Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:S1 6.335410
2L:L:?2 6.893641110
3R:R:L53 4.64505
4R:R:Y61 7.452508
5R:R:F65 3.91507
6R:R:F79 5.105426
7R:R:L80 3.3725403
8R:R:I82 4.16405
9R:R:Q90 7.43427
10R:R:Y92 7467
11R:R:D100 6.69409
12R:R:R110 12.925407
13R:R:H114 7.518535
14R:R:N118 8.8075434
15R:R:W120 6.14167639
16R:R:F134 6.6125407
17R:R:Y135 8.4625415
18R:R:Y153 5.27507
19R:R:F186 4.7225417
20R:R:I190 3.8075415
21R:R:H199 5.75413
22R:R:Y207 5.734513
23R:R:R208 6.758515
24R:R:K210 7.096513
25R:R:E216 7.9625413
26R:R:F227 14.03448
27R:R:W228 4.085445
28R:R:F231 6.49833647
29R:R:I234 5.75408
30R:R:Y238 8.3408
31R:R:R252 9.6825404
32R:R:Y261 6.215406
33R:R:F279 10.25408
34R:R:Y282 8.86516
35R:R:F285 9.5975475
36R:R:R286 8.67857716
37R:R:Y289 11.316514
38R:R:V305 6.2575404
39R:R:H306 7.55404
40R:R:N309 8.16415
41R:R:D323 7.48409
42R:R:Y327 6.286529
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?2 R:R:N220 14.18386.76YesNo104
2R:R:N220 R:R:R286 13.342512.05NoYes146
3L:L:?2 L:L:S1 24.458810.56YesYes100
4L:L:S1 R:R:R286 13.18653.95YesYes106
5R:R:R286 R:R:Y289 63.290517.49YesYes164
6R:R:Y207 R:R:Y289 68.7739.93YesYes134
7R:R:H306 R:R:Y207 68.65494.36YesYes043
8R:R:E50 R:R:H306 42.38116.15NoYes044
9R:R:E50 R:R:L53 12.07116.63NoYes045
10L:L:S1 R:R:N309 11.65044.47YesYes105
11R:R:N309 R:R:Y289 35.778413.96YesYes154
12L:L:?2 R:R:R208 27.46487.69YesYes105
13R:R:K210 R:R:R208 14.91164.95YesYes135
14R:R:K210 R:R:Q293 16.967613.56YesNo134
15R:R:Q293 R:R:Y207 14.02314.51NoYes143
16R:R:E50 R:R:N118 28.41487.89NoYes044
17R:R:E310 R:R:H306 21.348913.54NoYes054
18R:R:E310 R:R:L53 12.55793.98NoYes055
19L:L:?2 R:R:Y135 27.639715.67YesYes105
20R:R:L313 R:R:Y135 24.71415.86NoYes155
21R:R:F134 R:R:L313 60.38386.09YesNo075
22R:R:F134 R:R:S317 54.03636.61YesNo077
23R:R:S317 R:R:Y61 53.01545.09NoYes078
24R:R:R110 R:R:Y61 29.91317.49YesYes078
25R:R:H114 R:R:R110 12.74227.9YesYes057
26R:R:L107 R:R:Y61 25.86734.69NoYes078
27R:R:F65 R:R:L107 24.4213.65YesNo077
28R:R:F65 R:R:I104 14.03253.77YesNo075
29R:R:G68 R:R:I104 12.51063.53NoNo085
30R:R:C321 R:R:G68 10.97933.92NoNo078
31R:R:F134 R:R:L103 14.817110.96YesNo077
32R:R:L103 R:R:S320 13.12037.51NoNo078
33R:R:D100 R:R:S320 12.77538.83YesNo098
34L:L:?2 R:R:M226 56.36174.97YesNo005
35R:R:I143 R:R:M226 55.70475.83NoNo055
36R:R:I143 R:R:I230 54.36712.94NoNo059
37R:R:I230 R:R:I234 70.94722.94NoYes098
38R:R:I234 R:R:S149 1007.74YesNo089
39R:R:S149 R:R:Y238 23.990911.45NoYes098
40R:R:R152 R:R:Y238 50.69488.23NoYes098
