Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.741671210
2R:R:F12 13.6875443
3R:R:E21 7.3275452
4R:R:I25 3.73403
5R:R:L49 5.21438
6R:R:H58 6.7475405
7R:R:R60 3.855466
8R:R:F66 4.5775407
9R:R:L70 3.9525419
10R:R:D74 5.152519
11R:R:F75 4.618507
12R:R:H89 8.11407
13R:R:W95 7.572546
14R:R:I113 3.9875407
15R:R:F115 6.47507
16R:R:S118 4.475417
17R:R:M126 4.616509
18R:R:R130 5.25419
19R:R:Y131 5.43667607
20R:R:V153 4.6625407
21R:R:W157 6.366517
22R:R:L163 4.0275426
23R:R:P167 8.535429
24R:R:Y174 7.72526
25R:R:Y178 12.5175453
26R:R:W182 6.53717
27R:R:F184 6.08408
28R:R:F196 5.98527
29R:R:L214 3.0275407
30R:R:N215 4.26409
31R:R:Y226 14.1354106
32R:R:R237 18.76254105
33R:R:E240 5.73754108
34R:R:I250 4.8325418
35R:R:W258 8.744518
36R:R:F264 5.6525404
37R:R:R284 8.25451
38R:R:R295 10.7775408
39R:R:N300 8.455419
40R:R:Q301 7.03519
41R:R:D304 6.4325419
42R:R:Y308 6.06333619
43R:R:I309 4.412539
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:M112 32.47154.14YesNo008
2R:R:F184 R:R:M112 31.6726.22YesNo088
3R:R:F184 R:R:I113 46.78733.77YesYes087
4R:R:I113 R:R:Y174 27.51873.63YesYes076
5R:R:V110 R:R:Y174 18.51385.05NoYes066
6R:R:L168 R:R:V110 13.00262.98NoNo056
7R:R:L168 R:R:R106 11.15653.64NoNo055
8L:L:?1 R:R:W182 82.62439.17YesYes107
9R:R:F184 R:R:W182 36.67157.02YesYes087
10R:R:M108 R:R:W182 13.81772.33NoYes067
11R:R:M108 R:R:W95 11.96382.33NoYes066
12R:R:P179 R:R:W182 37.54112.7NoYes087
13R:R:P179 R:R:Y178 35.751416.69NoYes083
14R:R:E287 R:R:Y178 16.103511.22NoYes533
15R:R:E287 R:R:L282 15.69892.65NoNo034
16R:R:L282 R:R:M276 10.55342.83NoNo041
17L:L:?1 R:R:H89 12.22064.7YesYes007
18R:R:E21 R:R:Y178 17.8996.73YesYes523
19R:R:E21 R:R:I25 14.53562.73YesYes023
20R:R:I25 R:R:R295 11.5325.01YesYes038
21L:L:?1 R:R:Q301 1008.76YesYes109
22R:R:D74 R:R:Q301 63.738910.44YesYes199
23R:R:D74 R:R:N42 10.75194.04YesNo099
24L:L:?1 R:R:W258 33.29837.5YesYes108
25R:R:N300 R:R:W258 30.897813.56YesYes198
26R:R:D304 R:R:N300 58.266710.77YesYes199
27R:R:D304 R:R:Y308 86.65896.9YesYes199
28R:R:M126 R:R:Y308 38.08778.38YesYes099
29R:R:L67 R:R:M126 28.79294.24NoYes089
30R:R:I309 R:R:L67 14.8745.71YesNo398
31R:R:N300 R:R:Q301 28.42917.92YesYes199
32R:R:D304 R:R:D74 29.46993.99YesYes199
33R:R:D74 R:R:L70 29.81424.07YesYes199
34R:R:L70 R:R:Y308 30.65073.52YesYes199
35R:R:R130 R:R:Y308 11.14484.12YesYes199
36R:R:L49 R:R:L67 12.47744.15YesNo388
37R:R:C68 R:R:L49 13.37617.94NoYes058
38R:R:C68 R:R:L64 11.50283.17NoNo057
39R:R:I250 R:R:Y308 73.15639.67YesYes189
40R:R:I250 R:R:N215 72.76532.83YesYes089
41R:R:A127 R:R:N215 33.04743.13NoYes099
42R:R:A127 R:R:L214 28.43113.15NoYes097
43R:R:L214 R:R:Y131 23.77984.69YesYes077
44R:R:L132 R:R:Y131 11.20513.52NoYes067
45R:R:Q88 R:R:S181 10.0715.78NoNo068
46R:R:F200 R:R:I113 16.68325.02NoYes087
47R:R:F184 R:R:L185 19.78997.31YesNo085
48R:R:F196 R:R:L185 18.01198.53YesNo075
49R:R:F200 R:R:I265 14.84492.51NoNo087
50R:R:L247 R:R:N215 34.32556.87NoYes089
51R:R:L247 R:R:M243 28.17434.24NoNo088
52R:R:L222 R:R:M243 26.70752.83NoNo088
53R:R:E240 R:R:L222 17.42636.63YesNo088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:A31 6.92 1 Yes No 0 7 0 1
L:L:?1 R:R:L78 7.09 1 Yes No 0 8 0 1
L:L:?1 R:R:T81 11.86 1 Yes No 0 7 0 1
L:L:?1 R:R:V85 10.9 1 Yes No 0 8 0 1
L:L:?1 R:R:H89 4.7 1 Yes Yes 0 7 0 1
L:L:?1 R:R:M112 4.14 1 Yes No 0 8 0 1
L:L:?1 R:R:G116 5 1 Yes No 0 7 0 1
