Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 6.501331510
2R:R:F5 9.3225414
3R:R:Y6 7.95667616
4R:R:R7 8.9775444
5R:R:E15 3.855443
6R:R:V60 3.205457
7R:R:Y62 4.7425407
8R:R:L68 5.19539
9R:R:D72 7.305439
10R:R:F108 5.8975406
11R:R:M112 4.68418
12R:R:F114 7.125407
13R:R:F115 5.57568
14R:R:L117 4.755418
15R:R:W131 4.2825406
16R:R:Y140 8.425458
17R:R:F163 4.315617
18R:R:F174 6.0125406
19R:R:Y177 8.75833619
20R:R:T181 4.74167619
21R:R:W182 9.355419
22R:R:F184 7.1975418
23R:R:I185 6.546517
24R:R:Q186 5.532515
25R:R:H189 6.69667614
26R:R:Y199 6.35571716
27R:R:Y203 5.36667618
28R:R:M222 4.6425407
29R:R:H229 8.195426
30R:R:E260 4.37529
31R:R:M270 4.5875439
32R:R:F274 6.485439
33R:R:R284 11.83415
34R:R:Y286 5.015405
35R:R:Y287 8.408514
36R:R:E301 6.988513
37R:R:I317 5.01419
38R:R:D319 5.31539
39R:R:F323 4.65439
40R:R:I324 4.824509
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:Q9 R:R:Y6 12.20923.38NoYes126
2R:R:Y177 R:R:Y6 30.30359.93YesYes196
3R:R:W182 R:R:Y177 44.45718.33YesYes199
4L:L:?1 R:R:W182 44.34835.43YesYes109
5L:L:?1 R:R:K76 10.236713.43YesNo108
6L:L:?1 R:R:L79 10.64333.77YesNo006
7R:R:F184 R:R:Y177 18.27955.16YesYes189
8R:R:F184 R:R:M112 42.79854.98YesYes188
9L:L:?1 R:R:T181 23.00944.01YesYes109
10L:L:?1 R:R:L312 10.23675.65YesNo008
11L:L:?1 R:R:S316 1003.07YesNo008
12R:R:Q186 R:R:Y6 10.34145.64YesYes156
13R:R:E15 R:R:P179 14.44333.14YesNo038
14R:R:D72 R:R:S316 99.68211.78YesNo098
15R:R:D72 R:R:N34 16.17025.39YesNo099
16R:R:N34 R:R:P320 14.958513.03NoNo099
17R:R:P320 R:R:W321 12.51112.7NoNo098
18R:R:D319 R:R:D72 44.25977.98YesYes399
19R:R:D319 R:R:F323 22.92494.78YesYes399
20R:R:F323 R:R:V65 28.03322.62YesNo098
21R:R:I324 R:R:V65 20.04273.07YesNo098
22R:R:I324 R:R:L41 11.57727.14YesNo099
23R:R:L41 R:R:Y62 10.31722.34NoYes097
24R:R:D72 R:R:L68 50.17314.07YesYes399
25R:R:L68 R:R:M126 49.13865.65YesNo099
26R:R:L64 R:R:M126 58.99285.65NoNo089
27R:R:E129 R:R:L64 55.03185.3NoNo098
28R:R:E129 R:R:Y140 49.56938.98NoYes598
29R:R:F184 R:R:I185 53.389412.56YesYes187
30R:R:I185 R:R:Y203 29.88498.46YesYes178
31R:R:L117 R:R:Y203 16.21454.69YesYes188
32R:R:L117 R:R:S160 15.95687.51YesNo087
33R:R:S118 R:R:S160 14.77744.89NoNo077
34R:R:F114 R:R:S118 13.58996.61YesNo077
35R:R:F108 R:R:M112 15.78783.73YesYes068
36R:R:F108 R:R:V82 17.74825.24YesNo066
37R:R:L104 R:R:V82 15.80792.98NoNo056
38R:R:L104 R:R:L96 11.90324.15NoNo054
39R:R:I185 R:R:Y199 16.62514.84YesYes176
40R:R:D319 R:R:M270 19.04844.16YesYes399
41R:R:F274 R:R:M270 24.87323.73YesYes399