41R:R:I148 R:R:R152 42.22997.52NoNo099
42R:R:I148 R:R:Y92 40.75054.84NoYes097
43R:R:S171 R:R:Y92 34.951312.72NoYes077
44R:R:I91 R:R:S171 33.42477.74NoNo067
45R:R:I91 R:R:R86 28.78823.76NoNo067
46R:R:L80 R:R:R86 27.2194.86YesNo037
47R:R:L80 R:R:L94 21.07484.15YesNo036
48R:R:F79 R:R:L94 19.46783.65YesNo066
49R:R:F79 R:R:Q90 11.55594.68YesYes267
50L:L:?2 R:R:A182 13.36143.33YesNo007
51R:R:A182 R:R:I140 11.48033.25NoNo077
52R:R:D100 R:R:D323 10.31766.65YesYes099
53L:L:?2 R:R:L223 11.23458.76YesNo005
54R:R:F279 R:R:N319 13.67339.67YesNo089
55R:R:D323 R:R:N319 11.905713.46YesNo099
56R:R:I142 R:R:I230 22.79522.94NoNo089
57R:R:N118 R:R:Y113 21.490716.28YesNo345
58R:R:W120 R:R:Y113 25.39947.72YesNo395
59R:R:F109 R:R:W120 10.61063.01NoYes069
60R:R:F205 R:R:R110 12.496518.17NoYes047
61R:R:L122 R:R:W120 10.610610.25NoYes079
62L:L:?2 R:R:T132 18.94795.18YesNo105
63R:R:K128 R:R:R208 11.20627.43NoYes185
64R:R:H283 R:R:Y282 80.380911.98NoYes086
65R:R:F227 R:R:H283 82.796136.2YesNo088
66R:R:S149 R:R:S237 84.77644.89NoNo096
67R:R:S237 R:R:Y153 81.79883.82NoYes067
68R:R:N157 R:R:Y153 12.45868.14NoYes077
69R:R:I241 R:R:Y153 61.10223.63NoYes087
70R:R:I156 R:R:I241 55.34554.42NoNo088
71R:R:V305 R:R:Y289 32.59765.05YesYes044
72R:R:K302 R:R:Y207 13.53634.78NoYes043
73R:R:R286 R:R:V224 20.68723.92YesNo064
74R:R:F287 R:R:V224 20.127.87NoNo064
75R:R:F287 R:R:W228 18.93854.01NoYes065
76R:R:F227 R:R:F231 58.03015.36YesYes487
77R:R:F231 R:R:I235 42.75927.54YesNo074
78R:R:F275 R:R:I234 34.8718.79NoYes098
79R:R:I235 R:R:L272 41.44535.71NoNo047
80R:R:L272 R:R:Y238 39.38464.69NoYes078
81R:R:V271 R:R:Y238 11.64578.83NoYes078
82R:R:I156 R:R:L245 52.25922.85NoNo088
83R:R:A265 R:R:L245 12.43973.15NoNo058
84R:R:L245 R:R:T264 37.58862.95NoNo087
85R:R:K260 R:R:T264 34.88523NoNo057
86R:R:K260 R:R:Y261 31.74694.78NoYes056
87R:R:R252 R:R:Y261 15.904110.29YesYes046
88R:R:F285 R:R:V305 25.39466.55YesYes054
89R:R:F285 R:R:T308 14.571315.56YesNo755
90R:R:I304 R:R:T308 10.95571.52NoNo035
91R:R:F219 R:R:G185 10.47361.51NoNo054
92R:R:R286 R:R:Y282 26.793612.35YesYes166
93R:R:N309 R:R:Y282 25.12056.98YesYes156
94R:R:F227 R:R:I142 23.55617.54YesNo088
95R:R:F231 R:R:W228 17.98374.01YesYes475
96R:R:F231 R:R:F275 28.67956.43YesNo079
97R:R:L313 R:R:Y282 36.51577.03NoYes156
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:S1 R:R:Y135 6.36 1 Yes Yes 0 5 0 1
L:L:S1 R:R:R286 3.95 1 Yes Yes 0 6 0 1
L:L:S1 R:R:N309 4.47 1 Yes Yes 0 5 0 1
L:L:?2 R:R:T132 5.18 1 Yes No 0 5 0 1
L:L:?2 R:R:Y135 15.67 1 Yes Yes 0 5 0 1
L:L:?2 R:R:M189 10.94 1 Yes No 0 4 0 1
