Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?4 5.986500
2L:L:H6 8.536510
3L:L:?7 9.48625810
4L:L:R8 11.2067610
5L:L:W9 7.326510
6R:R:D42 4.8225413
7R:R:L69 8.555408
8R:R:Y74 8.216508
9R:R:F76 3.92407
10R:R:D84 6.375409
11R:R:N91 5.8575407
12R:R:L113 2.1175406
13R:R:D121 10.26515
14R:R:T124 7.7325415
15R:R:M128 4.875415
16R:R:F134 9.534528
17R:R:L135 5.22418
18R:R:F147 13.315446
19R:R:Y152 8.5625408
20R:R:W169 9.3475429
21R:R:F179 6.04505
22R:R:I180 5.052515
23R:R:L189 5.415414
24R:R:F196 10.3125407
25R:R:Y207 6.924538
26R:R:L211 2.438506
27R:R:F250 6.824518
28R:R:W254 8.8075817
29R:R:F257 8.604505
30R:R:F258 12.67405
31R:R:H260 10.9425404
32R:R:F277 9.9425403
33R:R:F280 10.0725404
34R:R:F283 6.65405
35R:R:I287 5.78417
36R:R:N290 8.5575419
37R:R:Y298 6.416509
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?4 R:R:V97 35.06492.79YesNo004
2R:R:L116 R:R:V97 32.32612.98NoNo034
3R:R:L113 R:R:L116 26.5711.38YesNo063
4L:L:?4 R:R:D117 41.904112.73YesNo006
5L:L:H6 R:R:E94 11.62027.39YesNo104
6R:R:D117 R:R:D121 18.56939.31NoYes165
7L:L:?7 L:L:R8 20.391711.32YesYes100
8L:L:R8 R:R:D117 25.90075.96YesNo106
9L:L:?7 R:R:D121 22.559718.4YesYes105
10L:L:?7 R:R:T124 11.269411.24YesYes105
11L:L:?7 R:R:M128 48.50754.79YesYes105
12L:L:?7 R:R:F257 24.26166.19YesYes005
13R:R:F257 R:R:F280 77.5666.43YesYes054
14R:R:F277 R:R:H260 53.14218.1YesYes034
15R:R:F280 R:R:H260 76.057813.58YesYes044
16R:R:F277 R:R:G274 12.77236.02YesNo032
17R:R:F283 R:R:H260 22.24556.79YesYes054
18R:R:I288 R:R:N91 26.93765.66NoYes067
19R:R:G49 R:R:I288 11.05473.53NoNo066
20R:R:I288 R:R:S52 14.65754.64NoNo068
21R:R:M128 R:R:W254 70.03565.82YesYes157
22R:R:S131 R:R:W254 22.98914.94NoYes097
23R:R:D84 R:R:S131 21.91037.36YesNo099
24R:R:D84 R:R:N56 25.16238.08YesNo099
25R:R:N56 R:R:P295 22.19846.52NoNo099
26R:R:P295 R:R:V59 19.25533.53NoNo099
27R:R:F300 R:R:V59 14.95082.62NoNo059
28R:R:L135 R:R:W254 86.77734.56YesYes187
29R:R:L135 R:R:L80 49.78015.54YesNo089
30R:R:I138 R:R:L80 46.20864.28NoNo099
31R:R:I138 R:R:I77 1002.94NoNo097
32R:R:I63 R:R:I77 97.42882.94NoNo087
33R:R:L135 R:R:Y298 53.79664.69YesYes089
34R:R:I138 R:R:Y298 60.20114.84NoYes099
35R:R:I63 R:R:L69 89.71517.14NoYes088
36R:R:L69 R:R:N66 15.05039.61YesNo088
37R:R:L69 R:R:Y74 69.422910.55YesYes088
38R:R:M73 R:R:Y74 59.761213.17NoYes088
39R:R:D141 R:R:M73 56.86014.16NoNo098
40R:R:D141 R:R:F76 27.26755.97NoYes097
41R:R:A161 R:R:F76 18.43844.16NoYes067
42R:R:A161 R:R:P72 15.39073.74NoNo067
43R:R:L158 R:R:P72 12.33246.57NoNo037
