Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.472671510
2R:R:F28 7.465406
3R:R:N35 7.21409
4R:R:L42 4.7875448
5R:R:S73 6.61418
6R:R:W85 4.29125836
7R:R:I98 6.0775405
8R:R:L100 6.4925407
9R:R:F102 6.045407
10R:R:Y118 6.6925408
11R:R:Y127 5.1775408
12R:R:Y144 5.6325408
13R:R:T168 4.686516
14R:R:W169 8.86333615
15R:R:F171 5.592516
16R:R:W174 9.135415
17R:R:T176 7.755404
18R:R:Y184 5.12558
19R:R:I196 3.3875427
20R:R:V200 4.2325426
21R:R:C284 3.675409
22R:R:R291 8.47406
23R:R:N295 11.06406
24R:R:L312 8.685416
25R:R:R316 6.496517
26R:R:D325 6.5025409
27R:R:Y329 4.588509
28R:R:I330 5.6625448
29R:R:L331 4.5475406
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:S73 10.11325.61YesYes108
2L:L:?1 R:R:P322 1003.68YesNo009
3R:R:N321 R:R:P322 12.95641.63NoNo099
4R:R:C284 R:R:N321 11.55876.3YesNo099
5R:R:D65 R:R:P322 98.921211.27NoNo099
6R:R:D65 R:R:N35 31.917912.12NoYes099
7R:R:G34 R:R:N35 18.42481.7NoYes099
8R:R:N35 R:R:P326 22.71358.15YesNo099
9R:R:D325 R:R:D65 76.55847.98YesNo099
10R:R:D325 R:R:P326 28.98446.44YesNo099
11R:R:G34 R:R:V37 13.45061.84NoNo096
12R:R:L331 R:R:V37 11.77132.98YesNo066
13R:R:A38 R:R:P326 39.97983.74NoNo099
14R:R:A38 R:R:I330 37.9713.25NoYes098
15R:R:I330 R:R:L42 25.43988.56YesYes488
16R:R:I39 R:R:L42 10.88912.85NoYes088
17R:R:C59 R:R:L42 13.03614.76NoYes068
18R:R:D325 R:R:Y329 69.7723.45YesYes099
19R:R:M113 R:R:Y329 36.36615.99NoYes099
20R:R:L57 R:R:M113 35.32447.07NoNo089
21R:R:E116 R:R:L57 34.12343.98NoNo098
22L:L:?1 R:R:V72 20.43375.57YesNo007
23R:R:I98 R:R:V72 19.14769.22YesNo057
24R:R:F102 R:R:I98 14.04586.28YesYes075
25R:R:F101 R:R:F102 10.34176.43NoYes077
26L:L:?1 R:R:T168 16.96874.41YesYes106
27R:R:T168 R:R:T79 22.86763.14YesNo067
28R:R:T79 R:R:W85 21.51788.49NoYes076
29L:L:?1 R:R:W169 75.63375.11YesYes105
30R:R:F171 R:R:W169 55.74213.01YesYes165
31R:R:F171 R:R:I172 13.604711.3YesNo067
32R:R:I172 R:R:L100 12.38247.14NoYes077
33R:R:F171 R:R:Y188 16.09714.13YesNo067
34R:R:L100 R:R:Y188 12.541910.55YesNo077
35R:R:L100 R:R:Y184 17.7183.52YesYes078
36R:R:I110 R:R:Y329 42.16933.63NoYes089
37R:R:I110 R:R:T199 20.24233.04NoNo088
38R:R:C111 R:R:T199 13.6263.38NoNo078
39R:R:I110 R:R:V281 23.7874.61NoNo088
40R:R:I196 R:R:V281 22.53811.54YesNo078
41R:R:I196 R:R:L107 13.97144.28YesNo278
42R:R:L107 R:R:S192 12.66943NoNo087
43R:R:E116 R:R:Y127 24.29195.61NoYes098
44R:R:L119 R:R:Y127 20.57182.34NoYes068
45R:R:H123 R:R:L119 19.26453.86NoNo076
46R:R:Q164 R:R:W169 29.632824.09NoYes175
47R:R:Q164 R:R:W174 28.65499.86NoYes175
48R:R:T175 R:R:W174 33.77274.85NoYes045
49R:R:D173 R:R:T175 29.07482.89NoNo054
50R:R:D173 R:R:T176 24.33442.89NoYes054
51R:R:F171 R:R:W174 31.84896.01YesYes165
52R:R:N295 R:R:W174 26.321915.82YesYes065
53R:R:S192 R:R:V289 11.30363.23NoNo077
54R:R:N295 R:R:R291 19.354813.26YesYes066
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:P24 12.28 1 Yes No 0 7 0 1
L:L:?1 R:R:T69 6.61 1 Yes No 0 8 0 1
L:L:?1 R:R:V72 5.57 1 Yes No 0 7 0 1
L:L:?1 R:R:S73 5.61 1 Yes Yes 0 8 0 1
L:L:?1 R:R:T76 9.92 1 Yes No 0 8 0 1
L:L:?1 R:R:Y80 5.26 1 Yes No 0 6 0 1
L:L:?1 R:R:L99 6.21 1 Yes No 0 8 0 1
L:L:?1 R:R:S103 6.74 1 Yes No 0 7 0 1
L:L:?1 R:R:T168 4.41 1 Yes Yes 0 6 0 1
L:L:?1 R:R:W169 5.11 1 Yes Yes 0 5 0 1
L:L:?1 R:R:L312 9.32 1 Yes Yes 0 6 0 1
L:L:?1 R:R:I315 3.2 1 Yes No 0 6 0 1
L:L:?1 R:R:R316 9.08 1 Yes Yes 0 7 0 1
