Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:I6 4.78420
2L:L:Y13 6.3525400
3L:L:R37 9.48440
4L:L:L61 7.3425400
5L:L:H67 7.2550
6L:L:L72 4.53400
7L:L:R74 7.555610
8R:R:K28 9.78543
9R:R:T29 6.81445
10R:R:V35 3.04403
11R:R:F44 5.482517
12R:R:F48 5.1275406
13R:R:V58 2.4825408
14R:R:W60 5.1425404
15R:R:T62 3.9275406
16R:R:W74 7.922507
17R:R:L78 8.0125439
18R:R:D82 7.8409
19R:R:L89 7.7525417
20R:R:W102 8.2475408
21R:R:L112 6.2225405
22R:R:L118 4.755405
23R:R:M120 4.4175417
24R:R:R134 7.255439
25R:R:L137 6.0425468
26R:R:W161 4.5775409
27R:R:R175 5.335605
28R:R:F182 7.584523
29R:R:P183 5.1825424
30R:R:Y192 8.58405
31R:R:F211 5.95618
32R:R:Y222 9.19508
33R:R:T229 4.7975408
34R:R:K239 4.215407
35R:R:F251 5.8725419
36R:R:F254 9.062588
37R:R:W255 7.42571719
38R:R:Y258 6.46667617
39R:R:T261 4.1425414
40R:R:Y290 7.628517
41R:R:N296 7.6375439
42R:R:Y300 9.8525439
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:I6 L:L:L2 52.59824.28YesNo000
2L:L:L2 L:L:L61 53.410416.61NoYes000
3R:R:F104 R:R:W102 10.654116.04NoYes078
4L:L:L72 R:R:W102 19.27013.42YesYes008
5L:L:L72 R:R:S95 69.96974.5YesNo004
6L:L:Q71 R:R:S95 69.27144.33NoNo004
7L:L:Q71 R:R:H100 63.49814.95NoNo004
8L:L:D69 R:R:H100 62.753216.39NoNo004
9L:L:D69 R:R:L187 62.00314.07NoNo004
10R:R:L187 R:R:R178 61.247810.93NoNo042
11L:L:H67 R:R:R178 60.487314.67YesNo002
12L:L:H67 L:L:I65 56.60742.65YesNo000
13L:L:I65 L:L:L61 55.81592.85NoYes000
14L:L:I6 R:R:F182 41.892310.05YesYes203
15L:L:A10 L:L:K19 35.30433.21NoNo000
16L:L:K19 L:L:Y23 36.222.39NoNo000
17L:L:Y23 R:R:F182 37.130412.38NoYes003
18L:L:A10 L:L:C22 34.38353.61NoNo000
19L:L:C22 L:L:Y13 32.52631.34NoYes000
20L:L:A50 L:L:Y13 26.83076.67NoYes000
21L:L:A50 L:L:C21 25.86331.81NoNo000
22L:L:C21 L:L:C47 24.89077.28NoNo000
23L:L:F51 L:L:I41 14.88068.79NoNo000
24L:L:I41 L:L:L43 19.95037.14NoNo000
25L:L:C47 L:L:L43 23.91311.11NoNo000
26R:R:V190 R:R:Y192 23.67517.66NoYes055
27R:R:R175 R:R:V190 24.64246.54YesNo055
28R:R:P113 R:R:R175 27.31434.32NoYes065
29L:L:L72 R:R:P113 31.77883.28YesNo006
30L:L:L72 R:R:L92 1006.92YesNo006
31R:R:F44 R:R:L92 28.88443.65YesNo176
32R:R:F44 R:R:V286 22.69473.93YesNo175
33L:L:R74 R:R:V286 11.28535.23YesNo105
34R:R:V286 R:R:Y258 11.44316.31NoYes157
35R:R:L92 R:R:Y290 71.52693.52NoYes167
36R:R:M120 R:R:Y290 69.91545.99YesYes177
37L:L:R74 R:R:D282 16.737817.87YesNo104
38R:R:F44 R:R:S287 24.76917.93YesNo074
39R:R:A40 R:R:S287 21.91363.42NoNo064
40R:R:A40 R:R:L284 11.73024.73NoNo064
41R:R:F44 R:R:L89 17.76473.65YesYes177
42R:R:L89 R:R:Y290 14.774614.07YesYes177
43R:R:C86 R:R:L89 28.55854.76NoYes057
44R:R:C86 R:R:G51 27.89893.92NoNo058
45R:R:G51 R:R:N55 27.24973.39NoNo089
46R:R:D82 R:R:N55 14.25216.73YesNo099
47R:R:N55 R:R:P297 29.670716.29NoNo099
48R:R:P297 R:R:V58 26.12451.77NoYes098
49R:R:T62 R:R:V58 22.53183.17YesYes068
50R:R:L76 R:R:T62 12.72344.42NoYes066
51R:R:L76 R:R:V59 10.21962.98NoNo067
52R:R:M120 R:R:W255 66.03043.49YesYes179
53R:R:N292 R:R:W255 65.006113.56NoYes099
54R:R:L127 R:R:N292 64.69054.12NoNo089