44R:R:C125 R:R:I180 26.03696.55NoYes045
45R:R:C125 R:R:S176 24.81156.89NoNo047
46R:R:S126 R:R:S176 14.21244.89NoNo057
47R:R:S126 R:R:S172 13.01844.89NoNo057
48R:R:S130 R:R:S172 45.14566.52NoNo077
49R:R:S130 R:R:S83 20.10374.89NoNo278
50R:R:F134 R:R:S83 17.62677.93YesNo288
51R:R:C79 R:R:F134 15.170711.17NoYes298
52R:R:C75 R:R:C79 10.1331.82NoNo049
53R:R:L129 R:R:S176 14.56334.5NoNo057
54R:R:L129 R:R:S172 38.09176.01NoNo057
55R:R:S130 R:R:W169 22.617311.12NoYes279
56R:R:F134 R:R:W169 17.663412.03YesYes289
57R:R:F257 R:R:I287 39.45336.28YesYes057
58R:R:L132 R:R:W254 35.520515.94NoYes077
59R:R:F195 R:R:L132 33.98096.09NoNo047
60R:R:F195 R:R:L129 31.1954.87NoNo045
61R:R:F134 R:R:I168 10.13311.3YesNo086
62R:R:F250 R:R:W254 40.96158.02YesYes187
63R:R:F250 R:R:M203 49.90578.71YesNo088
64R:R:M203 R:R:Y207 28.39345.99NoYes088
65R:R:D141 R:R:Y152 27.518910.34NoYes098
66R:R:M210 R:R:Y207 22.27694.79NoYes398
67R:R:I146 R:R:M210 20.38125.83NoNo089
68R:R:F147 R:R:I146 18.50658.79YesNo068
69R:R:V156 R:R:Y152 18.43847.57NoYes078
70R:R:I144 R:R:V156 15.39074.61NoNo067
71R:R:F257 R:R:F258 46.941810.72YesYes055
72R:R:F258 R:R:L192 22.22466.09YesNo055
73R:R:F179 R:R:L192 20.41793.65YesNo055
74R:R:F196 R:R:F258 15.076527.86YesYes075
75R:R:L247 R:R:M203 27.58174.24NoNo078
76R:R:L246 R:R:Y298 11.30085.86NoYes089
77R:R:L243 R:R:L247 23.08865.54NoNo087
78R:R:L211 R:R:L243 18.55364.15YesNo068
79R:R:I287 R:R:N290 12.07064.25YesYes179
80R:R:C273 R:R:F277 28.436.98NoYes043
81R:R:C267 R:R:C273 15.90397.28NoNo034
82R:R:D294 R:R:N290 11.07566.73NoYes099
83R:R:N91 R:R:T124 29.5148.77YesYes075
84L:L:?7 R:R:E94 12.568112.35YesNo104
85R:R:F257 R:R:L261 11.133213.4YesNo055
86L:L:?7 R:R:I180 25.41374.84YesYes105
87R:R:M128 R:R:T124 23.23524.52YesYes155
88R:R:F258 R:R:W254 43.92546.01YesYes057
89R:R:F196 R:R:F250 15.01366.43YesYes078
90R:R:I287 R:R:W254 29.57698.22YesYes177
91R:R:F250 R:R:L135 13.70976.09YesYes188
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:Y2 R:R:R109 8.23 0 No No 0 3 0 1
L:L:?4 R:R:I98 8.03 0 Yes No 0 3 0 1
L:L:?4 R:R:D117 12.73 0 Yes No 0 6 0 1
L:L:H6 R:R:D42 5.04 1 Yes Yes 0 3 0 1
L:L:H6 R:R:F45 18.1 1 Yes No 0 6 0 1
L:L:H6 R:R:E94 7.39 1 Yes No 0 4 0 1
L:L:H6 R:R:T95 6.85 1 Yes No 0 5 0 1
L:L:H6 R:R:I98 5.3 1 Yes No 0 3 0 1
L:L:?7 R:R:E94 12.35 1 Yes No 0 4 0 1
L:L:?7 R:R:D121 18.4 1 Yes Yes 0 5 0 1
L:L:?7 R:R:T124 11.24 1 Yes Yes 0 5 0 1
L:L:?7 R:R:M128 4.79 1 Yes Yes 0 5 0 1
L:L:?7 R:R:I180 4.84 1 Yes Yes 0 5 0 1
L:L:?7 R:R:F257 6.19 1 Yes Yes 0 5 0 1
L:L:R8 R:R:D117 5.96 1 Yes No 0 6 0 1