L:L:?1 R:R:S319 19.09 1 Yes No 0 8 0 1
L:L:?1 R:R:P322 3.68 1 Yes No 0 9 0 1
R:R:V21 R:R:Y80 17.66 0 No No 6 6 2 1
R:R:I23 R:R:P24 3.39 0 No No 6 7 2 1
R:R:I23 R:R:R316 5.01 0 No Yes 6 7 2 1
R:R:P24 R:R:T76 3.5 1 No No 7 8 1 1
R:R:M27 R:R:R316 3.72 0 No Yes 8 7 2 1
R:R:F28 R:R:S73 15.85 0 Yes Yes 6 8 2 1
R:R:D65 R:R:P322 11.27 0 No No 9 9 2 1
R:R:S73 R:R:T69 3.2 1 Yes No 8 8 1 1
R:R:I98 R:R:V72 9.22 0 Yes No 5 7 2 1
R:R:T168 R:R:T79 3.14 1 Yes No 6 7 1 2
R:R:T168 R:R:Y80 8.74 1 Yes No 6 6 1 1
R:R:Q164 R:R:W169 24.09 1 No Yes 7 5 2 1
R:R:F171 R:R:Q164 3.51 1 Yes No 6 7 2 2
R:R:P166 R:R:T168 3.5 1 No Yes 6 6 2 1
R:R:P166 R:R:W169 6.76 1 No Yes 6 5 2 1
R:R:L312 R:R:P166 6.57 1 Yes No 6 6 1 2
R:R:T168 R:R:W169 3.64 1 Yes Yes 6 5 1 1
R:R:F171 R:R:W169 3.01 1 Yes Yes 6 5 2 1
R:R:I315 R:R:W169 10.57 1 No Yes 6 5 1 1
R:R:L312 R:R:N309 5.49 1 Yes No 6 2 1 2
R:R:L312 R:R:R316 13.36 1 Yes Yes 6 7 1 1
R:R:P74 R:R:S73 1.78 0 No Yes 9 8 2 1
R:R:N321 R:R:P322 1.63 0 No No 9 9 2 1
R:R:R316 R:R:V306 1.31 1 Yes No 7 3 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8GCP_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.98
Number of Linked Nodes 238
Number of Links 250
Number of Hubs 29
Number of Links mediated by Hubs 121
Number of Communities 5
Number of Nodes involved in Communities 31
Number of Links involved in Communities 42
Path Summary
Number Of Nodes in MetaPath 55
Number Of Links MetaPath 54
Number of Shortest Paths 35886
Length Of Smallest Path 3
Average Path Length 12.0504
Length of Longest Path 25
Minimum Path Strength 1.46
Average Path Strength 5.89412
Maximum Path Strength 17.33
Minimum Path Correlation 0.7
Average Path Correlation 0.917022
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 51.5836
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.6224
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • prostaglandin E receptor activity   • prostanoid receptor activity   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • icosanoid receptor activity   • prostaglandin receptor activity   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • cellular developmental process   • cell development   • mononuclear cell differentiation   • lymphocyte activation   • lymphocyte differentiation   • cell activation involved in immune response   • CD4-positive, alpha-beta T cell differentiation   • CD4-positive, alpha-beta T cell differentiation involved in immune response   • alpha-beta T cell differentiation involved in immune response   • leukocyte activation   • alpha-beta T cell differentiation   • T cell activation involved in immune response   • alpha-beta T cell activation involved in immune response   • T cell activation   • cell differentiation   • CD4-positive, alpha-beta T cell activation   • leukocyte activation involved in immune response   • alpha-beta T cell activation   • T cell differentiation   • lymphocyte activation involved in immune response   • T-helper cell differentiation   • immune response   • hemopoiesis   • cell activation   • T cell differentiation involved in immune response   • immune effector process   • immune system process   • leukocyte differentiation   • regulation of defense response   • regulation of response to external stimulus   • defense response   • positive regulation of biological process   • response to external