Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F45 5.425407
2R:R:L48 3.3625406
3R:R:N56 7.165409
4R:R:V63 2.6375408
5R:R:L69 7.614538
6R:R:P72 4.225426
7R:R:Y74 6.96838
8R:R:F75 3.6375404
9R:R:F76 3.28833627
10R:R:L80 5.148529
11R:R:D84 7.516509
12R:R:F120 4.654505
13R:R:L135 5.6425428
14R:R:I138 5.7225428
15R:R:Y143 13.24448
16R:R:F147 10.922546
17R:R:Y152 9.075408
18R:R:W169 3.84729
19R:R:F179 8.428583
20R:R:F196 13.3425417
21R:R:M199 4.39407
22R:R:M203 4.526528
23R:R:Y207 3.874529
24R:R:F211 3.698556
25R:R:F213 4.8025445
26R:R:I244 2.465407
27R:R:L247 3.9225428
28R:R:W255 7.46857718
29R:R:F259 11.42416
30R:R:H261 9.5925415
31R:R:I266 6.595413
32R:R:Y284 5.648515
33R:R:L285 5.8125413
34R:R:M289 4.7675416
35R:R:I298 4.02529
36R:R:Y299 5.464529
37R:R:F301 3.32506
38R:R:L306 3.625638
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F45 R:R:T95 22.94399.08YesNo075
2R:R:F45 R:R:M289 32.15734.98YesYes076
3R:R:E55 R:R:P296 16.38726.29NoNo079
4R:R:D295 R:R:P296 13.93783.22NoNo099
5R:R:D295 R:R:N291 12.939214.81NoNo099
6R:R:N291 R:R:W255 12.55313.56NoYes098
7R:R:F259 R:R:W255 79.34533.01YesYes168
8R:R:F258 R:R:F259 1002.14NoYes156
9R:R:F258 R:R:L285 65.0732.44NoYes153
10R:R:L285 R:R:M289 39.46772.83YesYes136
11R:R:D84 R:R:S131 48.9264.42YesNo099
12R:R:S131 R:R:W255 48.69054.94NoYes098
13R:R:E55 R:R:F301 13.7733.5NoYes076
14R:R:I138 R:R:L77 38.38912.85YesNo088
15R:R:I138 R:R:L80 31.58272.85YesYes289
16R:R:D84 R:R:L80 55.9358.14YesYes099
17R:R:V63 R:R:Y74 14.19222.52YesYes088
18R:R:L77 R:R:Y74 29.61852.34NoYes088
19R:R:F301 R:R:L306 13.172.44YesYes068
20R:R:L80 R:R:N134 28.56346.87YesNo298
21R:R:F76 R:R:I165 17.68253.77YesNo277
22R:R:N134 R:R:W169 17.7723.39NoYes289
23R:R:I165 R:R:W169 10.93742.35NoYes279
24R:R:L135 R:R:L80 12.86865.54YesYes289
25R:R:F120 R:R:M123 18.31842.49YesNo054
26R:R:E94 R:R:F120 18.43623.5NoYes055
27R:R:E94 R:R:T95 20.61718.47NoNo055
28R:R:I124 R:R:N91 36.51917.08NoNo046
29R:R:I124 R:R:S90 20.62657.74NoNo045
30R:R:F120 R:R:M97 14.64913.73YesNo054
31R:R:I119 R:R:N118 12.45419.91NoNo054
32R:R:I119 R:R:M116 14.91762.92NoNo055
33R:R:F120 R:R:M116 17.37167.46YesNo055
34R:R:D121 R:R:I124 17.14084.2NoNo044
35R:R:D121 R:R:F179 15.87859.55NoYes043
36R:R:I132 R:R:M199 42.68492.92NoYes077
37R:R:F196 R:R:I132 21.14933.77YesNo177
38R:R:F196 R:R:F259 21.554433.22YesYes176
39R:R:I132 R:R:W255 22.50128.22NoYes178
40R:R:L136 R:R:M203 28.01224.24NoYes078
41R:R:L136 R:R:M199 37.92757.07NoYes077
42R:R:L136 R:R:L202 14.06976.92NoNo075
43R:R:I138 R:R:R142 19.84937.52YesNo089
44R:R:M203 R:R:Y207 19.33112.39YesYes289
45R:R:L202 R:R:L206 11.89354.15NoNo056
46R:R:M210 R:R:R142 12.1622.48NoNo099
47R:R:L206 R:R:Y143 10.244911.72NoYes068
48R:R:F281 R:R:L285 11.37549.74NoYes133
49R:R:F281 R:R:H261 44.72929.05NoYes135
50R:R:H261 R:R:I265 20.386214.58YesNo153
51R:R:I265 R:R:I266 19.19924.42NoYes133
52R:R:F251 R:R:M200 13.20772.49NoNo086
53R:R:I244 R:R:Y207 25.30382.42YesYes079
54R:R:I244 R:R:V208 16.9763.07YesNo073
55R:R:L212 R:R:V208 14.87051.49NoNo033
56R:R:H261 R:R:Y284 23.17956.53YesYes155
57R:R:Y277 R:R:Y284 13.923711.91NoYes115
58R:R:L264 R:R:Y277 11.25298.21NoNo151
59R:R:F301 R:R:F310 10.61714.29YesNo067
60R:R:M123 R:R:S90 19.439510.73NoNo045
61R:R:L285 R:R:N91 36.15648.24YesNo136
62R:R:R142 R:R:Y207 10.13667.2NoYes099
63R:R:F258 R:R:F281 34.45123.22NoNo153
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 9K3F_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.28
Number of Linked Nodes 240
Number of Links 278
Number of Hubs 38
Number of Links mediated by Hubs 149
Number of Communities 8
Number of Nodes involved in Communities 68
Number of Links involved in Communities 93
Path Summary
Number Of Nodes in MetaPath 64
Number Of Links MetaPath 63
Number of Shortest Paths 40238
Length Of Smallest Path 3
Average Path Length 12.6366
Length of Longest Path 26
Minimum Path Strength 1.45
Average Path Strength 5.37193
Maximum Path Strength 20.265
Minimum Path Correlation 0.7
Average Path Correlation 0.939086
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 58.167
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.9705
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP41968
Sequence
>9K3F_nogp_Chain_R
CEQVFIKPE VFLSLGIVS LLENILVIL AVVRNGNLH SPMYFFLCS 
LAVADMLVS VSNALETIM IAIVHSDYL TFEDQFIQH MDNIFDSMI 
CISLVASIC NLLAIAVDR YVTIFYALR YHSIMTVRK ALTLIVAIW 
VCCGVCGVV FIVYSESKM VIVCLITMF FAMMLLMGT LYVHMFLFA 
RLHVKRIAA LPPSCMKGA VTITILLGV FIFCWAPFF LHLVLIITC 
PTNPYCICY TAHFNTYLV LIMCNSVID PLIYAFRSL ELRNTF


