Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 6.343851310
2R:R:K50 8.6775407
3R:R:V58 3.5825408
4R:R:D65 5.71449
5R:R:S73 6.5825418
6R:R:W85 4.62833616
7R:R:I98 6.9275475
8R:R:L100 4.77507
9R:R:F101 6.2075407
10R:R:F102 6.6325477
11R:R:L104 4.955488
12R:R:Y118 6.99408
13R:R:Y127 10.1525468
14R:R:F150 5.925487
15R:R:R162 11.065434
16R:R:Y165 7.47403
17R:R:W169 8.37833615
18R:R:F171 3.885406
19R:R:D173 10.44435
20R:R:W174 5.4575405
21R:R:H181 5.645435
22R:R:Y188 5.2175487
23R:R:N203 4.8425429
24R:R:L210 2.596529
25R:R:E267 4.0475408
26R:R:L274 4.4825428
27R:R:C284 4.035409
28R:R:R291 7.728596
29R:R:N295 10.6375496
30R:R:R316 8.435417
31R:R:D325 6.4525449
32R:R:P326 3.98409
33R:R:W327 6.0025407
34R:R:Y329 6.288509
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:P322 1004.91YesNo009
2R:R:D65 R:R:P322 99.67258.05YesNo099
3R:R:D325 R:R:D65 82.04035.32YesYes499
4R:R:D325 R:R:Y329 83.07653.45YesYes099
5R:R:I328 R:R:Y329 16.02689.67NoYes089
6R:R:I328 R:R:V280 14.46984.61NoNo086
7R:R:C284 R:R:V280 12.92351.71YesNo096
8L:L:?1 R:R:S73 10.01347.86YesYes108
9R:R:D65 R:R:N35 20.31684.04YesNo099
10R:R:N35 R:R:P326 14.67926.52NoYes099
11R:R:P326 R:R:W327 25.21342.7YesYes097
12R:R:G34 R:R:W327 10.28194.22NoYes097
13R:R:D325 R:R:P326 21.40674.83YesYes099
14R:R:L66 R:R:N35 10.30346.87NoNo089
15R:R:M113 R:R:Y329 43.28054.79NoYes099
16R:R:M113 R:R:V58 23.5493.04NoYes098
17R:R:L42 R:R:V58 15.91412.98NoYes088
18R:R:L42 R:R:Y55 11.26448.21NoNo588
19R:R:L57 R:R:M113 20.53692.83NoNo089
20R:R:E116 R:R:L57 15.91952.65NoNo098
21L:L:?1 R:R:V72 13.86855.57YesNo007
22R:R:I98 R:R:V72 12.45646.14YesNo057
23L:L:?1 R:R:L312 27.84975.18YesNo106
24R:R:L312 R:R:W169 28.86983.42NoYes165
25R:R:T168 R:R:W169 33.4983.64NoYes165
26R:R:T168 R:R:T79 34.14233.14NoNo167
27R:R:T79 R:R:W85 27.37727.28NoYes176
28L:L:?1 R:R:I315 27.91953.2YesNo006
29R:R:I315 R:R:W169 27.624216.44NoYes065
30L:L:?1 R:R:L99 49.58393.11YesNo008
31R:R:F171 R:R:L99 49.29934.87YesNo068
32R:R:F171 R:R:L100 34.26043.65YesYes067
33R:R:I172 R:R:L100 25.64.28NoYes077
34R:R:F171 R:R:W174 46.04034.01YesYes065
35R:R:I172 R:R:W174 22.91013.52NoYes075
36R:R:L100 R:R:Y188 35.04438.21YesYes077
37R:R:L104 R:R:Y188 27.80137.03YesYes887
38R:R:L104 R:R:N147 31.29665.49YesNo088
39R:R:N147 R:R:S108 31.35034.47NoNo087
40R:R:L195 R:R:S108 29.88994.5NoNo087
41R:R:I110 R:R:Y329 47.98396.04NoYes089
42R:R:I110 R:R:T199 47.12483.04NoNo088
43R:R:C111 R:R:T199 29.38523.38NoNo078
44R:R:C111 R:R:L195 29.37453.17NoNo078
45R:R:S114 R:R:T199 59.21073.2NoNo098
46R:R:C202 R:R:S114 25.2945.16NoNo079
47R:R:N203 R:R:S114 35.39874.47YesNo099
48R:R:L274 R:R:N203 30.23364.12YesYes289
49R:R:C202 R:R:Y118 21.79334.03NoYes078
50R:R:H123 R:R:Y118 12.96117.62NoYes078
51R:R:L274 R:R:V206 26.86712.98YesNo289
52R:R:L210 R:R:V206 23.32352.98YesNo299
53R:R:R162 R:R:W174 17.43363YesYes045
54R:R:D173 R:R:R162 27.828221.44YesYes354
55R:R:D173 R:R:S160 10.46984.42YesNo053
56R:R:Q164 R:R:W169 19.210719.71NoYes075
57R:R:Q164 R:R:R162 17.51418.18NoYes074
58R:R:D173 R:R:T176 13.95978.67YesNo354
59R:R:P166 R:R:W169 11.51684.05NoYes165
60R:R:P166 R:R:Y165 12.429511.13NoYes063
61R:R:I172 R:R:S185 24.86444.64NoNo077
62R:R:N295 R:R:W174 32.84311.3YesYes065
63R:R:Q296 R:R:S185 22.8512.89NoNo067
64R:R:Q296 R:R:Y186 18.79197.89NoNo065
65R:R:F293 R:R:Y186 14.68994.13NoNo065
66R:R:N295 R:R:R291 25.35314.46YesYes966
67R:R:A314 R:R:R291 20.82682.77NoYes076
68R:R:A314 R:R:P287 14.68991.87NoNo079
69R:R:I286 R:R:P287 12.62283.39NoNo079
70R:R:E267 R:R:L210 16.30071.33YesYes089
71R:R:L331 R:R:W327 10.104712.53NoYes067
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:P24 6.14 1 Yes No 0 7 0 1
L:L:?1 R:R:M27 6.34 1 Yes No 0 8 0 1
L:L:?1 R:R:T69 4.41 1 Yes No 0 8 0 1
L:L:?1 R:R:V72 5.57 1 Yes No 0 7 0 1
L:L:?1 R:R:S73 7.86 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T76 6.61 1 Yes No 0 8 0 1
L:L:?1 R:R:Y80 7.01 1 Yes No 0 6 0 1
L:L:?1 R:R:L99 3.11 1 Yes No 0 8 0 1
L:L:?1 R:R:L312 5.18 1 Yes No 0 6 0 1
L:L:?1 R:R:I315 3.2 1 Yes No 0 6 0 1
L:L:?1 R:R:R316 10.9 1 Yes Yes 0 7 0 1
L:L:?1 R:R:S319 11.23 1 Yes No 0 8 0 1
L:L:?1 R:R:P322 4.91 1 Yes No 0 9 0 1
R:R:I23 R:R:P24 3.39 1 No No 6 7 2 1
R:R:I23 R:R:R316 10.02 1 No Yes 6 7 2 1
R:R:P24 R:R:R316 4.32 1 No Yes 7 7 1 1
R:R:F28 R:R:S73 11.89 0 No Yes 6 8 2 1