stimulus   • regulation of inflammatory response   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of inflammatory response   • regulation of response to stimulus   • regulation of response to stress   • response to stress   • positive regulation of defense response   • inflammatory response   • regulation of cytoskeleton organization   • regulation of cellular component organization   • regulation of actin filament-based process   • regulation of actin filament bundle assembly   • cellular component biogenesis   • cellular component organization   • cellular component assembly   • actin filament bundle organization   • actin filament-based process   • cellular component organization or biogenesis   • stress fiber assembly   • regulation of actin filament organization   • actin cytoskeleton organization   • actomyosin structure organization   • actin filament organization   • regulation of cellular component biogenesis   • regulation of organelle organization   • regulation of stress fiber assembly   • organelle organization   • contractile actin filament bundle assembly   • regulation of actomyosin structure organization   • regulation of actin cytoskeleton organization   • actin filament bundle assembly   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • cytoskeleton organization   • MAPK cascade   • ERK1 and ERK2 cascade   • skeletal system development   • bone development   • negative regulation of inflammatory response   • negative regulation of response to stimulus   • negative regulation of biological process   • negative regulation of response to external stimulus   • negative regulation of defense response   • ossification   • regulation of multicellular organismal process   • regulation of ossification   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to external biotic stimulus   • response to nematode   • response to biotic stimulus   • negative regulation of cellular process   • cytokine production   • regulation of cytokine production   • negative regulation of macromolecule metabolic process   • regulation of biosynthetic process   • negative regulation of metabolic process   • negative regulation of cytokine production   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of gene expression   • negative regulation of gene expression   • biosynthetic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • regulation of macromolecule biosynthetic process   • metabolic process   • macromolecule metabolic process   • negative regulation of multicellular organismal process   • regulation of metabolic process   • response to mechanical stimulus   • response to abiotic stimulus   • negative regulation of locomotion   • regulation of cell motility   • negative regulation of eosinophil migration   • eosinophil migration   • eosinophil extravasation   • negative regulation of cellular extravasation   • cellular extravasation   • myeloid leukocyte migration   • regulation of cell migration   • cell migration   • regulation of immune system process   • cell motility   • negative regulation of eosinophil extravasation   • negative regulation of cell migration   • locomotion   • regulation of leukocyte migration   • regulation of eosinophil extravasation   • granulocyte migration   • regulation of eosinophil migration   • leukocyte