Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.00667600
2R:R:Y642 5.802509
3R:R:L679 3.3275478
4R:R:H694 7.53167649
5R:R:Y695 5.958519
6R:R:F696 7.945409
7R:R:W703 9.8419
8R:R:H710 5.50833629
9R:R:L713 4.2925405
10R:R:Y726 10.736528
11R:R:F730 7.7575408
12R:R:W735 7.82519
13R:R:P738 4.18509
14R:R:Y753 7.37833649
15R:R:F769 6.674509
16R:R:F778 6.0075499
17R:R:F790 6.236589
18R:R:N793 3.2175409
19R:R:F797 6.466509
20R:R:W838 9.015639
21R:R:F852 5.0525409
22R:R:F856 5.424539
23R:R:T861 3.3525408
24R:R:Q863 5.0175439
25R:R:F865 6.8175457
26R:R:F868 7.14569
27R:R:F870 4.37409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:L620 11.46045.51YesNo009
2L:L:?1 R:R:F856 58.0658.48YesYes009
3R:R:F856 R:R:N860 49.04097.25YesNo399
4R:R:N860 R:R:T837 98.61385.85NoNo099
5R:R:F832 R:R:T837 98.87997.78NoNo069
6R:R:F832 R:R:F866 10021.43NoNo069
7R:R:F865 R:R:F866 99.42595.36YesNo579
8R:R:F634 R:R:F865 25.24510.72NoYes097
9L:L:?1 R:R:T624 12.81855.87YesNo009
10R:R:T624 R:R:T861 11.34844.71NoYes098
11R:R:F856 R:R:W838 17.39014.01YesYes399
12R:R:F701 R:R:W838 58.33810.02NoYes099
13R:R:F701 R:R:L697 17.70518.53NoNo099
14R:R:L667 R:R:L697 16.16494.15NoNo099
15R:R:L667 R:R:N668 14.61084.12NoNo099
16R:R:N668 R:R:S631 13.04264.47NoNo099
17R:R:G864 R:R:S631 11.46043.71NoNo099
18R:R:F634 R:R:F868 19.952418.22NoYes099
19R:R:C872 R:R:T641 10.45235.07NoNo099
20R:R:T641 R:R:W882 11.796413.34NoNo099
21R:R:F865 R:R:I869 93.41227.54YesNo076
22R:R:F870 R:R:I869 93.27923.77YesNo096
23R:R:F870 R:R:G829 92.39716.02YesNo099
24R:R:G829 R:R:Y871 92.22914.35NoNo098
25R:R:L657 R:R:Y871 21.99665.86NoNo098
26R:R:L657 R:R:Y642 20.72254.69NoYes099
27R:R:I648 R:R:Y642 12.52459.67NoYes089
28R:R:S654 R:R:Y642 21.92663.82NoYes099
29R:R:I658 R:R:Y642 10.04627.25NoYes099
30R:R:V878 R:R:W882 13.85474.9NoNo099
31R:R:K875 R:R:V878 14.56174.55NoNo099
32R:R:K875 R:R:Y642 17.38313.58NoYes099
33R:R:I648 R:R:Q881 10.04624.12NoNo089
34R:R:D651 R:R:S654 21.85668.83NoNo099
35R:R:L833 R:R:Y871 87.762512.89NoNo098
36R:R:E707 R:R:L833 87.29355.3NoNo099
37R:R:E707 R:R:H710 22.33973.69NoYes299
38R:R:H710 R:R:P653 23.45289.15YesNo099
39R:R:E707 R:R:I656 64.47776.83NoNo299
40R:R:F730 R:R:I656 73.87993.77YesNo089
41R:R:F730 R:R:L706 93.71328.53YesNo089
42R:R:L706 R:R:W703 92.45316.83NoYes099
43R:R:W703 R:R:W735 88.217613.12YesYes199
44R:R:W735 R:R:Y695 69.25236.75YesYes199
45L:L:?1 R:R:T765 34.878210.26YesNo005
46R:R:P766 R:R:T765 32.11995.25NoNo055
47R:R:F769 R:R:P766 30.71977.22YesNo095
48R:R:D674 R:R:F769 23.725814.33NoYes099
49R:R:C770 R:R:D674 20.74356.22NoNo099
50R:R:V742 R:R:Y695 61.02635.05NoYes099
51R:R:H694 R:R:V742 58.0584.15YesNo099
52R:R:H694 R:R:Y753 38.546613.07YesYes499
53R:R:V745 R:R:Y753 31.45486.31NoYes089
54R:R:V745 R:R:V777 29.60664.81NoNo087
55R:R:S774 R:R:V777 27.73036.46NoNo077
56R:R:N752 R:R:S774 23.93594.47NoNo087
57R:R:N752 R:R:S749 22.01765.96NoNo086
58R:R:P750 R:R:S749 14.20473.56NoNo066
59R:R:D751 R:R:P750 12.21651.61NoNo046
60R:R:D751 R:R:R683 10.21429.53NoNo045
61R:R:V699 R:R:W735 17.00512.26NoYes179
62R:R:P738 R:R:V699 16.05995.3YesNo097
63R:R:F701 R:R:F786 44.140310.72NoNo099
64R:R:F786 R:R:F790 39.89787.5NoYes899
65R:R:F790 R:R:V794 36.26447.87YesNo092
66R:R:I836 R:R:V794 30.74773.07NoNo092
67R:R:F797 R:R:I836 29.33356.28YesNo099
