Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 9.26833610
2R:R:T67 5.02438
3R:R:N68 6.2575439
4R:R:V81 4.9725407
5R:R:V85 6.39517
6R:R:M86 3.6775407
7R:R:F88 15.8275415
8R:R:W98 10.28818
9R:R:H108 7.79515
10R:R:F111 7.316515
11R:R:D112 7.41416
12R:R:F115 5.415407
13R:R:F117 8.73445
14R:R:F121 6.3975445
15R:R:H122 7.136578
16R:R:D136 4.0375406
17R:R:Y140 6.808537
18R:R:L184 5.785454
19R:R:F203 5.865426
20R:R:F206 8.316528
21R:R:L216 7.6575406
22R:R:F221 2.885405
23R:R:F267 5.36529
24R:R:W271 12.68628
25R:R:Y274 7.014506
26R:R:I275 7.6875427
27R:R:T288 4.695406
28R:R:W298 8.072505
29R:R:Y301 5.396518
30R:R:N307 7.71489
31R:R:Y311 6.5325489
32R:R:Y315 7.6025408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y301 66.12163.49YesYes108
2L:L:?1 R:R:D112 49.875310.77YesYes106
3R:R:D112 R:R:V85 50.27987.3YesYes167
4R:R:V81 R:R:V85 79.80924.81YesYes077
5R:R:S304 R:R:V81 81.50164.85NoYes097
6R:R:D78 R:R:S304 79.76877.36NoNo099
7R:R:A46 R:R:D78 11.95134.63NoNo079
8R:R:A305 R:R:A46 10.651.79NoNo077
9R:R:V85 R:R:Y301 53.80965.05YesYes178
10R:R:F111 R:R:V85 21.72487.87YesYes157
11R:R:D78 R:R:N50 70.699913.46NoNo099
12R:R:A75 R:R:N50 38.42634.69NoNo099
13R:R:N50 R:R:P308 32.65468.15NoNo099
14R:R:A75 R:R:I54 36.19451.62NoNo098
15R:R:A72 R:R:I54 33.94921.62NoNo068
16R:R:A72 R:R:I57 32.81643.25NoNo067
17R:R:I57 R:R:N68 28.36292.83NoYes079
18R:R:N68 R:R:W317 14.73279.04YesNo096
19R:R:F318 R:R:W317 13.21568.02NoNo096
20R:R:N68 R:R:T67 11.64124.39YesYes398
21R:R:N307 R:R:P308 31.55553.26YesNo099
22R:R:L74 R:R:N307 18.356813.73NoYes099
23R:R:H122 R:R:L74 17.08929YesNo089
24R:R:H122 R:R:S73 11.9216.97YesNo789
25R:R:I153 R:R:S73 10.6512.39NoNo089
26R:R:F115 R:R:V81 11.6586.55YesYes077
27R:R:H108 R:R:V85 19.94476.92YesYes157
28R:R:S89 R:R:Y301 13.07063.82NoYes068
29R:R:F88 R:R:H108 11.67827.92YesYes155
30R:R:H108 R:R:W98 15.20813.75YesYes158
31R:R:F107 R:R:F111 11.236613.93NoYes055
32L:L:?1 R:R:Y274 10012.79YesYes006
33R:R:I275 R:R:Y274 90.09176.04YesYes076
34R:R:I275 R:R:W271 38.84095.87YesYes278
35R:R:L120 R:R:W271 14.466327.33NoYes078
36R:R:L120 R:R:P209 13.17514.93NoNo079
37R:R:F121 R:R:P209 10.57247.22YesNo059
38R:R:N307 R:R:Y311 14.33826.98YesYes899
39R:R:F206 R:R:I275 44.531715.07YesYes287
40R:R:F206 R:R:T210 20.0565.19YesNo286
41R:R:T210 R:R:V211 20.81791.59NoNo063
42R:R:V211 R:R:V212 19.56711.6NoNo036
43R:R:F206 R:R:F267 22.34856.43YesYes289
44R:R:F267 R:R:M213 42.05386.22YesNo098
45R:R:F267 R:R:W271 24.00714.01YesYes298
46R:R:M213 R:R:S127 39.74787.67NoNo088
47R:R:S127 R:R:Y217 37.435111.45NoNo089
48R:R:L216 R:R:V212 17.04542.98YesNo066
49R:R:L216 R:R:Y131 11.887319.93YesNo068
50R:R:L260 R:R:Y217 32.77939.38NoNo079
51L:L:?1 R:R:C202 30.66554.72YesNo005
52R:R:C202 R:R:L194 29.54963.17NoNo054
53R:R:L194 R:R:N173 28.44724.12NoNo044
54R:R:I167 R:R:N173 14.68212.83NoNo054
55R:R:A172 R:R:I167 10.75791.62NoNo065
56R:R:E174 R:R:N173 13.276210.52NoNo044
57R:R:E174 R:R:L180 10.653414.58NoNo042
58R:R:F221 R:R:L260 23.73071.22YesNo057
59R:R:F221 R:R:K225 16.63743.72YesNo055
60R:R:E253 R:R:K225 14.250617.55NoNo075
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D112 10.77 1 Yes Yes 0 6 0 1
L:L:?1 R:R:T113 17.54 1 Yes No 0 4 0 1
L:L:?1 R:R:C116 6.3 1 Yes No 0 7 0 1
L:L:?1 R:R:C202 4.72 1 Yes No 0 5 0 1
L:L:?1 R:R:Y274 12.79 1 Yes Yes 0 6 0 1
L:L:?1 R:R:Y301 3.49 1 Yes Yes 0 8 0 1
R:R:D112 R:R:V85 7.3 1 Yes Yes 6 7 1 2
R:R:V85 R:R:Y301 5.05 1 Yes Yes 7 8 2 1
R:R:S89 R:R:Y301 3.82 0 No Yes 6 8 2 1
R:R:C116 R:R:D112 4.67 1 No Yes 7 6 1 1
R:R:D112 R:R:Y301 6.9 1 Yes Yes 6 8 1 1
R:R:I275 R:R:Y274 6.04 2 Yes Yes 7 6 2 1
R:R:L296 R:R:Y274 8.21 0 No Yes 5 6 2 1
R:R:V297 R:R:Y274 5.05 0 No Yes 6 6 2 1
R:R:W298 R:R:Y301 7.72 0 Yes Yes 5 8 2 1
R:R:C202 R:R:L194 3.17 0 No No 5 4 1 2
R:R:Y274 R:R:Y293 2.98 0 Yes No 6 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8IW7_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.26
Number of Linked Nodes 246
Number of Links 266
Number of Hubs 32
Number of Links mediated by Hubs 118
Number of Communities 9
Number of Nodes involved in Communities 47
Number of Links involved in Communities 59
Path Summary
Number Of Nodes in MetaPath 61
Number Of Links MetaPath 60
Number of Shortest Paths 51707
Length Of Smallest Path 3
Average Path Length 14.7492
Length of Longest Path 34
Minimum Path Strength 1.405
Average Path Strength 6.88282
Maximum Path Strength 24.7
Minimum Path Correlation 0.7
Average Path Correlation 0.92481
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4
Average % Of Corr. Nodes 46.2549
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.5915
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodePEA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodePEA
NamePhenethylamine
Synonymsβ-phenethylamine
Identifier
FormulaC8 H12 N
Molecular Weight122.188
SMILES
PubChem448751
Formal Charge1
Total Atoms21
Total Chiral Atoms0
Total Bonds21
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ5QD04
Sequence
>8IW7_nogp_Chain_R
YGVLGLGAL LAVFGNLLV IIAILHFKQ LHTPTNFLV ASLACADFL 
VGVTVMPFS TVRSVESCW YFGESYCKF HTCFDTSFC FASLFHLCC 
ISIDRYIAV TDPLTYPTK FTVSVSGLC IALSWFFSV TYSFSIFYT 
GANEEGIEE LVVALTCVG GCQAPLNQN WVLLCFLLF FLPTVVMVF 
LYGRIFLVA KYQARKIEE RKAAKTLGI AMAAFLVSW LPYIIDAVI 
DAYMNFITP AYVYEILVW CVYYNSAMN PLIYAFFYP WFRKAIKLI 
V