L:L:?2 R:R:R208 7.69 1 Yes Yes 0 5 0 1
L:L:?2 R:R:N220 6.76 1 Yes No 0 4 0 1
L:L:?2 R:R:L223 8.76 1 Yes No 0 5 0 1
L:L:?2 R:R:M226 4.97 1 Yes No 0 5 0 1
R:R:K128 R:R:R208 7.43 1 No Yes 8 5 2 1
R:R:F186 R:R:T132 5.19 1 Yes No 7 5 2 1
R:R:I190 R:R:T132 4.56 1 Yes No 5 5 2 1
R:R:Y135 R:R:Y282 5.96 1 Yes Yes 5 6 1 2
R:R:L313 R:R:Y135 5.86 1 No Yes 5 5 2 1
R:R:L223 R:R:Y139 7.03 0 No No 5 7 1 2
R:R:I143 R:R:M226 5.83 0 No No 5 5 2 1
R:R:F186 R:R:I190 6.28 1 Yes Yes 7 5 2 2
R:R:E216 R:R:M189 5.41 1 Yes No 3 4 2 1
R:R:F219 R:R:M189 8.71 0 No No 5 4 2 1
R:R:H206 R:R:R208 7.9 0 No Yes 5 5 2 1
R:R:K210 R:R:R208 4.95 1 Yes Yes 3 5 2 1
R:R:E216 R:R:R208 5.82 1 Yes Yes 3 5 2 1
R:R:E216 R:R:K210 12.15 1 Yes Yes 3 3 2 2
R:R:F219 R:R:L223 6.09 0 No No 5 5 2 1
R:R:N220 R:R:R286 12.05 1 No Yes 4 6 1 1
R:R:I290 R:R:N220 4.25 1 No No 5 4 2 1
R:R:R286 R:R:V224 3.92 1 Yes No 6 4 1 2
R:R:R286 R:R:Y282 12.35 1 Yes Yes 6 6 1 2
R:R:N309 R:R:Y282 6.98 1 Yes Yes 5 6 1 2
R:R:L313 R:R:Y282 7.03 1 No Yes 5 6 2 2
R:R:R286 R:R:Y289 17.49 1 Yes Yes 6 4 1 2
R:R:I290 R:R:R286 3.76 1 No Yes 5 6 2 1
R:R:N309 R:R:R286 7.23 1 Yes Yes 5 6 1 1
R:R:N309 R:R:Y289 13.96 1 Yes Yes 5 4 1 2
L:L:?2 R:R:A182 3.33 1 Yes No 0 7 0 1
R:R:A182 R:R:I140 3.25 0 No No 7 7 1 2
R:R:I218 R:R:I222 1.47 0 No No 5 5 2 1
L:L:?2 R:R:I222 1 1 Yes No 0 5 0 1
L:L:?2 R:R:L229 0.97 1 Yes No 0 5 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8WRB_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.76
Number of Linked Nodes 263
Number of Links 296
Number of Hubs 42
Number of Links mediated by Hubs 162
Number of Communities 7
Number of Nodes involved in Communities 47
Number of Links involved in Communities 64
Path Summary
Number Of Nodes in MetaPath 98
Number Of Links MetaPath 97
Number of Shortest Paths 58401
Length Of Smallest Path 3
Average Path Length 14.2752
Length of Longest Path 33
Minimum Path Strength 1.14667
Average Path Strength 7.45513
Maximum Path Strength 24.09
Minimum Path Correlation 0.7
Average Path Correlation 0.919189
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 41.7428
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.7865
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle
Gene OntologyCellular Component• midbody   • cellular anatomical structure   • membrane-bounded organelle   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • organelle   • membraneless organelle   • nuclear lumen   • cell periphery   • cell cortex   • cytoplasm   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • G protein-coupled purinergic nucleotide receptor activity   • purinergic nucleotide receptor activity   • nucleotide receptor activity
