Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:N23 8.23418
2R:R:F25 11.284516
3R:R:Q27 7.6125424
4R:R:N50 6.3409
5R:R:W55 6.475434
6R:R:I56 4.51538
7R:R:H60 6.038535
8R:R:V66 6.23456
9R:R:F70 6.438507
10R:R:E78 9.0575469
11R:R:M81 4.5025407
12R:R:N85 6.315616
13R:R:N89 7.764516
14R:R:Y92 6.972514
15R:R:V94 6.6525425
16R:R:N96 7.38857714
17R:R:W98 8.28667618
18R:R:Y100 12.18417
19R:R:F107 7.135414
20R:R:H108 8.64857715
21R:R:F111 5.9125414
22R:R:P112 6.42416
23R:R:I113 5.49667615
24R:R:Y131 7.09548
25R:R:I135 7.23547
26R:R:H136 5.6725446
27R:R:R141 8.53455
28R:R:T147 6457
29R:R:W155 5.14667609
30R:R:Q165 8.844516
31R:R:W184 12.092515
32R:R:Y196 10.31516
33R:R:Y205 7.7725408
34R:R:Y216 8.302509
35R:R:M249 5.0775408
36R:R:M250 8.7525408
37R:R:W261 7.67667618
38R:R:F264 8.018517
39R:R:H265 8.27407
40R:R:F267 9.4504
41R:R:L277 3.35405
42R:R:Y287 8.686515
43R:R:M291 6.8925415
44R:R:W292 7.92405
45R:R:M295 5.8375417
46R:R:F312 6.008509
47L:L:F8 8.684510
48L:L:L10 6.5275410
49L:L:M11 8.4475410
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:N23 R:R:V26 23.12695.91YesNo081
2R:R:F25 R:R:N96 36.65368.46YesYes164
3R:R:H95 R:R:V26 20.98326.92NoNo051
4R:R:F25 R:R:Q284 1009.37YesNo064
5R:R:Q27 R:R:Q284 53.808110.24YesNo044
6R:R:Q27 R:R:V94 40.77094.3YesYes245
7R:R:Q284 R:R:Q285 44.60998.96NoNo041
8R:R:Q285 R:R:W35 42.39416.57NoNo014
9R:R:L288 R:R:W35 38.276818.22NoNo034
10R:R:F90 R:R:V94 52.19527.87NoYes065
11R:R:F90 R:R:Y39 46.269216.5NoNo067
12R:R:L288 R:R:Y39 33.97924.69NoNo037
13R:R:W292 R:R:Y39 74.59036.75YesNo057
14R:R:I42 R:R:W292 32.211717.62NoYes075
15L:L:F7 R:R:F25 72.668316.08NoYes106
16L:L:F7 R:R:Y287 88.42118.25NoYes105
17R:R:M291 R:R:Y287 39.668111.97YesYes155
18R:R:M291 R:R:M295 34.94285.78YesYes157
19R:R:I42 R:R:M299 26.8682.92NoNo077
20R:R:M299 R:R:T45 21.5147.53NoNo074
21R:R:M295 R:R:M81 74.80684.33YesYes077
22R:R:M81 R:R:T298 93.32684.52YesNo079
23R:R:S46 R:R:T298 16.78357.99NoNo089
24R:R:N50 R:R:S46 13.23824.47YesNo098
25R:R:E78 R:R:T298 76.3639.88YesNo099
26R:R:E78 R:R:N50 15.47467.89YesYes099
27R:R:N50 R:R:P302 11.83658.15YesNo099
28R:R:A79 R:R:N50 11.83654.69NoYes079
29R:R:E78 R:R:N301 56.863911.83YesNo699
30R:R:N301 R:R:Y305 58.935410.47NoNo099
31R:R:F312 R:R:Y305 55.8596.19YesNo099
32R:R:F312 R:R:I56 39.63216.28YesYes098
33R:R:I56 R:R:V52 10.74413.07YesNo086
34R:R:H60 R:R:I56 10.4045.3YesYes358
35R:R:I56 R:R:M63 14.92844.37YesNo387
36R:R:F312 R:R:I57 13.62983.77YesNo097
37R:R:M63 R:R:R311 12.95993.72NoNo076