L:L:R8 R:R:D121 14.29 1 Yes Yes 0 5 0 1
L:L:R8 R:R:I180 5.01 1 Yes Yes 0 5 0 1
L:L:R8 R:R:Y183 23.66 1 Yes No 0 3 0 1
L:L:W9 R:R:Y183 5.79 1 Yes No 0 3 0 1
L:L:W9 R:R:L189 10.25 1 Yes Yes 0 4 0 1
L:L:W9 R:R:L261 6.83 1 Yes No 0 5 0 1
L:L:G10 R:R:F280 10.54 0 No Yes 0 4 0 1
L:L:P12 R:R:F277 8.67 0 No Yes 0 3 0 1
R:R:D42 R:R:T95 5.78 1 Yes No 3 5 1 1
R:R:D42 R:R:L99 6.79 1 Yes No 3 4 1 2
R:R:F45 R:R:N91 6.04 0 No Yes 6 7 1 2
R:R:F45 R:R:L284 6.09 0 No No 6 4 1 2
R:R:L46 R:R:T95 4.42 1 No No 5 5 2 1
R:R:S90 R:R:T124 6.4 0 No Yes 5 5 2 1
R:R:N91 R:R:T124 8.77 0 Yes Yes 7 5 2 1
R:R:D121 R:R:E94 6.5 1 Yes No 5 4 1 1
R:R:A110 R:R:R109 6.91 0 No No 3 3 2 1
R:R:D117 R:R:D121 9.31 1 No Yes 6 5 1 1
R:R:I180 R:R:N118 4.25 1 Yes No 5 4 1 2
R:R:I180 R:R:V122 4.61 1 Yes No 5 5 1 2
R:R:M128 R:R:T124 4.52 1 Yes Yes 5 5 1 1
R:R:C125 R:R:I180 6.55 0 No Yes 4 5 2 1
R:R:M128 R:R:W254 5.82 1 Yes Yes 5 7 1 2
R:R:I287 R:R:M128 4.37 1 Yes Yes 7 5 2 1
R:R:L189 R:R:L261 4.15 1 Yes No 4 5 1 1
R:R:I264 R:R:L189 4.28 0 No Yes 4 4 2 1
R:R:F258 R:R:W254 6.01 0 Yes Yes 5 7 2 2
R:R:I287 R:R:W254 8.22 1 Yes Yes 7 7 2 2
R:R:F257 R:R:F258 10.72 0 Yes Yes 5 5 1 2
R:R:F257 R:R:L261 13.4 0 Yes No 5 5 1 1
R:R:F257 R:R:F280 6.43 0 Yes Yes 5 4 1 1
R:R:F257 R:R:I287 6.28 0 Yes Yes 5 7 1 2
R:R:H260 R:R:I264 5.3 0 Yes No 4 4 2 2
R:R:F277 R:R:H260 18.1 0 Yes Yes 3 4 1 2
R:R:F280 R:R:H260 13.58 0 Yes Yes 4 4 1 2
R:R:C267 R:R:C273 7.28 0 No No 3 4 2 2
R:R:C273 R:R:F277 6.98 0 No Yes 4 3 2 1
R:R:F277 R:R:G274 6.02 0 Yes No 3 2 1 2
R:R:F280 R:R:L284 9.74 0 Yes No 4 4 1 2
R:R:A108 R:R:L113 3.15 0 No Yes 1 6 2 1
R:R:L116 R:R:V97 2.98 0 No No 3 4 2 1
R:R:L189 R:R:V265 2.98 1 Yes No 4 4 1 2
R:R:D121 R:R:I120 2.8 1 Yes No 5 5 1 2
L:L:?4 R:R:V97 2.79 0 Yes No 0 4 0 1
R:R:L101 R:R:L113 2.77 0 No Yes 3 6 2 1
R:R:C267 R:R:P268 1.88 0 No No 3 3 2 1
L:L:V13 R:R:P268 1.77 0 No No 0 3 0 1
R:R:D42 R:R:G43 1.68 1 Yes No 3 5 1 2
R:R:L113 R:R:L116 1.38 0 Yes No 6 3 1 2
L:L:Y2 R:R:L113 1.17 0 No Yes 0 6 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7F4H_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 4.14
Number of Linked Nodes 252
Number of Links 280
Number of Hubs 37
Number of Links mediated by Hubs 137
Number of Communities 5
Number of Nodes involved in Communities 38
Number of Links involved in Communities 52
Path Summary
Number Of Nodes in MetaPath 92
Number Of Links MetaPath 91
Number of Shortest Paths 57593
Length Of Smallest Path 3
Average Path Length 12.8081
Length of Longest Path 28
Minimum Path Strength 1.275
