Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.11143710
2R:R:Y36 4.2475445
3R:R:L39 3.66407
4R:R:F60 4.015665
5R:R:P66 3.815426
6R:R:D78 6.71459
7R:R:V85 5.046517
8R:R:M86 3.46507
9R:R:W98 5.3075418
10R:R:F100 4.7975406
11R:R:Y104 4.4325416
12R:R:H108 8.4525415
13R:R:D136 5.08476
14R:R:Y140 4.29527
15R:R:K143 3.245474
16R:R:F144 6.748526
17R:R:I167 3.608515
18R:R:F168 6.228515
19R:R:V199 4.77485
20R:R:F206 5.7975408
21R:R:M213 5.0475438
22R:R:Y217 4.875639
23R:R:M264 3.16438
24R:R:F267 4.578509
25R:R:W271 4.932508
26R:R:W298 4.955405
27R:R:Y301 9.5475418
28R:R:N307 6.2175459
29R:R:F318 5.16409
30R:R:I325 2.2525406
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y301 41.720711.34YesYes108
2R:R:W298 R:R:Y301 46.6636.75YesYes058
3R:R:L39 R:R:W298 23.79284.56YesYes075
4R:R:L35 R:R:L39 17.88394.15NoYes057
5R:R:L35 R:R:Y36 15.89973.52NoYes055
6L:L:?1 R:R:F117 58.56125.24YesNo005
7R:R:F117 R:R:W271 60.04394.01NoYes058
8R:R:S270 R:R:W271 36.25854.94NoYes088
9R:R:N303 R:R:S270 34.3847.45NoNo098
10R:R:N303 R:R:N307 32.96365.45NoYes099
11R:R:L74 R:R:N307 38.17326.87NoYes099
12R:R:H122 R:R:L74 37.40445.14NoNo089
13R:R:H122 R:R:S156 35.44948.37NoNo087
14R:R:F121 R:R:S156 34.90023.96NoNo057
15R:R:F121 R:R:S160 24.3312.64NoNo058
16R:R:A118 R:R:S160 16.24023.42NoNo078
17R:R:A118 R:R:W157 15.43116.48NoNo079
18R:R:F115 R:R:W157 13.89354.01NoNo079
19R:R:F115 R:R:L80 13.183210.96NoNo077
20R:R:F79 R:R:L80 12.53162.44NoNo077
21L:L:?1 R:R:V300 57.96083.2YesNo007
22R:R:V300 R:R:W271 58.45513.68NoYes078
23R:R:M86 R:R:W298 16.1342.33YesYes075
24L:L:?1 R:R:D112 22.804311.67YesNo106
25R:R:D112 R:R:V85 28.25557.3NoYes167
26R:R:V81 R:R:V85 10.7674.81NoYes077
27R:R:D78 R:R:S304 10.19598.83YesNo099
28R:R:F267 R:R:W271 1004.01YesYes098
29R:R:F267 R:R:M213 56.5666.22YesYes098
30R:R:M213 R:R:Y217 52.07763.59YesYes389
31R:R:R130 R:R:Y217 50.54735.14NoYes099
32R:R:R130 R:R:Y315 49.95793.09NoNo098
33R:R:W317 R:R:Y315 49.430713.5NoNo068
34R:R:F318 R:R:W317 47.64058.02YesNo096
35R:R:F318 R:R:N68 89.21114.83YesNo099
36R:R:L63 R:R:N68 58.29765.49NoNo089
37R:R:F60 R:R:L63 56.63193.65YesNo058
38R:R:F60 R:R:H59 27.453810.18YesNo656
39R:R:H59 R:R:V330 26.22375.54NoNo066
40R:R:I325 R:R:V330 24.72273.07YesNo066
41R:R:I325 R:R:I55 10.23611.47YesNo064
42R:R:F267 R:R:L123 52.07762.44YesNo098
43R:R:L123 R:R:Y311 51.36377.03NoNo089
44R:R:I126 R:R:Y311 48.69124.84NoNo099
45R:R:I126 R:R:V71 48.04321.54NoNo098
46R:R:I57 R:R:V71 47.41351.54NoNo078
47R:R:F318 R:R:I57 46.35555.02YesNo097