55R:R:L127 R:R:L78 39.11184.15NoYes389
56R:R:I130 R:R:L78 30.44418.56NoYes089
57R:R:I130 R:R:W74 18.89763.52NoYes087
58R:R:D133 R:R:W74 14.932422.33NoYes087
59R:R:D133 R:R:L137 14.046.79NoYes088
60R:R:L126 R:R:L78 15.739415.22NoYes079
61R:R:C157 R:R:L126 13.95463.17NoNo067
62R:R:C157 R:R:N77 13.059711.02NoNo069
63R:R:L127 R:R:N296 25.312312.36NoYes389
64R:R:N296 R:R:Y300 27.78774.65YesYes399
65R:R:I130 R:R:R134 17.26036.26NoYes089
66R:R:R134 R:R:Y300 18.478610.29YesYes399
67R:R:N77 R:R:W161 10.52484.52NoYes099
68R:R:Y174 R:R:Y192 16.75852.98NoYes045
69R:R:L173 R:R:Y174 11.66294.69NoNo044
70R:R:I169 R:R:L173 10.62832.85NoNo034
71R:R:I124 R:R:W255 24.438112.92NoYes089
72R:R:I124 R:R:P214 23.66983.39NoNo089
73R:R:P214 R:R:W213 22.31976.76NoNo095
74R:R:T217 R:R:W213 19.96597.28NoNo055
75R:R:S131 R:R:T217 19.24163.2NoNo095
76R:R:S131 R:R:Y222 16.241212.72NoYes098
77R:R:R134 R:R:Y222 32.63249.26YesYes098
78R:R:F211 R:R:W255 16.52574.01YesYes189
79R:R:F211 R:R:L256 10.11613.65YesNo085
80R:R:V244 R:R:Y222 28.747312.62NoYes078
81R:R:L226 R:R:V244 26.56687.45NoNo057
82R:R:L226 R:R:L241 24.38125.54NoNo056
83R:R:L241 R:R:W230 17.79319.11NoNo064
84R:R:T229 R:R:W230 13.37523.64YesNo084
85R:R:I299 R:R:Y300 11.75612.09NoYes079
86R:R:D282 R:R:M265 15.91539.7NoNo044
87R:R:F275 R:R:M265 13.02094.98NoNo034
88R:R:F275 R:R:L268 11.065413.4NoNo032
89L:L:R74 R:R:Y258 11.199912.35YesYes107
90R:R:W255 R:R:Y258 19.30115.79YesYes197
91R:R:D82 R:R:N296 13.0269.42YesYes099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:Q3 R:R:Y181 10.15 0 No No 0 1 0 1
L:L:I6 R:R:F182 10.05 2 Yes Yes 0 3 0 1
L:L:K20 R:R:L22 4.23 0 No No 0 3 0 1
L:L:K20 R:R:T24 4.5 0 No No 0 4 0 1
L:L:Y23 R:R:F182 12.38 0 No Yes 0 3 0 1
L:L:D24 R:R:D27 14.64 0 No No 0 9 0 1
L:L:G25 R:R:D27 3.35 0 No No 0 9 0 1
L:L:A26 R:R:F182 4.16 2 No Yes 0 3 0 1
L:L:N29 R:R:K28 9.79 4 No Yes 0 3 0 1
L:L:N29 R:R:T29 4.39 4 No Yes 0 5 0 1
L:L:N30 R:R:L276 9.61 0 No No 0 3 0 1
L:L:D31 R:R:K28 16.59 4 No Yes 0 3 0 1
L:L:D31 R:R:T29 8.67 4 No Yes 0 5 0 1
L:L:C34 R:R:K28 4.85 0 No Yes 0 3 0 1
L:L:R37 R:R:K28 8.66 4 Yes Yes 0 3 0 1
L:L:R37 R:R:T29 5.17 4 Yes Yes 0 5 0 1
L:L:H67 R:R:V176 4.15 5 Yes No 0 4 0 1
L:L:H67 R:R:R178 14.67 5 Yes No 0 2 0 1
L:L:H67 R:R:G189 3.18 5 Yes No 0 4 0 1
L:L:H67 R:R:D191 11.35 5 Yes No 0 4 0 1
L:L:K68 R:R:Y192 3.58 0 No Yes 0 5 0 1
L:L:D69 R:R:H100 16.39 0 No No 0 4 0 1
L:L:D69 R:R:L187 4.07 0 No No 0 4 0 1
L:L:M70 R:R:R175 3.72 0 No Yes 0 5 0 1
L:L:Q71 R:R:S95 4.33 0 No No 0 4 0 1
L:L:Q71 R:R:I96 8.23 0 No No 0 5 0 1
L:L:Q71 R:R:H100 4.95 0 No No 0 4 0 1
L:L:L72 R:R:L92 6.92 0 Yes No 0 6 0 1
L:L:L72 R:R:S95 4.5 0 Yes No 0 4 0 1
L:L:L72 R:R:W102 3.42 0 Yes Yes 0 8 0 1
L:L:L72 R:R:P113 3.28 0 Yes No 0 6 0 1
L:L:R74 R:R:Y258 12.35 1 Yes Yes 0 7 0 1
L:L:R74 R:R:T261 3.88 1 Yes Yes 0 4 0 1
L:L:R74 R:R:D282 17.87 1 Yes No 0 4 0 1
L:L:R74 R:R:V286 5.23 1 Yes No 0 5 0 1
R:R:K28 R:R:T29 9.01 4 Yes Yes 3 5 1 1
R:R:F44 R:R:L92 3.65 1 Yes No 7 6 2 1
R:R:F44 R:R:V286 3.93 1 Yes No 7 5 2 1