38R:R:N96 R:R:Y92 51.56656.98YesYes144
39R:R:W98 R:R:Y92 25.04911.58YesYes184
40R:R:H108 R:R:W98 28.31084.23YesYes158
41R:R:H108 R:R:P112 54.354310.68YesYes156
42R:R:F111 R:R:P112 83.89675.78YesYes146
43R:R:F111 R:R:W155 80.01655.01YesYes049
44R:R:N73 R:R:W155 50.15467.91NoYes099
45R:R:I151 R:R:N73 46.037314.16NoNo089
46R:R:F70 R:R:I151 42.78063.77YesNo078
47R:R:D129 R:R:F70 10.34228.36NoYes097
48L:L:L10 R:R:Y92 57.35865.86YesYes104
49L:L:L10 R:R:H108 24.82745.14YesYes105
50R:R:N89 R:R:Y287 26.0958.14YesYes165
51R:R:H108 R:R:N89 13.222712.75YesYes156
52R:R:N85 R:R:N89 19.35485.45YesYes166
53R:R:N85 R:R:P112 38.84374.89YesYes166
54R:R:M291 R:R:N85 12.21274.21YesYes156
55R:R:F70 R:R:T147 23.45.19YesYes077
56R:R:N73 R:R:S122 12.45495.96NoNo098
57R:R:L74 R:R:S122 10.71324.5NoNo098
58R:R:F76 R:R:W155 13.68134.01NoYes069
59R:R:M81 R:R:V116 40.77614.56YesNo077
60L:L:?12 R:R:N85 26.785510.2NoYes106
61L:L:?12 R:R:H108 18.48916.36NoYes105
62L:L:F8 R:R:N96 12.77446.04YesYes104
63L:L:L10 R:R:N109 38.98798.24YesNo005
64R:R:N109 R:R:S169 18.71595.96NoNo055
65R:R:K106 R:R:S169 13.41859.18NoNo065
66R:R:K106 R:R:L102 10.75445.64NoNo063
67R:R:I113 R:R:N109 33.11354.25YesNo055
68R:R:L159 R:R:W155 10.25462.28NoYes049
69R:R:F117 R:R:I113 13.71745.02NoYes075
70R:R:I113 R:R:Q165 43.3685.49YesYes156
71R:R:F267 R:R:Y287 53.99889.28YesYes045
72R:R:F267 R:R:F268 42.811510.72YesNo046
73L:L:M11 R:R:F268 13.681312.44YesNo106
74L:L:M11 R:R:Q165 31.50069.52YesYes106
75R:R:F264 R:R:F268 29.222911.79YesNo176
76R:R:F264 R:R:W261 58.399511.02YesYes178
77R:R:F117 R:R:I204 10.079411.3NoNo076
78R:R:F264 R:R:H265 20.11755.66YesYes077
79R:R:F257 R:R:W261 64.17098.02NoYes198
80R:R:F257 R:R:P208 63.09394.33NoNo099
81R:R:P208 R:R:T124 60.46583.5NoNo097
82R:R:I212 R:R:T124 57.79666.08NoNo087
83R:R:I212 R:R:Y216 55.08613.63NoYes089
84R:R:I135 R:R:V219 21.46243.07YesNo078
85R:R:M250 R:R:V219 35.46336.09YesNo088
86R:R:M250 R:R:Y216 46.892721.55YesYes089
87R:R:I134 R:R:V219 13.542212.29NoNo088
88R:R:I134 R:R:L223 11.87784.28NoNo088
89R:R:Q165 R:R:Y196 45.460215.78YesYes166
90R:R:F163 R:R:P164 29.57334.33NoNo048
91R:R:P164 R:R:Y196 31.77378.34NoYes086
92R:R:F163 R:R:Y167 27.34217.22NoNo044
93R:R:Q165 R:R:W184 25.4566.57YesYes165
94R:R:Y167 R:R:Y168 25.100510.92NoNo045
95R:R:P185 R:R:Y168 18.308815.3NoNo045
96L:L:P4 R:R:M174 13.53713.35NoNo001
97L:L:P4 L:L:Q5 16.89686.32NoNo000
98L:L:K3 L:L:Q5 23.58556.78NoNo000
99L:L:K3 L:L:Q6 30.23294.07NoNo000
100L:L:F8 L:L:Q6 33.541214.05YesNo000