42R:R:F274 R:R:T214 21.346910.38YesNo098
43R:R:L124 R:R:T214 20.15544.42NoNo058
44R:R:L124 R:R:L128 17.74824.15NoNo057
45R:R:S133 R:R:Y140 44.79517.63NoYes098
46R:R:L134 R:R:S133 43.75254.5NoNo089
47R:R:L134 R:R:L225 31.00394.15NoNo089
48R:R:L225 R:R:L264 10.25284.15NoNo097
49R:R:L219 R:R:M222 12.47482.83NoYes057
50R:R:C130 R:R:L134 12.10851.59NoNo098
51R:R:L128 R:R:W131 15.30882.28NoYes076
52R:R:M187 R:R:Y177 13.38867.18NoYes079
53R:R:D305 R:R:Y177 13.62616.9NoYes079
54R:R:H189 R:R:Q186 13.15113.71YesYes145
55R:R:A285 R:R:M187 11.11833.22NoNo077
56R:R:E260 R:R:L225 20.97252.65YesNo099
57R:R:D305 R:R:R284 12.603713.1NoYes075
58R:R:P179 R:R:T181 17.83673.5NoYes089
59L:L:?1 R:R:M112 47.05345.77YesYes108
60R:R:V175 R:R:Y177 10.09185.05NoYes149
61R:R:F323 R:R:M126 11.24314.98YesNo099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:G23 3.49 1 Yes No 0 8 0 1
L:L:?1 R:R:K76 13.43 1 Yes No 0 8 0 1
L:L:?1 R:R:L79 3.77 1 Yes No 0 6 0 1
L:L:?1 R:R:S80 13.28 1 Yes No 0 8 0 1
L:L:?1 R:R:V83 10.14 1 Yes No 0 9 0 1
L:L:?1 R:R:Y87 7.18 1 Yes No 0 8 0 1
L:L:?1 R:R:M112 5.77 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T181 4.01 1 Yes Yes 0 9 0 1
L:L:?1 R:R:W182 5.43 1 Yes Yes 0 9 0 1
L:L:?1 R:R:L306 3.77 1 Yes No 0 7 0 1
L:L:?1 R:R:R310 4.96 1 Yes No 0 9 0 1
L:L:?1 R:R:L312 5.65 1 Yes No 0 8 0 1
L:L:?1 R:R:S313 11.24 1 Yes No 0 9 0 1
L:L:?1 R:R:S316 3.07 1 Yes No 0 8 0 1
R:R:T181 R:R:V14 3.17 1 Yes No 9 4 1 2
R:R:A20 R:R:Y87 6.67 0 No No 6 8 2 1
R:R:M22 R:R:R310 11.17 0 No No 3 9 2 1
R:R:F27 R:R:S80 11.89 0 No No 8 8 2 1
R:R:G30 R:R:K76 3.49 1 No No 9 8 2 1
R:R:G30 R:R:I317 5.29 1 No Yes 9 9 2 2
R:R:D72 R:R:S316 11.78 3 Yes No 9 8 2 1
R:R:I317 R:R:K76 5.82 1 Yes No 9 8 2 1
R:R:F108 R:R:L79 7.31 0 Yes No 6 6 2 1
R:R:P81 R:R:S80 3.56 0 No No 8 8 2 1
R:R:T181 R:R:V83 3.17 1 Yes No 9 9 1 1
R:R:A86 R:R:T181 3.36 0 No Yes 6 9 2 1
R:R:T181 R:R:Y87 11.24 1 Yes No 9 8 1 1
R:R:F108 R:R:M112 3.73 0 Yes Yes 6 8 2 1
R:R:F184 R:R:M112 4.98 1 Yes Yes 8 8 2 1
R:R:L309 R:R:M112 4.24 1 No Yes 7 8 2 1
R:R:W182 R:R:Y177 18.33 1 Yes Yes 9 9 1 2
R:R:F184 R:R:Y177 5.16 1 Yes Yes 8 9 2 2
R:R:P179 R:R:T181 3.5 0 No Yes 8 9 2 1
R:R:L306 R:R:W182 5.69 1 No Yes 7 9 1 1
R:R:L309 R:R:W182 7.97 1 No Yes 7 9 2 1
R:R:F184 R:R:L309 6.09 1 Yes No 8 7 2 2
R:R:L312 R:R:V281 5.96 0 No No 8 8 1 2
R:R:L306 R:R:R310 17.01 1 No No 7 9 1 1
L:L:?1 R:R:G116 2.33 1 Yes No 0 8 0 1
R:R:G23 R:R:G24 2.11 0 No No 8 4 1 2