R:R:F44 R:R:Y290 8.25 1 Yes Yes 7 7 2 2
R:R:L92 R:R:Y290 3.52 1 No Yes 6 7 1 2
R:R:F104 R:R:W102 16.04 0 No Yes 7 8 2 1
R:R:L112 R:R:W102 5.69 0 Yes Yes 5 8 2 1
R:R:C188 R:R:W102 7.84 0 No Yes 9 8 2 1
R:R:L112 R:R:P113 4.93 0 Yes No 5 6 2 1
R:R:P113 R:R:R175 4.32 0 No Yes 6 5 1 1
R:R:M120 R:R:W255 3.49 1 Yes Yes 7 9 2 2
R:R:M120 R:R:Y258 3.59 1 Yes Yes 7 7 2 1
R:R:M120 R:R:Y290 5.99 1 Yes Yes 7 7 2 2
R:R:R175 R:R:S171 9.22 0 Yes No 5 5 1 2
R:R:C188 R:R:R175 5.57 0 No Yes 9 5 2 1
R:R:R175 R:R:V190 6.54 0 Yes No 5 5 1 2
R:R:D191 R:R:V176 13.15 5 No No 4 4 1 1
R:R:L187 R:R:R178 10.93 0 No No 4 2 1 1
R:R:E179 R:R:Y181 6.73 0 No No 2 1 2 1
R:R:E180 R:R:F182 7 2 No Yes 1 3 2 1
R:R:E180 R:R:P183 9.43 2 No Yes 1 4 2 2
R:R:F182 R:R:P183 4.33 2 Yes Yes 3 4 1 2
R:R:V190 R:R:Y192 17.66 0 No Yes 5 5 2 1
R:R:D191 R:R:H194 8.82 5 No No 4 1 1 2
R:R:E199 R:R:Y192 10.1 0 No Yes 4 5 2 1
R:R:W255 R:R:Y258 5.79 1 Yes Yes 9 7 2 1
R:R:A289 R:R:W255 5.19 1 No Yes 8 9 2 2
R:R:Q259 R:R:Y258 6.76 0 No Yes 8 7 2 1
R:R:V286 R:R:Y258 6.31 1 No Yes 5 7 1 1
R:R:A289 R:R:Y258 4 1 No Yes 8 7 2 1
R:R:D282 R:R:T261 4.34 1 No Yes 4 4 1 1
R:R:C285 R:R:T261 6.76 0 No Yes 6 4 2 1
R:R:D282 R:R:M265 9.7 1 No No 4 4 1 2
R:R:P273 R:R:S272 3.56 0 No No 2 4 1 2
R:R:K280 R:R:L276 8.46 0 No No 2 3 2 1
L:L:R74 R:R:G262 3 1 Yes No 0 5 0 1
R:R:Y174 R:R:Y192 2.98 0 No Yes 4 5 2 1
L:L:S66 R:R:D195 2.94 0 No No 0 3 0 1
R:R:R175 R:R:S110 2.64 0 Yes No 5 6 1 2
R:R:P25 R:R:T24 1.75 0 No No 8 4 2 1
R:R:T261 R:R:V260 1.59 1 Yes No 4 6 1 2
L:L:E32 R:R:P273 1.57 0 No No 0 2 0 1
R:R:I96 R:R:V97 1.54 0 No No 5 3 1 2
R:R:D27 R:R:V26 1.46 0 No No 9 5 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8IA2_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.15
Number of Linked Nodes 347
Number of Links 373
Number of Hubs 42
Number of Links mediated by Hubs 160
Number of Communities 8
Number of Nodes involved in Communities 44
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 92
Number Of Links MetaPath 91
Number of Shortest Paths 78525
Length Of Smallest Path 3
Average Path Length 17.7772
Length of Longest Path 45
Minimum Path Strength 1.35
Average Path Strength 6.6626
Maximum Path Strength 23.255
Minimum Path Correlation 0.7
Average Path Correlation 0.953207
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.77778
Average % Of Corr. Nodes 60.0849
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 35.2593
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Anaphylotoxins (complement system)   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Anaphylotoxins (complement system)   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP21730
Sequence
>8IA2_nogp_Chain_R
LNTPVDKTS NTLRVPDIL ALVIFAVVF LVGVLGNAL VVWVTAFEA 
KRTINAIWF LNLAVADFL SCLALPILF TSIVQHHHW PFGGAACSI 
LPSLILLNM YASILLLAT ISADRFLLV FKPIWCQNF RGAGLAWIA 
CAVAWGLAL LLTIPSFLY RVVREEYFP PKVLCGVDY SHDKRRERA 
VAIVRLVLG FLWPLLTLT ICYTFILLR TWSRRATRS TKTLKVVVA 
VVASFFIFW LPYQVTGIM MSFLEPSSP TFLLLKKLD SLCVSFAYI 