101R:R:E193 R:R:W184 12.934118.54NoYes045
102R:R:H197 R:R:W184 10.6054.23NoYes155
103R:R:H197 R:R:Y196 11.29037.62NoYes156
104R:R:H187 R:R:P185 13.96994.58NoNo024
105R:R:H187 R:R:I191 11.66656.63NoNo021
106R:R:H197 R:R:Y272 17.592515.24NoNo055
107R:R:H265 R:R:Y205 14.00089.8YesYes078
108R:R:L293 R:R:W292 32.21173.42NoYes075
109R:R:C260 R:R:L293 26.8684.76NoNo087
110R:R:C260 R:R:T256 21.5143.38NoNo086
111R:R:T256 R:R:Y300 10.7754.99NoNo065
112R:R:F267 R:R:I283 19.35485.02YesNo044
113R:R:I283 R:R:V286 17.52553.07NoNo045
114R:R:F282 R:R:V286 15.61892.62NoNo035
115R:R:F282 R:R:L277 11.77472.44NoYes035
116R:R:K194 R:R:Y272 20.20512.39NoNo035
117R:R:T45 R:R:V44 10.7751.59NoNo044
118R:R:I198 R:R:K194 13.48551.45NoNo053
119L:L:F7 R:R:N96 14.82538.46NoYes104
120R:R:N23 R:R:N96 21.34914.09YesYes184
121R:R:H95 R:R:V94 14.6458.3NoYes055
122L:L:L10 R:R:N89 14.47496.87YesYes106
123R:R:H108 R:R:N85 16.338.93YesYes156
124L:L:M11 R:R:I113 16.57224.37YesYes105
125L:L:?12 R:R:I113 43.398910.6NoYes105
126R:R:M295 R:R:N85 43.23924.21YesYes176
127L:L:F8 R:R:Y92 26.62584.13YesYes104
128R:R:V116 R:R:W261 40.18864.9NoYes078
129L:L:M11 R:R:F264 34.58217.46YesYes107
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:F25 R:R:N23 8.46 1 Yes Yes 6 8 1 2
R:R:N23 R:R:N96 4.09 1 Yes Yes 8 4 2 1
R:R:N23 R:R:R177 14.46 1 Yes No 8 2 2 2
R:R:F25 R:R:Q24 14.05 1 Yes No 6 3 1 2
R:R:F25 R:R:N96 8.46 1 Yes Yes 6 4 1 1
R:R:F25 R:R:Q284 9.37 1 Yes No 6 4 1 2
L:L:F7 R:R:F25 16.08 1 No Yes 0 6 0 1
R:R:N85 R:R:N89 5.45 1 Yes Yes 6 6 1 1
R:R:H108 R:R:N85 8.93 1 Yes Yes 5 6 1 1
R:R:N85 R:R:P112 4.89 1 Yes Yes 6 6 1 2
R:R:M291 R:R:N85 4.21 1 Yes Yes 5 6 2 1
R:R:M295 R:R:N85 4.21 1 Yes Yes 7 6 2 1
L:L:?12 R:R:N85 10.2 1 No Yes 0 6 0 1
R:R:H108 R:R:V88 12.45 1 Yes No 5 5 1 2
R:R:H108 R:R:N89 12.75 1 Yes Yes 5 6 1 1
R:R:N89 R:R:Y287 8.14 1 Yes Yes 6 5 1 1
R:R:M291 R:R:N89 5.61 1 Yes Yes 5 6 2 1
L:L:L10 R:R:N89 6.87 1 Yes Yes 0 6 0 1
R:R:N96 R:R:Y92 6.98 1 Yes Yes 4 4 1 1
R:R:W98 R:R:Y92 11.58 1 Yes Yes 8 4 2 1
R:R:V179 R:R:Y92 6.31 1 No Yes 3 4 1 1
L:L:F8 R:R:Y92 4.13 1 Yes Yes 0 4 0 1
L:L:L10 R:R:Y92 5.86 1 Yes Yes 0 4 0 1
R:R:N96 R:R:R177 13.26 1 Yes No 4 2 1 2
R:R:N96 R:R:V179 4.43 1 Yes No 4 3 1 1
L:L:F7 R:R:N96 8.46 1 No Yes 0 4 0 1
L:L:F8 R:R:N96 6.04 1 Yes Yes 0 4 0 1
R:R:H108 R:R:W98 4.23 1 Yes Yes 5 8 1 2
R:R:H108 R:R:P112 10.68 1 Yes Yes 5 6 1 2
L:L:L10 R:R:H108 5.14 1 Yes Yes 0 5 0 1
L:L:?12 R:R:H108 6.36 1 No Yes 0 5 0 1