68R:R:H710 R:R:Y726 30.40467.62YesYes298
69R:R:L713 R:R:Y726 16.3753.52YesYes058
70R:R:L713 R:R:Y712 14.33773.52YesNo059
71R:R:M796 R:R:Y712 10.26323.59NoNo099
72R:R:I723 R:R:Y726 11.52347.25NoYes068
73R:R:I723 R:R:K729 10.01821.45NoNo069
74R:R:H694 R:R:V782 15.94795.54YesNo099
75R:R:F778 R:R:V782 14.10677.87YesNo099
76R:R:F797 R:R:L801 14.42178.53YesNo097
77R:R:I827 R:R:L801 12.83951.43NoNo077
78R:R:I827 R:R:L804 11.29941.43NoNo079
79R:R:N860 R:R:W838 49.285924.86NoYes399
80R:R:D651 R:R:P653 21.78668.05NoNo099
81R:R:H710 R:R:I656 10.17925.3YesNo299
82R:R:F730 R:R:Y726 18.454214.44YesYes088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:L620 5.51 0 Yes No 0 9 0 1
L:L:?1 R:R:T624 5.87 0 Yes No 0 9 0 1
L:L:?1 R:R:N763 12.29 0 Yes No 0 5 0 1
L:L:?1 R:R:T765 10.26 0 Yes No 0 5 0 1
L:L:?1 R:R:M853 5.63 0 Yes No 0 8 0 1
L:L:?1 R:R:F856 8.48 0 Yes Yes 0 9 0 1
R:R:L620 R:R:Y854 3.52 0 No No 9 9 1 2
R:R:T624 R:R:T861 4.71 0 No Yes 9 8 1 2
R:R:P766 R:R:T765 5.25 0 No No 5 5 2 1
R:R:F856 R:R:W838 4.01 3 Yes Yes 9 9 1 2
R:R:N860 R:R:W838 24.86 3 No Yes 9 9 2 2
R:R:A841 R:R:F856 4.16 0 No Yes 9 9 2 1
R:R:F856 R:R:N860 7.25 3 Yes No 9 9 1 2
R:R:F840 R:R:F856 3.22 0 No Yes 9 9 2 1
R:R:A844 R:R:M853 3.22 0 No No 9 8 2 1
R:R:T621 R:R:T765 1.57 0 No No 9 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7XKD_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.52
Number of Linked Nodes 246
Number of Links 262
Number of Hubs 27
Number of Links mediated by Hubs 118
Number of Communities 9
Number of Nodes involved in Communities 36
Number of Links involved in Communities 41
Path Summary
Number Of Nodes in MetaPath 83
Number Of Links MetaPath 82
Number of Shortest Paths 31829
Length Of Smallest Path 3
Average Path Length 16.8215
Length of Longest Path 45
Minimum Path Strength 1.24
Average Path Strength 7.15731
Maximum Path Strength 17.645
Minimum Path Correlation 0.7
Average Path Correlation 0.937589
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 53.1151
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 32.9824
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • developmental process   • spermatid development   • spermatid differentiation   • sexual reproduction   • cellular developmental process   • spermatogenesis   • reproductive process   • multicellular organismal reproductive process   • cell development   • cellular process involved in reproduction in multicellular organism   • developmental process involved in reproduction   • gamete generation   • male gamete generation   • cell differentiation   • anatomical structure development   • germ cell development   • cell surface receptor signaling pathway   • cellular anatomical structure   • intracellular anatomical structure   • cytoplasm   • cytosol   • cell periphery   • apical part of cell   • membrane   • plasma membrane   • plasma membrane region   • apical plasma membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • molecular function regulator activity   • enzyme regulator activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase regulator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • sensory perception of smell   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to glucagon   • cellular response to glucagon stimulus   • skeletal system development   • bone development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • localization   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • intracellular protein localization   • regulation of peptide hormone secretion   • regulation of signaling   • regulation of transport   • secretion   • regulation of hormone levels   • regulation of peptide transport   • regulation of establishment of protein localization   • establishment of protein localization to extracellular region   • export from cell   • regulation of protein transport   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • peptide transport   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • cellular localization   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • endomembrane system   • trans-Golgi network
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeAND
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeAND
NamePrasterone
SynonymsDehydroepiandrosterone
Identifier
FormulaC19 H28 O2
Molecular Weight288.424
SMILES
PubChem5881
Formal Charge0
Total Atoms49
Total Chiral Atoms6
Total Bonds52
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ8CJ12
Sequence
>7XKD_nogp_Chain_R
QMMALTFIT YIGCGLSSI FLSVTLVTY IAFEKIRRD YPSKILIQL 
CAALLLLNL IFLLDSWIA LYNTRGFCI AVAVFLHYF LLVSFTWMG 
LEAFHMYLA LVKVFNTYI RKYILKFCI VGWGIPAVV VSIVLTISP 
DNYGIGNGT PDDFCWINS NVVFYITVV GYFCVIFLL NVSMFIVVL 
VQLCRIKKK KQLGAQRKT SIQDLRSIA GLTFLLGIT WGFAFFAWG 
VNVTFMYLF AIFNTLQGF FIFIFYCAA KENVRKQWR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7WUIB2AdhesionAdhesionADGRG2Mus musculusIP15-chim(NtGi1-Gs)/β1/γ23.12022-04-27doi.org/10.1038/s41586-022-04590-8
7WUI (No Gprot) B2AdhesionAdhesionADGRG2Mus musculusIP15-3.12022-04-27doi.org/10.1038/s41586-022-04590-8
7WUQB2AdhesionAdhesionADGRG2Mus musculus--Gs/β1/γ22.92022-04-27doi.org/10.1038/s41586-022-04590-8
7WUQ (No Gprot) B2AdhesionAdhesionADGRG2Mus musculus--2.92022-04-27doi.org/10.1038/s41586-022-04590-8
7XKDB2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-Gs/β1/γ22.42022-08-10doi.org/10.1038/s41589-022-01084-6
7XKD (No Gprot) B2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-2.42022-08-10doi.org/10.1038/s41589-022-01084-6
7XKEB2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-chim(NtGi1-Gs)/β1/γ22.92022-08-10doi.org/10.1038/s41589-022-01084-6
7XKE (No Gprot) B2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-2.92022-08-10doi.org/10.1038/s41589-022-01084-6
7XKFB2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-Gs/β1/γ22.42022-08-10doi.org/10.1038/s41589-022-01084-6
7XKF (No Gprot) B2AdhesionAdhesionADGRG2Mus musculusβ-Hydroxyandrosterone-2.42022-08-10doi.org/10.1038/s41589-022-01084-6
7YP7B2AdhesionAdhesionADGRG2Mus musculus--Gs/β1/γ23.12022-08-24doi.org/10.1038/s41589-022-01084-6
7YP7 (No Gprot) B2AdhesionAdhesionADGRG2Mus musculus--3.12022-08-24doi.org/10.1038/s41589-022-01084-6
8YKDB2AdhesionAdhesionADGRG2Mus musculusDehydroepiandrosterone-chim(NtGi1-Gs)/β1/γ22.92025-08-13doi.org/10.1038/s41589-025-01896-2
8YKD (No Gprot) B2AdhesionAdhesionADGRG2Mus musculusDehydroepiandrosterone-2.92025-08-13doi.org/10.1038/s41589-025-01896-2




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7XKD_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.