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8IOCAPeptideMelanocortinMC3Homo sapiensγ-MSHCachim(NtGi1-Gs)/β1/γ22.862023-09-20doi.org/10.1038/s41421-023-00586-4
8IOC (No Gprot) APeptideMelanocortinMC3Homo sapiensγ-MSHCa2.862023-09-20doi.org/10.1038/s41421-023-00586-4
8KIGAPeptideMelanocortinMC3Homo sapiensSHU9119Ca-3.12025-02-26doi.org/10.2210/pdb8KIG/pdb
8W8WAPeptideMelanocortinMC3Homo sapiensα-MSHCaGs/β1/γ22.92025-03-19To be published
8W8W (No Gprot) APeptideMelanocortinMC3Homo sapiensα-MSHCa2.92025-03-19To be published
8W8XAPeptideMelanocortinMC3Homo sapiensβ-MSHCaGs/β1/γ22.92025-03-19To be published
8W8X (No Gprot) APeptideMelanocortinMC3Homo sapiensβ-MSHCa2.92025-03-19To be published
8W8YAPeptideMelanocortinMC3Homo sapiensγ-MSHCaGs/β1/γ22.92025-03-19To be published
8W8Y (No Gprot) APeptideMelanocortinMC3Homo sapiensγ-MSHCa2.92025-03-19To be published
9K3FAPeptideMelanocortinMC3Homo sapiens--chim(NtGi1-Gs)/β1/γ22.752025-08-06doi.org/10.1016/j.str.2025.03.004
9K3F (No Gprot) APeptideMelanocortinMC3Homo sapiens--2.752025-08-06doi.org/10.1016/j.str.2025.03.004




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9K3F_nogp.zip



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