R:R:D65 R:R:P322 8.05 4 Yes No 9 9 2 1
R:R:S73 R:R:T69 4.8 1 Yes No 8 8 1 1
R:R:I98 R:R:V72 6.14 7 Yes No 5 7 2 1
R:R:F171 R:R:L99 4.87 0 Yes No 6 8 2 1
R:R:F171 R:R:W169 3.01 0 Yes Yes 6 5 2 2
R:R:L312 R:R:W169 3.42 1 No Yes 6 5 1 2
R:R:I315 R:R:W169 16.44 0 No Yes 6 5 1 2
R:R:L312 R:R:R316 8.5 1 No Yes 6 7 1 1
R:R:V21 R:R:Y80 2.52 0 No No 6 6 2 1
R:R:P74 R:R:S73 1.78 0 No Yes 9 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8GDB_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 252
Number of Links 273
Number of Hubs 34
Number of Links mediated by Hubs 132
Number of Communities 9
Number of Nodes involved in Communities 43
Number of Links involved in Communities 50
Path Summary
Number Of Nodes in MetaPath 72
Number Of Links MetaPath 71
Number of Shortest Paths 43049
Length Of Smallest Path 3
Average Path Length 12.4221
Length of Longest Path 27
Minimum Path Strength 1.21
Average Path Strength 5.45494
Maximum Path Strength 18.075
Minimum Path Correlation 0.7
Average Path Correlation 0.923959
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5.26316
Average % Of Corr. Nodes 50.8267
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.6453
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• positive regulation of cytosolic calcium ion concentration   • biological regulation   • regulation of biological quality   • developmental process   • multicellular organismal process   • cellular developmental process   • T-helper cell differentiation   • hemopoiesis   • cell activation   • cell development   • mononuclear cell differentiation   • lymphocyte activation   • lymphocyte differentiation   • CD4-positive, alpha-beta T cell differentiation   • leukocyte activation   • alpha-beta T cell differentiation   • T cell activation   • immune system process   • cell differentiation   • CD4-positive, alpha-beta T cell activation   • anatomical structure development   • alpha-beta T cell activation   • T cell differentiation   • cellular process   • leukocyte differentiation   • regulation of defense response   • regulation of biological process   • response to stimulus   • regulation of response to external stimulus   • defense response   • positive regulation of biological process   • response to external stimulus   • regulation of inflammatory response   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of inflammatory response   • regulation of response to stimulus   • regulation of response to stress   • response to stress   • positive regulation of defense response   • inflammatory response   • regulation of cytoskeleton organization   • regulation of cellular process   • regulation of cellular component organization   • regulation of actin filament-based process   • regulation of actin filament bundle assembly   • cellular component biogenesis   • cellular component organization   • cellular component assembly   • actin filament bundle organization   • actin filament-based process   • cellular component organization or biogenesis   • stress fiber assembly   • regulation of actin filament organization   • actin cytoskeleton organization   • actomyosin structure organization   • actin filament organization   • regulation of cellular component biogenesis   • regulation of organelle organization   • regulation of stress fiber assembly   • organelle organization   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • immune response   • cellular response to stimulus   • signaling   • intracellular signal transduction   • cell communication   • intracellular signaling cassette   • MAPK cascade   • ERK1 and ERK2 cascade   • signal transduction   • multicellular organism development   • skeletal system development   • animal organ development   • bone development   • system development   • negative regulation of inflammatory response   • negative regulation of response to stimulus   • negative regulation of biological process   • negative regulation of response to external stimulus   • negative regulation of defense response   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • negative regulation of cellular process   • cytokine production   • regulation of cytokine production   • regulation of multicellular organismal process   • negative regulation of macromolecule metabolic