 3.26 1 No Yes 3 8 2 2
R:R:A20 R:R:Y87 9.34 0 No Yes 6 8 2 1
R:R:M22 R:R:R310 14.89 0 No No 3 9 2 1
R:R:F27 R:R:S80 11.89 1 No Yes 8 8 2 1
R:R:F27 R:R:P81 5.78 1 No No 8 8 2 2
R:R:K76 R:R:S80 3.06 1 Yes Yes 8 8 1 1
R:R:K76 R:R:S316 6.12 1 Yes No 8 8 1 2
R:R:I317 R:R:K76 4.36 0 Yes Yes 9 8 2 1
L:L:?1 R:R:K76 13.91 1 Yes Yes 0 8 0 1
R:R:F108 R:R:L79 12.18 1 Yes No 6 6 2 1
R:R:L79 R:R:M112 4.24 1 No Yes 6 8 1 1
L:L:?1 R:R:L79 7.28 1 Yes No 0 6 0 1
R:R:P81 R:R:S80 3.56 1 No Yes 8 8 2 1
L:L:?1 R:R:S80 8.89 1 Yes Yes 0 8 0 1
R:R:F108 R:R:V83 3.93 1 Yes No 6 9 2 1
R:R:T181 R:R:V83 3.17 0 No No 9 9 2 1
L:L:?1 R:R:V83 7.84 1 Yes No 0 9 0 1
R:R:P179 R:R:Y87 4.17 1 Yes Yes 8 8 2 1
R:R:T181 R:R:Y87 17.48 0 No Yes 9 8 2 1
L:L:?1 R:R:Y87 6.17 1 Yes Yes 0 8 0 1
R:R:F108 R:R:M112 3.73 1 Yes Yes 6 8 2 1
R:R:F184 R:R:M112 8.71 1 Yes Yes 8 8 2 1
L:L:?1 R:R:M112 9.3 1 Yes Yes 0 8 0 1
R:R:W182 R:R:Y177 26.04 1 Yes Yes 9 9 1 2
R:R:F184 R:R:Y177 4.13 1 Yes Yes 8 9 2 2
R:R:P179 R:R:W182 6.76 1 Yes Yes 8 9 2 1
R:R:L306 R:R:W182 4.56 1 No Yes 7 9 1 1
R:R:L309 R:R:W182 3.42 0 No Yes 7 9 2 1
L:L:?1 R:R:W182 14.98 1 Yes Yes 0 9 0 1
R:R:F184 R:R:L309 7.31 1 Yes No 8 7 2 2
R:R:L312 R:R:V281 5.96 0 No No 8 8 1 2
R:R:L306 R:R:R310 14.58 1 No No 7 9 1 1
L:L:?1 R:R:L306 4.55 1 Yes No 0 7 0 1
L:L:?1 R:R:R310 9.59 1 Yes No 0 9 0 1
L:L:?1 R:R:S313 9.88 1 Yes No 0 9 0 1
R:R:V14 R:R:Y87 2.52 0 No Yes 4 8 2 1
L:L:?1 R:R:L312 1.82 1 Yes No 0 8 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8ZW0_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.04
Number of Linked Nodes 290
Number of Links 340
Number of Hubs 52
Number of Links mediated by Hubs 195
Number of Communities 7
Number of Nodes involved in Communities 79
Number of Links involved in Communities 112
Path Summary
Number Of Nodes in MetaPath 98
Number Of Links MetaPath 97
Number of Shortest Paths 98352
Length Of Smallest Path 3
Average Path Length 15.0708
Length of Longest Path 33
Minimum Path Strength 1.38
Average Path Strength 6.20885
Maximum Path Strength 18.31
Minimum Path Correlation 0.7
Average Path Correlation 0.932982
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 46.4947
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 50.2492
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • localization   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • intracellular protein localization   • regulation of peptide hormone secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • regulation of peptide transport   • regulation of establishment of protein localization   • establishment of protein localization to extracellular region   • export from cell   • cell-cell signaling   • regulation of protein transport   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • peptide transport   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • cellular localization   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • synapse   • cell junction   • prostanoid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • icosanoid receptor activity   • prostaglandin D receptor activity   • prostaglandin receptor activity   • prostaglandin J receptor activity   • multicellular organismal process   • sleep   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • establishment of organelle localization   • regulated exocytosis   • cellular localization   • transport   • cell activation involved in immune response   • leukocyte degranulation   • myeloid leukocyte activation   • myeloid leukocyte mediated immunity   • vesicle-mediated transport   • leukocyte activation   • localization   • secretion by cell   • organelle localization   • leukocyte activation involved in immune response   • establishment of localization in cell   • mast cell activation   • leukocyte mediated immunity   • mast cell mediated immunity   • immune response   • secretion   • cell activation   • vacuolar localization   • export from cell   • mast cell degranulation   • establishment of localization   • myeloid cell activation involved in immune response   • immune effector process   • mast cell activation involved in immune response   • exocytosis   • immune system process   • lysosome localization   • developmental process   • multicellular organism development   • sex determination   • male sex determination   • reproductive process   • anatomical structure development   • developmental process involved in reproduction   • defense response   • response to stress   • inflammatory response   • cellular response to prostaglandin D stimulus   • response to prostaglandin D   • carbohydrate derivative metabolic process   • primary metabolic process   • nucleoside metabolic process   • purine-containing compound metabolic process   • nucleobase-containing compound metabolic process   • adenosine metabolic process   • nucleobase-containing small molecule metabolic process   • metabolic process   • small molecule metabolic process   • purine nucleoside metabolic process   • ribonucleoside metabolic process   • purine ribonucleoside metabolic process   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodePG2
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodePG2
NameProstaglandin D2
Synonyms(5E,13E)-9,15-DIHYDROXY-11-OXOPROSTA-5,13-DIEN-1-OIC ACID
Identifier
FormulaC20 H32 O5
Molecular Weight352.465
SMILES
PubChem448457
Formal Charge0
Total Atoms57
Total Chiral Atoms4
Total Bonds57
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13258
Sequence
>8ZW0_nogp_Chain_R
PFYRCQNTT SVEKGNSAV MGGVLFSTG LLGNLLALG LLARSGLGP 
LPSVFYMLV CGLTVTDLL GKCLLSPVV LAAYAQNRS LRVLAPALD 
NSLCQAFAF FMSFFGLSS TLQLLAMAL ECWLSLGHP FFYRRHITL 
RLGALVAPV VSAFSLAFC ALPFMGFGK FVQYCPGTW CFIQMVHEE 
GSLSVLGYS VLYSSLMAL LVLATVLCN LGAMRNLYA MHRRLQRHP 
QPLEELDHL LLLALMTVL FTMCSLPVI YRAYYGAFK DVKEKNRTS 
EEAEDLRAL RFLSVISIV DPWIFIIFR SPVFRIFF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9UWDALipidProstaglandinDP1Homo sapiens----2025-04-09doi.org/10.1073/pnas.2501902122
8ZVZALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.352025-05-28doi.org/10.1073/pnas.2501902122
8ZVZ (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.352025-05-28doi.org/10.1073/pnas.2501902122
8ZW0ALipidProstaglandinDP1Homo sapiensPGD2-Gs/β1/γ22.722025-05-28doi.org/10.1073/pnas.2501902122
8ZW0 (No Gprot) ALipidProstaglandinDP1Homo sapiensPGD2-2.722025-05-28doi.org/10.1073/pnas.2501902122
9AU0ALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.452025-08-27To be published
9AU0 (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.452025-08-27To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8ZW0_nogp.zip



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