R:R:I113 R:R:N109 4.25 1 Yes No 5 5 1 1
R:R:N109 R:R:S169 5.96 0 No No 5 5 1 2
L:L:L10 R:R:N109 8.24 1 Yes No 0 5 0 1
R:R:F117 R:R:I113 5.02 0 No Yes 7 5 2 1
R:R:I113 R:R:Q165 5.49 1 Yes Yes 5 6 1 1
L:L:M11 R:R:I113 4.37 1 Yes Yes 0 5 0 1
L:L:?12 R:R:I113 10.6 1 No Yes 0 5 0 1
R:R:I182 R:R:Q165 6.86 1 No Yes 4 6 2 1
R:R:Q165 R:R:W184 6.57 1 Yes Yes 6 5 1 2
R:R:Q165 R:R:Y196 15.78 1 Yes Yes 6 6 1 2
L:L:M11 R:R:Q165 9.52 1 Yes Yes 0 6 0 1
R:R:E172 R:R:M174 6.77 0 No No 3 1 1 1
L:L:P2 R:R:E172 6.29 0 No No 0 3 0 1
R:R:M174 R:R:P175 6.71 0 No No 1 2 1 2
L:L:F8 R:R:V179 10.49 1 Yes No 0 3 0 1
L:L:F8 R:R:M181 8.71 1 Yes No 0 4 0 1
R:R:I182 R:R:W184 17.62 1 No Yes 4 5 2 2
R:R:W184 R:R:Y196 13.5 1 Yes Yes 5 6 2 2
R:R:F264 R:R:W261 11.02 1 Yes Yes 7 8 1 2
R:R:A294 R:R:W261 7.78 1 No Yes 7 8 2 2
R:R:F264 R:R:H265 5.66 1 Yes Yes 7 7 1 2
R:R:F264 R:R:F268 11.79 1 Yes No 7 6 1 1
R:R:A294 R:R:F264 4.16 1 No Yes 7 7 2 1
L:L:M11 R:R:F264 7.46 1 Yes Yes 0 7 0 1
R:R:F267 R:R:F268 10.72 0 Yes No 4 6 2 1
R:R:F267 R:R:Y287 9.28 0 Yes Yes 4 5 2 1
L:L:M11 R:R:F268 12.44 1 Yes No 0 6 0 1
R:R:M291 R:R:Y287 11.97 1 Yes Yes 5 5 2 1
L:L:F7 R:R:Y287 8.25 1 No Yes 0 5 0 1
L:L:G9 R:R:Y287 5.79 0 No Yes 0 5 0 1
R:R:M291 R:R:M295 5.78 1 Yes Yes 5 7 2 2
L:L:Q5 R:R:L279 3.99 0 No No 0 2 0 1
L:L:P4 R:R:M174 3.35 0 No No 0 1 0 1
R:R:A162 R:R:I113 3.25 0 No Yes 7 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7P00_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 4.05
Number of Linked Nodes 278
Number of Links 326
Number of Hubs 49
Number of Links mediated by Hubs 176
Number of Communities 6
Number of Nodes involved in Communities 63
Number of Links involved in Communities 96
Path Summary
Number Of Nodes in MetaPath 130
Number Of Links MetaPath 129
Number of Shortest Paths 69573
Length Of Smallest Path 3
Average Path Length 14.254
Length of Longest Path 30
Minimum Path Strength 1.21
Average Path Strength 7.51551
Maximum Path Strength 20.675
Minimum Path Correlation 0.7
Average Path Correlation 0.924212
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.34783
Average % Of Corr. Nodes 47.3045
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.9407
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNH2
PDB ResiduesL:L:?12
Environment DetailsOpen EMBL-EBI Page
CodeNH2
NameAMINO GROUP
Synonyms
Identifier
FormulaH2 N
Molecular Weight16.023
SMILES
PubChem123329
Formal Charge0
Total Atoms3
Total Chiral Atoms0
Total Bonds2
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP25103