process   • regulation of biosynthetic process   • negative regulation of metabolic process   • negative regulation of cytokine production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • negative regulation of gene expression   • biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • regulation of macromolecule biosynthetic process   • metabolic process   • macromolecule metabolic process   • negative regulation of multicellular organismal process   • regulation of metabolic process   • response to mechanical stimulus   • response to abiotic stimulus   • negative regulation of locomotion   • regulation of cell motility   • negative regulation of eosinophil migration   • eosinophil migration   • eosinophil extravasation   • negative regulation of cellular extravasation   • cellular extravasation   • myeloid leukocyte migration   • regulation of cell migration   • cell migration   • regulation of immune system process   • cell motility   • negative regulation of eosinophil extravasation   • negative regulation of cell migration   • locomotion   • regulation of leukocyte migration   • regulation of eosinophil extravasation   • granulocyte migration   • regulation of eosinophil migration   • leukocyte migration   • negative regulation of leukocyte migration   • negative regulation of immune system process   • regulation of locomotion   • negative regulation of cell motility   • regulation of cellular extravasation   • cellular response to mechanical stimulus   • cellular response to abiotic stimulus   • cellular response to external stimulus   • cellular response to environmental stimulus   • JNK cascade   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • positive regulation of cellular process   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • positive regulation of cytokine production   • negative regulation of cellular component organization   • protein-containing complex organization   • negative regulation of protein-containing complex assembly   • negative regulation of integrin activation   • regulation of protein-containing complex assembly   • protein-containing complex assembly   • regulation of integrin activation   • integrin activation   • cellular anatomical structure   • membrane   • cell periphery   • plasma membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • cellular response to monoamine stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • molecular function regulator activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • cellular homeostasis   • chemical homeostasis   • homeostatic process   • glucose homeostasis   • carbohydrate homeostasis   • intracellular chemical homeostasis   • intracellular glucose homeostasis   • neuromuscular process   • regulation of system process   • skeletal muscle contraction   • muscle contraction   • muscle system process   • regulation of muscle system process   • striated muscle contraction   • multicellular organismal movement   • musculoskeletal movement   • regulation of striated muscle contraction   • regulation of muscle contraction   • regulation of skeletal muscle contraction   • sensory perception of smell   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to glucagon   • cellular response to glucagon stimulus   • response to pH   • cellular response to pH   • cellular response to acidic pH   • response to acidic pH   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • coagulation   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • adaptive thermogenesis   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of cell communication   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • positive regulation of establishment of protein localization   • localization   • establishment of localization in cell   • positive regulation of insulin secretion involved in cellular response to glucose stimulus   • positive regulation of insulin secretion   • intracellular protein localization   • regulation of peptide hormone secretion   • regulation of hormone levels   • positive regulation of peptide hormone secretion   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • cellular response to carbohydrate stimulus   • response to glucose   • positive regulation of protein localization   • insulin secretion involved in cellular response to glucose stimulus   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • positive regulation of secretion by cell   • hormone secretion   • protein localization to extracellular region   • positive regulation of protein transport   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • positive regulation of hormone secretion   • response to monosaccharide   • response to carbohydrate   • positive regulation of secretion   • signal release   • cellular response to hexose stimulus   • cellular response to monosaccharide stimulus   • positive regulation of peptide secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cellular response to glucose stimulus   • regulation of protein transport   • positive regulation of protein secretion   • peptide transport   • response to hexose   • positive regulation of transport   • regulation of cellular localization   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • regulation of insulin secretion involved in cellular response to glucose stimulus   • hormone transport   • regulation of cell communication   • insulin secretion   • positive regulation of signaling   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • serotonin receptor signaling pathway   • adenylate cyclase-activating serotonin receptor signaling pathway   • intracellular transport   • inflammatory response to antigenic stimulus   • negative regulation of inflammatory response to antigenic stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • regulation of immune response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • cell surface receptor signaling pathway   • bile acid signaling pathway   • adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway   • renal system process   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • endomembrane system   • trans-Golgi network
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeP2E
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeP2E
NameDinoprostone
SynonymsPGE2
Identifier
FormulaC20 H32 O5
Molecular Weight352.465
SMILES
PubChem5280360
Formal Charge0
Total Atoms57
Total Chiral Atoms4
Total Bonds57
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35408
Sequence
>8GDB_nogp_Chain_R
SPVTIPAVM FIFGVVGNL VAIVVLCKS RKEQKETTF YTLVCGLAV 
TDLLGTLLV SPVTIATYM KGQWPGGQP LCEYSTFIL LFFSLSGLS 
IICAMSVER YLAINHAYF YSHYVDKRL AGLTLFAVY ASNVLFCAL 
PNMGLGSSR LQYPDTWCF IDWTTNVTA HAAYSYMYA GFSSFLILA 
TVLCNVLVC GALLRMHRQ FMRRTGAEI QMVILLIAT SLVVLICSI 
PLVVRVFVN QLYQPSLER EVSKNPDLQ AIRIASVNP ILDPWIYIL 
LRKTVLSKA IEKI


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5YHLALipidProstanoidEP4Homo sapiensPubChem 135121352--4.22018-12-05doi.org/10.1038/s41589-018-0131-3
5YWYALipidProstanoidEP4Homo sapiensONO-AE3-208--3.22018-12-05doi.org/10.1038/s41589-018-0131-3
7D7MALipidProstanoidEP4Homo sapiensPGE2-Gs/β1/γ13.32020-11-18doi.org/10.1016/j.str.2020.11.007
7D7M (No Gprot) ALipidProstanoidEP4Homo sapiensPGE2-3.32020-11-18doi.org/10.1016/j.str.2020.11.007
8GCMALipidProstanoidEP4Homo sapiensL-902688-Gi1/β1/γ23.52024-01-03doi.org/10.1073/pnas.2216329120
8GCM (No Gprot) ALipidProstanoidEP4Homo sapiensL-902688-3.52024-01-03doi.org/10.1073/pnas.2216329120
8GCPALipidProstanoidEP4Homo sapiensPGE2-Gi1/β1/γ23.12024-01-03doi.org/10.1073/pnas.2216329120
8GCP (No Gprot) ALipidProstanoidEP4Homo sapiensPGE2-3.12024-01-03doi.org/10.1073/pnas.2216329120
8GD9ALipidProstanoidEP4Homo sapiensRivenprost-Gs/β1/γ23.22024-01-03doi.org/10.1073/pnas.2216329120
8GD9 (No Gprot) ALipidProstanoidEP4Homo sapiensRivenprost-3.22024-01-03doi.org/10.1073/pnas.2216329120
8GDAALipidProstanoidEP4Homo sapiensL902688-Gs/β1/γ23.32024-01-03doi.org/10.1073/pnas.2216329120
8GDA (No Gprot) ALipidProstanoidEP4Homo sapiensL902688-3.32024-01-03doi.org/10.1073/pnas.2216329120
8GDBALipidProstanoidEP4Homo sapiensPGE2-Gs/β1/γ23.12024-01-03doi.org/10.1073/pnas.2216329120
8GDB (No Gprot) ALipidProstanoidEP4Homo sapiensPGE2-3.12024-01-03doi.org/10.1073/pnas.2216329120
9JQYALipidProstanoidEP4Homo sapiensTG6-129--2.922025-10-22To be published
9JQZALipidProstanoidEP4Homo sapiensGrapiprant--2.652025-10-22To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8GDB_nogp.zip



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