48R:R:N68 R:R:T65 37.61674.39NoNo098
49R:R:P66 R:R:T65 35.87773.5YesNo068
50R:R:F144 R:R:P66 28.8342.89YesYes266
51R:R:F144 R:R:V148 10.19222.62YesNo066
52R:R:H108 R:R:V85 15.50438.3YesYes157
53R:R:F206 R:R:W271 26.6418.02YesYes088
54R:R:F206 R:R:L272 27.56362.44YesNo086
55R:R:L272 R:R:P273 25.76971.64NoNo069
56R:R:L296 R:R:P273 23.96851.64NoNo059
57R:R:D277 R:R:L296 22.164.07NoNo055
58R:R:D277 R:R:T288 20.34418.67NoNo056
59R:R:D281 R:R:T288 13.00754.34NoNo036
60R:R:D281 R:R:F286 11.15522.69NoNo032
61L:L:?1 R:R:T113 51.80677.92YesNo104
62R:R:F168 R:R:T113 32.220411.67YesNo154
63R:R:S114 R:R:S160 10.52541.63NoNo058
64R:R:T113 R:R:Y163 17.89867.49NoNo145
65R:R:F121 R:R:P209 15.69832.89NoNo059
66R:R:C124 R:R:P209 12.95263.77NoNo079
67R:R:C124 R:R:V212 12.17283.42NoNo076
68R:R:L216 R:R:V212 10.65712.98NoNo066
69R:R:F144 R:R:Y140 15.02475.16YesYes267
70R:R:I132 R:R:Y140 10.30572.42NoYes057
71R:R:I167 R:R:Y163 16.14133.63YesNo155
72R:R:F168 R:R:I167 16.40497.54YesYes155
73R:R:F168 R:R:L194 12.83543.65YesNo054
74R:R:I167 R:R:N173 10.91341.42YesNo054
75R:R:I167 R:R:W198 14.53782.35YesNo056
76R:R:F206 R:R:T210 11.22835.19YesNo086
77R:R:F267 R:R:T210 12.13627.78YesNo096
78R:R:F60 R:R:S335 16.42691.32YesNo057
79R:R:L324 R:R:S335 14.39871.5NoNo047
80R:R:D78 R:R:N307 11.57978.08YesYes599
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D112 11.67 1 Yes No 0 6 0 1
L:L:?1 R:R:T113 7.92 1 Yes No 0 4 0 1
L:L:?1 R:R:F117 5.24 1 Yes No 0 5 0 1
L:L:?1 R:R:Y274 12.6 1 Yes No 0 6 0 1
L:L:?1 R:R:V297 4.81 1 Yes No 0 6 0 1
L:L:?1 R:R:V300 3.2 1 Yes No 0 7 0 1
L:L:?1 R:R:Y301 11.34 1 Yes Yes 0 8 0 1
R:R:D112 R:R:V85 7.3 1 No Yes 6 7 1 2
R:R:D112 R:R:Y301 13.79 1 No Yes 6 8 1 1
R:R:T113 R:R:Y163 7.49 1 No No 4 5 1 2
R:R:F168 R:R:T113 11.67 1 Yes No 5 4 2 1
R:R:F117 R:R:L205 4.87 0 No No 5 4 1 2
R:R:F117 R:R:W271 4.01 0 No Yes 5 8 1 2
R:R:F168 R:R:Y163 3.09 1 Yes No 5 5 2 2
R:R:V300 R:R:W271 3.68 0 No Yes 7 8 1 2
R:R:Y274 R:R:Y293 4.96 0 No No 6 4 1 2
R:R:V297 R:R:Y293 5.05 1 No No 6 4 1 2
R:R:V297 R:R:Y301 6.31 1 No Yes 6 8 1 1
R:R:W298 R:R:Y301 6.75 0 Yes Yes 5 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8ITF_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.77
Number of Linked Nodes 266
Number of Links 279
Number of Hubs 30
Number of Links mediated by Hubs 115
Number of Communities 8
Number of Nodes involved in Communities 37
Number of Links involved in Communities 44
Path Summary
Number Of Nodes in MetaPath 81