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8IWMAOrphanOrphanTA9Mus musculus2-Phenylethylamine--3.172023-05-3110.1038/s41586-023-06106-4
8IWEAOrphanOrphanTA9Mus musculusSpermidine--3.42023-05-3110.1038/s41586-023-06106-4
8IW9AOrphanOrphanTA9Mus musculus--chim(NtGi1-Gs)/β1/γ23.082023-05-3110.1038/s41586-023-06106-4
8IW9 (No Gprot) AOrphanOrphanTA9Mus musculus--3.082023-05-3110.1038/s41586-023-06106-4
8IW7AOrphanOrphanTA9Mus musculus2-Phenylethylamine-chim(NtGi1-Gs)/β1/γ22.972023-05-3110.1038/s41586-023-06106-4
8IW7 (No Gprot) AOrphanOrphanTA9Mus musculus2-Phenylethylamine-2.972023-05-3110.1038/s41586-023-06106-4
8IW4AOrphanOrphanTA9Mus musculusSpermidine-chim(NtGi1-Gs)/β1/γ23.492023-05-3110.1038/s41586-023-06106-4
8IW4 (No Gprot) AOrphanOrphanTA9Mus musculusSpermidine-3.492023-05-3110.1038/s41586-023-06106-4
8IW1AOrphanOrphanTA9Mus musculus--chim(NtGi1-Gs)/β1/γ23.42023-05-3110.1038/s41586-023-06106-4
8IW1 (No Gprot) AOrphanOrphanTA9Mus musculus--3.42023-05-3110.1038/s41586-023-06106-4
8ITFAOrphanOrphanTA9Mus musculusDMCHA-chim(NtGi1-Gs)/β1/γ23.462023-05-3110.1038/s41586-023-06106-4
8ITF (No Gprot) AOrphanOrphanTA9Mus musculusDMCHA-3.462023-05-3110.1038/s41586-023-06106-4




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Download 8IW7_nogp.zip



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