Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:M26 3.9675406
2R:R:L28 7.3975446
3R:R:L43 4.6225416
4R:R:G44 1.8075417
5R:R:I58 3.37408
6R:R:L64 8.485428
7R:R:Y70 10.868528
8R:R:F72 6.9825408
9R:R:F81 5.1525407
10R:R:F87 8.41416
11R:R:F94 6.255403
12R:R:H95 7.075404
13R:R:F106 8.13409
14R:R:M115 5405
15R:R:T116 3.1225407
16R:R:F117 6.77416
17R:R:L126 5.6175406
18R:R:D130 5.9975409
19R:R:Y132 6.415468
20R:R:Y137 9.1625405
21R:R:L154 6.255458
22R:R:W158 5.2775459
23R:R:L182 5.01404
24R:R:F183 10.89416
25R:R:I186 3.76415
26R:R:Y190 5.7425407
27R:R:W194 5.725615
28R:R:F202 5.192517
29R:R:Y209 7.956509
30R:R:K215 4.6525466
31R:R:L239 3.06405
32R:R:L254 3.15419
33R:R:C257 3.595478
34R:R:W258 6.44618
35R:R:M265 5.21406
36R:R:L273 5.9325401
37R:R:F281 6.59286714
38R:R:M286 4.6725405
39R:R:L289 3.7425416
40R:R:I298 3.98409
41R:R:Y299 6.74333619
42R:R:E305 7.7025426
43R:R:I306 4.53428
44L:L:?1 8.709171210
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F94 R:R:M26 16.85196.22YesYes036
2L:L:?1 R:R:F94 24.11413.45YesYes003
3R:R:H98 R:R:M26 11.92425.25NoYes046
4R:R:E181 R:R:L182 10.79195.3NoYes044
5R:R:F281 R:R:L182 26.90996.09YesYes044
6L:L:?1 R:R:F281 30.341810.36YesYes104
7R:R:H95 R:R:L28 10.65219YesYes046
8R:R:F91 R:R:H95 12.979712.44NoYes064
9R:R:F91 R:R:M286 14.62923.73NoYes065
10R:R:L289 R:R:M286 26.68624.24YesYes065
11R:R:F87 R:R:L289 44.59364.87YesYes166
12L:L:?1 R:R:F87 25.658815.54YesYes106
13R:R:C40 R:R:M286 12.47646.48NoYes065
14R:R:L289 R:R:L43 11.4354.15YesYes166
15R:R:L43 R:R:M293 10.41458.48YesNo066
16R:R:G44 R:R:L289 11.75651.71YesYes176
17L:L:?1 R:R:F117 56.53184.32YesYes106
18R:R:F117 R:R:W258 74.04779.02YesYes168
19R:R:N291 R:R:W258 32.77426.78NoYes098
20R:R:N291 R:R:N295 16.25788.17NoNo099
21R:R:D80 R:R:N295 14.29379.42NoNo099
22R:R:D80 R:R:N51 10.477412.12NoNo099
23R:R:I58 R:R:I73 41.87462.94YesNo088
24R:R:I73 R:R:T127 43.55213.04NoNo089
25R:R:T127 R:R:Y299 38.06534.99NoYes199
26R:R:L124 R:R:Y299 92.72388.21NoYes189
27R:R:L124 R:R:L254 1004.15NoYes189
28R:R:L254 R:R:W258 75.1873.42YesYes198
29R:R:L64 R:R:S61 11.73559.01YesNo087
30R:R:I58 R:R:L64 31.74675.71YesYes088
31R:R:L64 R:R:Y70 13.482915.24YesYes288
32R:R:D130 R:R:F72 12.61623.58YesYes098
33R:R:F72 R:R:L126 20.479510.96YesYes086
34R:R:L126 R:R:M157 22.32474.24YesNo066
35R:R:M157 R:R:S161 24.71523.07NoNo068
36R:R:S161 R:R:T118 32.27793.2NoNo086
37R:R:T118 R:R:W194 40.12727.28NoYes065
38L:L:?1 R:R:W194 35.31145.65YesYes105
39R:R:F72 R:R:L71 16.60033.65YesNo084
40R:R:L151 R:R:L71 11.19034.15NoNo014
41R:R:L76 R:R:S123 23.24047.51NoNo098
42R:R:T116 R:R:V86 10.98063.17YesNo074
43R:R:V113 R:R:V86 13.32914.81NoNo054
44R:R:L108 R:R:V105 15.80352.98NoNo044
45R:R:L108 R:R:S112 26.06423NoNo044
46R:R:S112 R:R:Y166 28.59446.36NoNo044
47R:R:M115 R:R:Y166 33.58510.78YesNo054
48R:R:M115 R:R:S165 35.91954.6YesNo057
49R:R:S165 R:R:T114 38.10027.99NoNo074
50L:L:?1 R:R:T114 22.331710.45YesNo104
51L:L:?1 R:R:I186 17.03363.04YesYes105
52R:R:W194 R:R:Y190 11.91724.82YesYes057
53R:R:I198 R:R:W194 31.78167.05NoYes175