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeUBL
PDB ResiduesL:L:?2
Environment DetailsOpen EMBL-EBI Page
CodeUBL
Name[(2R)-2-oxidanyl-3-phosphonooxy-propyl] (Z)-octadec-9-enoate
Synonyms
Identifier
FormulaC21 H41 O7 P
Molecular Weight436.52
SMILES
PubChem5311263
Formal Charge0
Total Atoms70
Total Chiral Atoms1
Total Bonds69
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9UPC5
Sequence
>8WRB_nogp_Chain_R
EKLLSTVLT TSYSVIFIV GLVGNIIAL YVFLGIHRK RNSIQIYLL 
NVAIADLLL IFCLPFRIM YHINQNKWT LGVILCKVV GTLFYMNMY 
ISIILLGFI SLDRYIKIN TTKQSIYVC CIVWMLALG GFLTMIILT 
LKKGGHNST MCFHYRDKH NAKGEAIFN FILVVMFWL IFLLIILSY 
IKIGKNLLR ISKRRSKFP NSGKYATTA RNSFIVLII FTICFVPYH 
AFRFIYISS QLNVSSCYW KEIVHKTNE IMLVLSSFN SCLDPVMYF 
LMSSNIRKI MC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8XBGAOrphanOrphanGPR34Homo sapiensS3E-LysoPS--3.432024-05-1510.1038/s41467-024-45046-z
8XBEAOrphanOrphanGPR34Homo sapiensS3E-LysoPS-Gi1/β1/γ13.42024-05-1510.1038/s41467-024-45046-z
8XBE (No Gprot) AOrphanOrphanGPR34Homo sapiensS3E-LysoPS-3.42024-05-1510.1038/s41467-024-45046-z
8IZ4AOrphanOrphanGPR34Homo sapiensLysophosphatidylserine-Gi1/β1/γ22.942024-04-10To be published
8IZ4 (No Gprot) AOrphanOrphanGPR34Homo sapiensLysophosphatidylserine-2.942024-04-10To be published
8IYXAOrphanOrphanGPR34Homo sapiensYL-365--3.342024-03-2010.1073/pnas.2308435120
8XBIAOrphanOrphanGPR34Homo sapiensS3E-LysoPS--3.062023-12-27To be published
8XBHAOrphanOrphanGPR34Homo sapiensS3E-LysoPS-Gi1/β1/γ22.832023-12-27To be published
8XBH (No Gprot) AOrphanOrphanGPR34Homo sapiensS3E-LysoPS-2.832023-12-27To be published
8WRBAOrphanOrphanGPR34Homo sapiensLysophosphatidylserine-Gi1/β1/γ22.912023-11-0810.1371/journal.pbio.3002387
8WRB (No Gprot) AOrphanOrphanGPR34Homo sapiensLysophosphatidylserine-2.912023-11-0810.1371/journal.pbio.3002387
8K4NAOrphanOrphanGPR34Homo sapiensVF0-Gi1/β1/γ22.832023-10-25To be published
8K4N (No Gprot) AOrphanOrphanGPR34Homo sapiensVF0-2.832023-10-25To be published
8SAIAOrphanOrphanGPR34Homo sapiens1-Oleoyl-2-Hydroxy-Sn-Glycero-3-Phospho-L-Serine-Gi1/β1/γ23.272023-10-0410.1073/pnas.2308435120
8SAI (No Gprot) AOrphanOrphanGPR34Homo sapiens1-Oleoyl-2-Hydroxy-Sn-Glycero-3-Phospho-L-Serine-3.272023-10-0410.1073/pnas.2308435120




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8WRB_nogp.zip



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