Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:K22 7.672519
2L:L:P23 7.54667619
3L:L:L26 5.36419
4L:L:F35 3.105436
5L:L:V39 7.6875457
6L:L:N43 9.612555
7L:L:K48 10.2775467
8L:L:T52 8.0075448
9L:L:P53 7.7075447
10L:L:Q58 7.80833649
11L:L:V60 8.575468
12L:L:R62 6.3125466
13L:L:L63 7.815459
14L:L:Q69 9.0225469
15L:L:L76 6.7575436
16L:L:W78 8.02438
17L:L:I79 4.13438
18R:R:F40 4.96405
19R:R:L41 3.604506
20R:R:N56 5.01409
21R:R:M63 4.1175476
22R:R:M72 4.86254106
23R:R:Y76 7.2475407
24R:R:R77 6.5475478
25R:R:F87 4.998517
26R:R:W94 7.965617
27R:R:W102 8.478589
28R:R:F104 10.35407
29R:R:C109 5.74489
30R:R:H113 5.7675406
31R:R:Y116 7.336516
32R:R:Y121 6.3475417
33R:R:F129 3.635405
34R:R:Y135 7.96254128
35R:R:R148 7.55106
36R:R:V160 4.716507
37R:R:D171 7.8225404
38R:R:Y190 8.05833614
39R:R:N192 4.695411
40R:R:W195 7.33515
41R:R:F199 7.98415
42R:R:Y219 7.848528
43R:R:L244 5.4625427
44R:R:W252 6.934509
45R:R:Y255 7.89617
46R:R:Y256 8.448518
47R:R:H281 9.8375494
48R:R:E288 8.908515
49R:R:F292 7.484517
50R:R:L301 2.8275427
51R:R:Y302 5.748529
52R:R:F309 6.64578
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:K22 L:L:P23 75.17633.35YesYes199
2L:L:P23 R:R:Y116 29.112911.13YesYes196
3L:L:K22 R:R:W94 30.397811.6YesYes197
4R:R:W94 R:R:Y116 30.12529.65YesYes176
5L:L:P23 R:R:E288 18.1986.29YesYes195
6L:L:P23 R:R:F292 29.23745.78YesYes197
7R:R:E288 R:R:Y255 15.209616.83YesYes157
8L:L:K22 R:R:D187 1008.3YesNo093
9R:R:D187 R:R:F189 99.2974.78NoNo033
10R:R:F189 R:R:S178 98.59139.25NoNo031
11L:L:P53 R:R:S178 98.24673.56YesNo071
12L:L:P53 L:L:T52 50.68473.5YesYes478
13L:L:P53 L:L:Y28 49.666215.3YesNo478
14L:L:Q58 L:L:Y28 49.22333.38YesNo498
15L:L:Q58 L:L:T52 49.228211.34YesYes498
16L:L:F35 L:L:I59 33.02222.51YesNo069
17L:L:I59 L:L:I72 39.18512.94NoNo096
18L:L:A61 L:L:I72 41.23733.25NoNo096
19L:L:A61 L:L:V44 43.27363.39NoNo597
20L:L:V39 L:L:V44 47.38421.6YesNo577
21L:L:N43 L:L:V39 51.249214.78YesYes557
22L:L:K64 L:L:N43 73.63884.2NoYes085
23L:L:K45 L:L:K64 75.66342.87NoNo078
24L:L:K45 L:L:R62 85.76536.19NoYes076
25L:L:K48 L:L:R62 43.83268.66YesYes676
26L:L:K48 L:L:V60 45.84966.07YesYes678
27L:L:L50 L:L:V60 92.59938.94NoYes058
28L:L:L50 L:L:Q58 93.558311.98NoYes059
29L:L:Q69 L:L:R62 43.92127.01YesYes696
30L:L:Q69 L:L:V60 44.822115.76YesYes698
31L:L:L63 L:L:V70 10.24385.96YesNo099
32L:L:L63 L:L:N43 14.25348.24YesYes595
33L:L:F35 L:L:P74 26.90294.33YesNo368
34L:L:D73 L:L:P74 22.771512.88NoNo388
35L:L:D73 L:L:L76 20.71529.5NoYes386
36R:R:F87 R:R:Y116 58.54066.19YesYes176
37R:R:C295 R:R:F87 68.21844.19NoYes097
38R:R:F292 R:R:F87 35.9766.43YesYes177