Sequence
>7P00_nogp_Chain_R
PNQFVQPAW QIVLWAAAY TVIVVTSVV GNVVVMWII LAHKRMRTV 
TNYFLVNLA FAEASMAAF NTVVNFTYA VHNEWYYGL FYCKFHNFF 
PIAAVFASI YSMTAVAFD RYMAIIHPL QPRLSATAT KVVICVIWV 
LALLLAFPQ GYYSTTETM PSRVVCMIE WPEHPNKIY EKVYHICVT 
VLIYFLPLL VIGYAYTVV GITLWAYHE QVSAKRKVV KMMIVVVCT 
FAICWLPFH IFFLLPYIN PDLYLKKFI QQVYLAIMW LAMSSTMYN 
PIIYCCLND RFRLGFKHA


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6HLLAPeptideTachykininNK1Homo sapiensCP99994--3.272019-01-16doi.org/10.1038/s41467-018-07939-8
6HLOAPeptideTachykininNK1Homo sapiensAprepitant--2.42019-01-16doi.org/10.1038/s41467-018-07939-8
6HLPAPeptideTachykininNK1Homo sapiensNetupitant--2.22019-01-16doi.org/10.1038/s41467-018-07939-8
6J20APeptideTachykininNK1Homo sapiensAprepitant--2.72019-03-06doi.org/10.1038/s41467-019-08568-5
6J21APeptideTachykininNK1Homo sapiensAprepitant--3.22019-03-06doi.org/10.1038/s41467-019-08568-5
7RMGAPeptideTachykininNK1Homo sapiensSubstance-P-chim(Gs-CtGq)/β1/γ232021-11-03doi.org/10.1038/s41589-021-00890-8
7RMG (No Gprot) APeptideTachykininNK1Homo sapiensSubstance-P-32021-11-03doi.org/10.1038/s41589-021-00890-8
7RMHAPeptideTachykininNK1Homo sapiensSubstance-P-Gs/β1/γ23.12021-11-03doi.org/10.1038/s41589-021-00890-8
7RMH (No Gprot) APeptideTachykininNK1Homo sapiensSubstance-P-3.12021-11-03doi.org/10.1038/s41589-021-00890-8
7RMIAPeptideTachykininNK1Homo sapiensSubstance-P-chim(Gs-CtGq)/β1/γ23.22021-11-03doi.org/10.1038/s41589-021-00890-8
7RMI (No Gprot) APeptideTachykininNK1Homo sapiensSubstance-P-3.22021-11-03doi.org/10.1038/s41589-021-00890-8
8U26APeptideTachykininNK1Homo sapiensProtachykinin-1-Gs/β1/γ22.52023-11-15doi.org/10.1038/s41592-023-02082-9
8U26 (No Gprot) APeptideTachykininNK1Homo sapiensProtachykinin-1-2.52023-11-15doi.org/10.1038/s41592-023-02082-9
6E59APeptideTachykininNK1Homo sapiensL-760735--3.42018-12-12doi.org/10.1073/pnas.1812717115
7P00APeptideTachykininNK1Homo sapiensSubstance-P-chim(NtGi1-Gs-CtGq)/β1/γ22.712021-12-15doi.org/10.1126/sciadv.abk2872
7P00 (No Gprot) APeptideTachykininNK1Homo sapiensSubstance-P-2.712021-12-15doi.org/10.1126/sciadv.abk2872
7P02APeptideTachykininNK1Homo sapiensProtachykinin-1-chim(NtGi1-Gs)/β1/γ22.872021-12-15doi.org/10.1126/sciadv.abk2872
7P02 (No Gprot) APeptideTachykininNK1Homo sapiensProtachykinin-1-2.872021-12-15doi.org/10.1126/sciadv.abk2872




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Download 7P00_nogp.zip



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