54R:R:F202 R:R:I198 26.8683.77YesNo177
55R:R:R131 R:R:Y299 62.668611.32NoYes199
56R:R:R131 R:R:Y209 68.52597.2NoYes099
57R:R:L247 R:R:Y209 61.396514.07NoYes089
58R:R:L247 R:R:V212 56.78342.98NoNo089
59R:R:L135 R:R:V212 55.21772.98NoNo099
60R:R:K215 R:R:L135 26.58142.82YesNo069
61R:R:K215 R:R:R136 13.4418.66YesNo666
62R:R:R136 R:R:Y137 11.735526.75NoYes065
63R:R:I186 R:R:P187 15.84543.39YesNo054
64R:R:N188 R:R:S180 10.22585.96NoNo044
65R:R:L191 R:R:S180 12.7493NoNo054
66R:R:L191 R:R:M265 15.65674.24NoYes056
67R:R:M265 R:R:W194 16.53743.49YesYes065
68R:R:L182 R:R:L273 15.4264.15YesYes041
69R:R:L239 R:R:L243 26.59542.77YesNo057
70R:R:A216 R:R:L243 28.37771.58NoNo087
71R:R:A216 R:R:L135 30.16011.58NoNo089
72R:R:I298 R:R:Y299 15.47492.42YesYes099
73R:R:C257 R:R:N291 15.71966.3YesNo089
74R:R:F117 R:R:F87 18.99775.36YesYes166
75R:R:S123 R:R:S75 21.99623.26NoNo089
76R:R:L154 R:R:S75 16.55139.01YesNo589
77R:R:F72 R:R:L154 15.80359.74YesYes088
78R:R:L76 R:R:Y299 17.96324.69NoYes199
79R:R:F202 R:R:L254 25.84053.65YesYes179
80R:R:T114 R:R:W194 17.75356.06NoYes145
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:P184 R:R:Y25 18.08 0 No No 5 4 1 2
R:R:F94 R:R:M26 6.22 0 Yes Yes 3 6 1 2
R:R:V113 R:R:V86 4.81 1 No No 5 4 1 2
R:R:F87 R:R:V113 7.87 1 Yes No 6 5 1 1
R:R:F117 R:R:F87 5.36 1 Yes Yes 6 6 1 1
R:R:F87 R:R:L289 4.87 1 Yes Yes 6 6 1 2
L:L:?1 R:R:F87 15.54 1 Yes Yes 0 6 0 1
R:R:F106 R:R:F94 12.86 0 Yes Yes 9 3 2 1
L:L:?1 R:R:F94 3.45 1 Yes Yes 0 3 0 1
R:R:F106 R:R:I110 8.79 0 Yes No 9 4 2 1
R:R:F106 R:R:P184 7.22 0 Yes No 9 5 2 1
L:L:?1 R:R:I110 8.09 1 Yes No 0 4 0 1
L:L:?1 R:R:V113 3.17 1 Yes No 0 5 0 1
R:R:S165 R:R:T114 7.99 0 No No 7 4 2 1
R:R:T114 R:R:W194 6.06 1 No Yes 4 5 1 1
L:L:?1 R:R:T114 10.45 1 Yes No 0 4 0 1
R:R:F117 R:R:W258 9.02 1 Yes Yes 6 8 1 2
R:R:C288 R:R:F117 8.38 1 No Yes 7 6 2 1
L:L:?1 R:R:F117 4.32 1 Yes Yes 0 6 0 1
R:R:T118 R:R:W194 7.28 0 No Yes 6 5 2 1
R:R:F281 R:R:L182 6.09 1 Yes Yes 4 4 1 2
R:R:F183 R:R:I186 3.77 1 Yes Yes 6 5 1 1
R:R:F183 R:R:M265 7.46 1 Yes Yes 6 6 1 2
R:R:F183 R:R:F281 6.43 1 Yes Yes 6 4 1 1
L:L:?1 R:R:F183 25.9 1 Yes Yes 0 6 0 1
L:L:?1 R:R:P184 8.15 1 Yes No 0 5 0 1
R:R:I186 R:R:P187 3.39 1 Yes No 5 4 1 2
R:R:I186 R:R:Y190 4.84 1 Yes Yes 5 7 1 2
L:L:?1 R:R:I186 3.04 1 Yes Yes 0 5 0 1
R:R:W194 R:R:Y190 4.82 1 Yes Yes 5 7 1 2
R:R:I198 R:R:W194 7.05 1 No Yes 7 5 2 1
R:R:M265 R:R:W194 3.49 0 Yes Yes 6 5 2 1
L:L:?1 R:R:W194 5.65 1 Yes Yes 0 5 0 1
R:R:C288 R:R:W258 7.84 1 No Yes 7 8 2 2
R:R:F281 R:R:V261 5.24 1 Yes No 4 6 1 2
R:R:F281 R:R:L264 7.31 1 Yes No 4 4 1 2
R:R:F281 R:R:S285 7.93 1 Yes No 4 5 1 1
L:L:?1 R:R:F281 10.36 1 Yes Yes 0 4 0 1
L:L:?1 R:R:S285 6.39 1 Yes No 0 5 0 1
R:R:C284 R:R:F281 2.79 0 No Yes 4 4 2 1
R:R:F94 R:R:M22 2.49 0 Yes No 3 7 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8GUR_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3
Number of Linked Nodes 260
Number of Links 291
Number of Hubs 44
Number of Links mediated by Hubs 156
Number of Communities 7
Number of Nodes involved in Communities 46