R:R:G116 R:R:S119 1.86 0 No No 8 8 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9AU0_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 287
Number of Links 328
Number of Hubs 40
Number of Links mediated by Hubs 160
Number of Communities 7
Number of Nodes involved in Communities 70
Number of Links involved in Communities 97
Path Summary
Number Of Nodes in MetaPath 62
Number Of Links MetaPath 61
Number of Shortest Paths 50435
Length Of Smallest Path 3
Average Path Length 12.5987
Length of Longest Path 30
Minimum Path Strength 1.38
Average Path Strength 6.17322
Maximum Path Strength 18.71
Minimum Path Correlation 0.7
Average Path Correlation 0.921239
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 49.3447
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.3877
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetylchitosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13258
Sequence
>9AU0_nogp_Chain_R
SPFYRCQNT TSVEKGNSA VMGGVLFST GLLGNLLAL GLLARSGLG 
WPSVFYMLV CGLTVTDLL GKCLLSPVV LAAYAQNRS LRVLAPALD 
NSLCQAFAF FMSFFGLSS TLQLLAMAL ECWLSLGHP FFYRRHITL 
RLGALVAPV VSAFSLAFC ALPFMGFGK FVQYCPGTW CFIQMVHEE 
GSLSVLGYS VLYSSLMAL LVLATVLCN LGAMRNLYA MHRRLQRHP 
QPLEELDHL LLLALMTVL FTMCSLPVI YRAYYGAFK DVKEKNRTS 
EEAEDLRAL RFLSVISIV DPWIFIIFR SPVFRIFFH K


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9E9SALipidProstanoidDP1Homo sapiensPGD2-Gs/β1/γ12.682025-09-03To be published
9E9S (No Gprot) ALipidProstanoidDP1Homo sapiensPGD2-2.682025-09-03To be published
9EE5ALipidProstanoidDP1Homo sapiensONO-2550289--2.892025-09-03doi.org/10.1038/s41467-025-64002-z
9EI5ALipidProstanoidDP1Homo sapiens---2.842025-09-03doi.org/10.1038/s41467-025-64002-z
9EKHALipidProstanoidDP1Homo sapiensONO-3030297--2.892025-09-03doi.org/10.1038/s41467-025-64002-z
9UWDALipidProstaglandinDP1Homo sapiens----2025-04-09doi.org/10.1073/pnas.2501902122
8ZVZALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.352025-05-28doi.org/10.1073/pnas.2501902122
8ZVZ (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.352025-05-28doi.org/10.1073/pnas.2501902122
8ZW0ALipidProstaglandinDP1Homo sapiensPGD2-Gs/β1/γ22.722025-05-28doi.org/10.1073/pnas.2501902122
8ZW0 (No Gprot) ALipidProstaglandinDP1Homo sapiensPGD2-2.722025-05-28doi.org/10.1073/pnas.2501902122
9AU0ALipidProstaglandinDP1Homo sapiensBW245C-Gs/β1/γ22.452025-08-27To be published
9AU0 (No Gprot) ALipidProstaglandinDP1Homo sapiensBW245C-2.452025-08-27To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9AU0_nogp.zip



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