migration   • negative regulation of leukocyte migration   • negative regulation of immune system process   • regulation of locomotion   • negative regulation of cell motility   • regulation of cellular extravasation   • cellular response to mechanical stimulus   • cellular response to abiotic stimulus   • cellular response to external stimulus   • cellular response to environmental stimulus   • JNK cascade   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • positive regulation of macromolecule metabolic process   • positive regulation of cellular process   • positive regulation of gene expression   • positive regulation of multicellular organismal process   • positive regulation of cytokine production   • negative regulation of cellular component organization   • protein-containing complex organization   • negative regulation of protein-containing complex assembly   • negative regulation of integrin activation   • regulation of protein-containing complex assembly   • protein-containing complex assembly   • regulation of integrin activation   • integrin activation   • response to lipopolysaccharide   • response to bacterium   • response to molecule of bacterial origin
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeP2E
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeP2E
NameDinoprostone
SynonymsDinoprostona
Identifier
FormulaC20 H32 O5
Molecular Weight352.465
SMILES
PubChem5280360
Formal Charge0
Total Atoms57
Total Chiral Atoms4
Total Bonds57
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35408
Sequence
>8GCP_nogp_Chain_R
PVTIPAVMF IFGVVGNLV AIVVLCKSQ KETTFYTLV CGLAVTDLL 
GTLLVSPVT IATYMKGQW PGGQPLCEY STFILLFFS LSGLSIICA 
MSVERYLAI NHAYFYSHY VDKRLAGLT LFAVYASNV LFCALPNMG 
LGSSRLQYP DTWCFIDWT TNVTAHAAY SYMYAGFSS FLILATVLC 
NVLVCGALL RMHRQFMRR AEIQMVILL IATSLVVLI CSIPLVVRV 
FVNQLYQPS LEREVSKNP DLQAIRIAS VNPILDPWI YILLRKTVL 
S


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8GCPALipidProstanoidEP4Homo sapiensPGE2-Gi1/β1/γ23.12024-01-0310.1073/pnas.2216329120
8GCP (No Gprot) ALipidProstanoidEP4Homo sapiensPGE2-3.12024-01-0310.1073/pnas.2216329120
8GCMALipidProstanoidEP4Homo sapiensL902688-Gi1/β1/γ23.52024-01-0310.1073/pnas.2216329120
8GCM (No Gprot) ALipidProstanoidEP4Homo sapiensL902688-3.52024-01-0310.1073/pnas.2216329120
8GDBALipidProstanoidEP4Homo sapiensPGE2-Gs/β1/γ23.12024-01-0310.1073/pnas.2216329120
8GDB (No Gprot) ALipidProstanoidEP4Homo sapiensPGE2-3.12024-01-0310.1073/pnas.2216329120
8GDAALipidProstanoidEP4Homo sapiensL902688-Gs/β1/γ23.32024-01-0310.1073/pnas.2216329120
8GDA (No Gprot) ALipidProstanoidEP4Homo sapiensL902688-3.32024-01-0310.1073/pnas.2216329120
8GD9ALipidProstanoidEP4Homo sapiensRivenprost-Gs/β1/γ23.22024-01-0310.1073/pnas.2216329120
8GD9 (No Gprot) ALipidProstanoidEP4Homo sapiensRivenprost-3.22024-01-0310.1073/pnas.2216329120
7D7MALipidProstanoidEP4Homo sapiensDinoprostone-Gs/β1/γ13.32020-11-1810.1016/j.str.2020.11.007
7D7M (No Gprot) ALipidProstanoidEP4Homo sapiensDinoprostone-3.32020-11-1810.1016/j.str.2020.11.007
5YWYALipidProstanoidEP4Homo sapiensONO-AE3-208--3.22018-12-0510.1038/s41589-018-0131-3
5YHLALipidProstanoidEP4Homo sapiensPubChem 135121352--4.22018-12-0510.1038/s41589-018-0131-3




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8GCP_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.