Number of Links involved in Communities 61
Path Summary
Number Of Nodes in MetaPath 81
Number Of Links MetaPath 80
Number of Shortest Paths 39145
Length Of Smallest Path 3
Average Path Length 12.0204
Length of Longest Path 29
Minimum Path Strength 1.31
Average Path Strength 5.8533
Maximum Path Strength 18.005
Minimum Path Correlation 0.7
Average Path Correlation 0.923415
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 51.4723
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.2593
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code9GF
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code9GF
Name2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol
Synonyms
Identifier
FormulaC24 H40 O3
Molecular Weight376.573
SMILES
PubChem104895
Formal Charge0
Total Atoms67
Total Chiral Atoms3
Total Bonds68
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP34972
Sequence
>8GUR_nogp_Chain_R
MKDYMILSG PQKTAVAVL CTLLGLLSA LENVAVLYL ILSSHQLRR 
KPSYLFIGS LAGADFLAS VVFACSFVN FHVFHGVDS KAVFLLKIG 
SVTMTFTAS VGSLLLTAI DRYLCLRYP PSYKALLTR GRALVTLGI 
MWVLSALVS YLPLMGWTC CPRPCSELF PLIPNDYLL SWLLFIAFL 
FSGIIYTYG HVLWKAHQH VASLSGHQM RLDVRLAKT LGLVLAVLL 
ICWFPVLAL MAHSLATTL SDQVKKAFA FCSMLCLIN SMVNPVIYA 
LRSGEIRSS AHH


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5ZTYALipidCannabinoidCB2Homo sapiensAM10257--2.82019-01-30doi.org/10.1016/j.cell.2018.12.011
6KPCALipidCannabinoidCB2Homo sapiensAM12033--3.22020-02-12doi.org/10.1016/j.cell.2020.01.008
6KPFALipidCannabinoidCB2Homo sapiensAM12033-Gi1/β1/γ22.92020-02-12doi.org/10.1016/j.cell.2020.01.008
6KPF (No Gprot) ALipidCannabinoidCB2Homo sapiensAM12033-2.92020-02-12doi.org/10.1016/j.cell.2020.01.008
6PT0ALipidCannabinoidCB2Homo sapiensWIN 55212-2-Gi1/β1/γ23.22020-02-12doi.org/10.1016/j.cell.2020.01.007
6PT0 (No Gprot) ALipidCannabinoidCB2Homo sapiensWIN 55212-2-3.22020-02-12doi.org/10.1016/j.cell.2020.01.007
8GUQALipidCannabinoidCB2Homo sapiensOlorinab-Gi1/β1/γ23.082023-05-10doi.org/10.1038/s41467-023-37112-9
8GUQ (No Gprot) ALipidCannabinoidCB2Homo sapiensOlorinab-3.082023-05-10doi.org/10.1038/s41467-023-37112-9
8GURALipidCannabinoidCB2Homo sapiensCP55940-Gi1/β1/γ22.842023-05-10doi.org/10.1038/s41467-023-37112-9
8GUR (No Gprot) ALipidCannabinoidCB2Homo sapiensCP55940-2.842023-05-10doi.org/10.1038/s41467-023-37112-9
8GUSALipidCannabinoidCB2Homo sapiensHU-308-Gi1/β1/γ22.972023-05-10doi.org/10.1038/s41467-023-37112-9
8GUS (No Gprot) ALipidCannabinoidCB2Homo sapiensHU-308-2.972023-05-10doi.org/10.1038/s41467-023-37112-9
8GUTALipidCannabinoidCB2Homo sapiensLEI-102-Gi1/β1/γ22.982023-05-10doi.org/10.1038/s41467-023-37112-9
8GUT (No Gprot) ALipidCannabinoidCB2Homo sapiensLEI-102-2.982023-05-10doi.org/10.1038/s41467-023-37112-9
8X3LALipidCannabinoidCB2Homo sapiensXWD-Gi1/β1/γ23.132024-11-20doi.org/10.1073/pnas.2401091121
8X3L (No Gprot) ALipidCannabinoidCB2Homo sapiensXWD-3.132024-11-20doi.org/10.1073/pnas.2401091121




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8GUR_nogp.zip



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