L:L:?1 R:R:W182 9.17 1 Yes Yes 0 7 0 1
L:L:?1 R:R:W258 7.5 1 Yes Yes 0 8 0 1
L:L:?1 R:R:L294 6.08 1 Yes No 0 7 0 1
L:L:?1 R:R:T298 10.78 1 Yes No 0 8 0 1
L:L:?1 R:R:Q301 8.76 1 Yes Yes 0 9 0 1
R:R:H89 R:R:R22 4.51 0 Yes No 7 1 1 2
R:R:H89 R:R:P28 10.68 0 Yes No 7 6 1 2
R:R:D74 R:R:P119 3.22 1 Yes No 9 8 2 2
R:R:D74 R:R:Q301 10.44 1 Yes Yes 9 9 2 1
R:R:S181 R:R:V85 4.85 0 No No 8 8 2 1
R:R:H89 R:R:S181 12.55 0 Yes No 7 8 1 2
R:R:F184 R:R:M112 6.22 0 Yes No 8 8 2 1
R:R:P119 R:R:Q301 4.74 1 No Yes 8 9 2 1
R:R:L120 R:R:W258 14.81 0 No Yes 8 8 2 1
R:R:Q177 R:R:W182 14.24 0 No Yes 7 7 2 1
R:R:F184 R:R:W182 7.02 0 Yes Yes 8 7 2 1
R:R:L290 R:R:W182 5.69 0 No Yes 6 7 2 1
R:R:L294 R:R:W182 4.56 1 No Yes 7 7 1 1
R:R:L262 R:R:W258 4.56 0 No Yes 8 8 2 1
R:R:N300 R:R:W258 13.56 1 Yes Yes 9 8 2 1
R:R:Q301 R:R:W258 3.29 1 Yes Yes 9 8 1 1
R:R:N300 R:R:Q301 7.92 1 Yes Yes 9 9 2 1
R:R:P179 R:R:W182 2.7 0 No Yes 8 7 2 1
R:R:M108 R:R:W182 2.33 0 No Yes 6 7 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9GGG_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 273
Number of Links 304
Number of Hubs 43
Number of Links mediated by Hubs 157
Number of Communities 10
Number of Nodes involved in Communities 53
Number of Links involved in Communities 68
Path Summary
Number Of Nodes in MetaPath 54
Number Of Links MetaPath 53
Number of Shortest Paths 88274
Length Of Smallest Path 3
Average Path Length 13.8558
Length of Longest Path 28
Minimum Path Strength 1.38
Average Path Strength 6.29614
Maximum Path Strength 30.895
Minimum Path Correlation 0.7
Average Path Correlation 0.926666
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 48.0037
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 59.4149
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21731
Sequence
>9GGG_nogp_Chain_R
PCFRPTNIT LEERRLIAS PWFAASFCV VGLASNLLA LSVLAGARQ 
GGSHTRSSF LTFLCGLVL TDFLGLLVT GTIVVSQHA ALFEWHAVD 
PGCRLCRFM GVVMIFFGL SPLLLGAAM ASERYLGIT RPFSRSQRR 
AWATVGLVW AAALALGLL PLLGVGRYT VQYPGSWCF LTLGAESGD 
VAFGLLFSM LGGLSVGLS FLLNTVSVA TLCHVYHGQ EAAQQRPRD 
SEVEMMAQL LGIMVVASV CWLPLLVFI AQTVLRNPP AMSPAGQLS 
RTTEKELLI YLRVATWNQ ILDPWVYIL FRRAVLRRL QP


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6IIUALipidProstanoidTXA2Homo sapiensRamatroban--2.52018-12-19doi.org/10.1038/s41589-018-0170-9
6IIVALipidProstanoidTXA2Homo sapiensDaltroban--32018-12-19doi.org/10.1038/s41589-018-0170-9
8XJNALipidProstanoidTXA2Homo sapiensCloprosetnol-chim(NtGi1-Gs-CtGq)/β1/γ23.062024-02-28doi.org/10.1016/j.celrep.2024.113893
8XJN (No Gprot) ALipidProstanoidTXA2Homo sapiensCloprosetnol-3.062024-02-28doi.org/10.1016/j.celrep.2024.113893
8XJOALipidProstanoidTXA2Homo sapiensU46619-chim(NtGi1-Gs-CtGq)/β1/γ23.112024-02-28doi.org/10.1016/j.celrep.2024.113893
8XJO (No Gprot) ALipidProstanoidTXA2Homo sapiensU46619-3.112024-02-28doi.org/10.1016/j.celrep.2024.113893
9GG5ALipidProstanoidTXA2Homo sapiensU46619-chim(NtGi2L-Gs-CtGq)/β1/γ23.262025-08-27To be published
9GG5 (No Gprot) ALipidProstanoidTXA2Homo sapiensU46619-3.262025-08-27To be published
9GGGALipidProstanoidTXA2Homo sapiensI-BOP-chim(NtGi2L-Gs-CtGq)/β1/γ23.252025-08-27To be published
9GGG (No Gprot) ALipidProstanoidTXA2Homo sapiensI-BOP-3.252025-08-27To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9GGG_nogp.zip



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