Average Path Strength 6.85369
Maximum Path Strength 19.29
Minimum Path Correlation 0.7
Average Path Correlation 0.930363
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 52.9036
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.9863
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNLE
PDB ResiduesL:L:?4
Environment DetailsOpen EMBL-EBI Page
CodeNLE
NameNorleucine
Synonyms
  • L-NORLEUCINE
  • Norleucine
Identifier
FormulaC6 H13 N O2
Molecular Weight131.173
SMILES
PubChem21236
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0

CodeDPN
PDB ResiduesL:L:?7
Environment DetailsOpen EMBL-EBI Page
CodeDPN
NameD-Phenylalanine
SynonymsD-Phenylalanine
Identifier
FormulaC9 H11 N O2
Molecular Weight165.189
SMILES
PubChem71567
Formal Charge0
Total Atoms23
Total Chiral Atoms1
Total Bonds23
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ01726
Sequence
>7F4H_nogp_Chain_R
LEVSISDGL FLSLGLVSL VENALVVAT IAKNRNLHS PMYCFICCL 
ALSDLLVSG SNVLETAVI LLLEAGALV ARAAVLQQL DNVIDVITC 
SSMLSSLCF LGAIAVDRY ISIFYALRY HSIVTLPRA RRAVAAIWV 
ASVVFSTLF IAYYDHVAV LLCLVVFFL AMLVLMAVL YVHMLARAC 
QHAQGIARL HKLKGAVTL TILLGIFFL CWGPFFLHL TLIVLCPEH 
PTCGCIFKN FNLFLALII CNAIIDPLI YAFHSQELR RTLKEV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7F4DAPeptideMelanocortinMC1Homo sapiensα-MSH-chim(NtGi1-Gs)/β1/γ232021-09-08doi.org/10.1038/s41422-021-00557-y
7F4D (No Gprot) APeptideMelanocortinMC1Homo sapiensα-MSH-32021-09-08doi.org/10.1038/s41422-021-00557-y
7F4FAPeptideMelanocortinMC1Homo sapiensAfamelanotide-chim(NtGi1-Gs)/β1/γ22.92021-09-08doi.org/10.1038/s41422-021-00557-y
7F4F (No Gprot) APeptideMelanocortinMC1Homo sapiensAfamelanotide-2.92021-09-08doi.org/10.1038/s41422-021-00557-y
7F4HAPeptideMelanocortinMC1Homo sapiensAfamelanotide-chim(NtGi1-Gs)/β1/γ22.72021-09-08doi.org/10.1038/s41422-021-00557-y
7F4H (No Gprot) APeptideMelanocortinMC1Homo sapiensAfamelanotide-2.72021-09-08doi.org/10.1038/s41422-021-00557-y
7F4IAPeptideMelanocortinMC1Homo sapiensSHU9119-chim(NtGi1-Gs)/β1/γ23.12021-09-08doi.org/10.1038/s41422-021-00557-y
7F4I (No Gprot) APeptideMelanocortinMC1Homo sapiensSHU9119-3.12021-09-08doi.org/10.1038/s41422-021-00557-y
9K3PAPeptideMelanocortinMC1Homo sapiens--chim(NtGi1-Gs)/β1/γ22.982025-08-06doi.org/10.1016/j.str.2025.03.004
9K3P (No Gprot) APeptideMelanocortinMC1Homo sapiens--2.982025-08-06doi.org/10.1016/j.str.2025.03.004




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Download 7F4H_nogp.zip



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