NCCINPIIY VVAGQGFQG RLRKSL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
5O9HAPeptideComplement PeptideC5a1Homo sapiens-NDT9513727-2.72018-01-10doi.org/10.1038/nature25025
6C1QAPeptideComplement PeptideC5a1Homo sapiensPMX53NDT9513727-2.92018-05-30doi.org/10.1038/s41594-018-0067-z
6C1RAPeptideComplement PeptideC5a1Homo sapiensPMX53Avacopan; Na-2.22018-05-30doi.org/10.1038/s41594-018-0067-z
8HPTAPeptideComplement PeptideC5a1Mus musculusC5a anaphylatoxin C-terminal peptide-Go/β1/γ23.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HPT (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a anaphylatoxin C-terminal peptide-3.392023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQCAPeptideComplement PeptideC5a1Mus musculusC5a anaphylatoxin-Go/β1/γ23.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8HQC (No Gprot) APeptideComplement PeptideC5a1Mus musculusC5a anaphylatoxin-3.892023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2APeptideComplement PeptideC5a1Homo sapiensC5a anaphylatoxin-Go/β1/γ23.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8IA2 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a anaphylatoxin-3.212023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZAPeptideComplement PeptideC5a1Homo sapiensC5a-desArg-Go/β1/γ23.312023-10-18doi.org/10.1016/j.cell.2023.09.020
8JZZ (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a-desArg-3.312023-10-18doi.org/10.1016/j.cell.2023.09.020
7Y64APeptideComplement PeptideC5a1Homo sapiensC5a anaphylatoxin-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y64 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a anaphylatoxin-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65APeptideComplement PeptideC5a1Homo sapiensC5a peptide-Gi1/β1/γ23.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y65 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5a peptide-3.22023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66APeptideComplement PeptideC5a1Homo sapiensBM213-Gi1/β1/γ22.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y66 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensBM213-2.92023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67APeptideComplement PeptideC5a1Homo sapiensC089 peptide-Gi1/β1/γ22.82023-03-01doi.org/10.1038/s41422-023-00779-2
7Y67 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC089 peptide-2.82023-03-01doi.org/10.1038/s41422-023-00779-2
8HK5APeptideComplement PeptideC5a1Homo sapiensComplement C5-Gi1/β1/γ232023-05-10doi.org/10.1038/s41589-023-01339-w
8HK5 (No Gprot) APeptideComplement PeptideC5a1Homo sapiensComplement C5-32023-05-10doi.org/10.1038/s41589-023-01339-w
8JZPAPeptideComplement PeptideC5a1Homo sapiensC5A anaphylatoxin-Go/β1/γ23.542025-01-15To be published
8JZP (No Gprot) APeptideComplement PeptideC5a1Homo sapiensC5A anaphylatoxin-3.542025-01-15To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8IA2_nogp.zip



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