Number Of Links MetaPath 80
Number of Shortest Paths 55156
Length Of Smallest Path 3
Average Path Length 15.8613
Length of Longest Path 32
Minimum Path Strength 1.41
Average Path Strength 5.16471
Maximum Path Strength 13.935
Minimum Path Correlation 0.7
Average Path Correlation 0.933894
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 44.2907
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 36.8601
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code8IA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code8IA
Name~{N},~{N}-dimethylcyclohexanamine
Synonyms
Identifier
FormulaC8 H17 N
Molecular Weight127.227
SMILES
PubChem7415
Formal Charge0
Total Atoms26
Total Chiral Atoms0
Total Bonds26
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ5QD04
Sequence
>8ITF_nogp_Chain_R
CIKSSYAPW PRAILYGVL GLGALLAVF GNLLVIIAI LHFKQLHTP 
TNFLVASLA CADFLVGVT VMPFSTVRS VESCWYFGE SYCKFHTCF 
DTSFCFASL FHLCCISID RYIAVTDPL TYPTKFTVS VSGLCIALS 
WFFSVTYSF SIFYTGANE ETCVGGCQA PLNQNWVLL CFLLFFLPT 
VVMVFLYGR IFLVAKYQA RKIEGSYKE RVAKRERKA AKTLGIAMA 
AFLVSWLPY IIDAVIDAY MNFITPAYV YEILVWCVY YNSAMNPLI 
YAFFYPWFR KAIKLIVSG KVFRADSST TN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8IWMAOrphanOrphanTA9Mus musculus2-Phenylethylamine--3.172023-05-3110.1038/s41586-023-06106-4
8IWEAOrphanOrphanTA9Mus musculusSpermidine--3.42023-05-3110.1038/s41586-023-06106-4
8IW9AOrphanOrphanTA9Mus musculus--chim(NtGi1-Gs)/β1/γ23.082023-05-3110.1038/s41586-023-06106-4
8IW9 (No Gprot) AOrphanOrphanTA9Mus musculus--3.082023-05-3110.1038/s41586-023-06106-4
8IW7AOrphanOrphanTA9Mus musculus2-Phenylethylamine-chim(NtGi1-Gs)/β1/γ22.972023-05-3110.1038/s41586-023-06106-4
8IW7 (No Gprot) AOrphanOrphanTA9Mus musculus2-Phenylethylamine-2.972023-05-3110.1038/s41586-023-06106-4
8IW4AOrphanOrphanTA9Mus musculusSpermidine-chim(NtGi1-Gs)/β1/γ23.492023-05-3110.1038/s41586-023-06106-4
8IW4 (No Gprot) AOrphanOrphanTA9Mus musculusSpermidine-3.492023-05-3110.1038/s41586-023-06106-4
8IW1AOrphanOrphanTA9Mus musculus--chim(NtGi1-Gs)/β1/γ23.42023-05-3110.1038/s41586-023-06106-4
8IW1 (No Gprot) AOrphanOrphanTA9Mus musculus--3.42023-05-3110.1038/s41586-023-06106-4
8ITFAOrphanOrphanTA9Mus musculusDMCHA-chim(NtGi1-Gs)/β1/γ23.462023-05-3110.1038/s41586-023-06106-4
8ITF (No Gprot) AOrphanOrphanTA9Mus musculusDMCHA-3.462023-05-3110.1038/s41586-023-06106-4




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Download 8ITF_nogp.zip



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