39R:R:C295 R:R:D84 65.47156.22NoNo099
40R:R:D84 R:R:N56 18.58969.42NoYes099
41R:R:N56 R:R:S81 13.85762.98YesNo099
42R:R:S81 R:R:V59 12.49116.46NoNo098
43R:R:F309 R:R:V59 11.10873.93YesNo788
44R:R:D84 R:R:N298 49.53756.73NoNo099
45R:R:L80 R:R:N298 48.94938.24NoNo099
46R:R:L80 R:R:Y302 34.47733.52NoYes099
47R:R:I130 R:R:Y302 12.81914.84NoYes289
48R:R:I130 R:R:Y76 13.33456.04NoYes087
49R:R:I126 R:R:L80 14.5984.28NoNo079
50R:R:I126 R:R:V160 13.94344.61NoYes077
51R:R:F87 R:R:H294 29.57234.53YesNo079
52L:L:K22 R:R:H113 18.98195.24YesYes096
53R:R:H294 R:R:W252 24.538712.7NoYes099
54R:R:W252 R:R:Y256 11.10668.68YesYes098
55R:R:F248 R:R:W252 27.48487.02NoYes099
56R:R:F248 R:R:F249 26.03949.65NoNo1394
57R:R:F249 R:R:L216 25.43888.53NoNo044
58R:R:I245 R:R:L216 24.16094.28NoNo074
59R:R:I245 R:R:Y219 23.51958.46NoYes078
60R:R:L244 R:R:Y302 22.23537.03YesYes279
61R:R:L244 R:R:Y219 19.08227.03YesYes278
62R:R:S131 R:R:Y219 14.772312.72NoYes298
63R:R:C218 R:R:S131 13.45016.89NoNo069
64R:R:C218 R:R:Y135 10.7715.38NoYes068
65R:R:T241 R:R:Y219 21.45414.99NoYes078
66R:R:I223 R:R:T241 20.12366.08NoNo047
67R:R:I223 R:R:L238 16.12365.71NoNo045
68R:R:L238 R:R:R235 14.78752.43NoNo055
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:K22 R:R:W94 11.6 1 Yes Yes 9 7 0 1
L:L:K22 R:R:H113 5.24 1 Yes Yes 9 6 0 1
L:L:K22 R:R:D187 8.3 1 Yes No 9 3 0 1
L:L:P23 R:R:W94 12.16 1 Yes Yes 9 7 0 1
L:L:P23 R:R:Y116 11.13 1 Yes Yes 9 6 0 1
L:L:P23 R:R:E288 6.29 1 Yes Yes 9 5 0 1
L:L:P23 R:R:F292 5.78 1 Yes Yes 9 7 0 1
L:L:V24 R:R:Y255 3.79 1 No Yes 7 7 0 1
L:L:V24 R:R:I259 4.61 1 No No 7 5 0 1
L:L:V24 R:R:E288 4.28 1 No Yes 7 5 0 1
L:L:S25 R:R:S285 4.89 0 No No 9 5 0 1
L:L:S25 R:R:E288 4.31 0 No Yes 9 5 0 1
L:L:L26 R:R:W94 3.42 1 Yes Yes 9 7 0 1
L:L:R29 R:R:R30 3.2 0 No No 9 5 0 1
L:L:R29 R:R:D262 5.96 0 No No 9 5 0 1
L:L:R29 R:R:L266 6.07 0 No No 9 3 0 1
L:L:P31 R:R:F29 4.33 0 No No 7 4 0 1
L:L:F34 R:R:E268 10.49 0 No No 6 2 0 1
L:L:P53 R:R:S178 3.56 4 Yes No 7 1 0 1
L:L:P53 R:R:I185 8.47 4 Yes No 7 3 0 1
L:L:N54 R:R:F189 12.08 0 No No 8 3 0 1
L:L:V60 R:R:P27 3.53 6 Yes No 8 5 0 1
L:L:R68 R:R:E26 3.49 0 No No 8 2 0 1
L:L:Q69 R:R:P27 7.9 6 Yes No 9 5 0 1
R:R:E26 R:R:K25 9.45 0 No No 2 4 1 2
R:R:F29 R:R:P27 8.67 0 No No 4 5 1 1
R:R:H281 R:R:R30 15.8 9 Yes No 4 5 2 1
R:R:L41 R:R:N37 4.12 0 Yes No 6 3 2 2
R:R:H281 R:R:N37 3.83 9 Yes No 4 3 2 2
R:R:N37 R:R:S285 5.96 9 No No 3 5 2 1
R:R:L41 R:R:Y45 7.03 0 Yes No 6 7 2 2
R:R:F292 R:R:Y45 6.19 1 Yes No 7 7 1 2
R:R:F87 R:R:Y116 6.19 1 Yes Yes 7 6 2 1
R:R:F87 R:R:L120 3.65 1 Yes No 7 7 2 2
R:R:F292 R:R:F87 6.43 1 Yes Yes 7 7 1 2
R:R:T90 R:R:W94 6.06 0 No Yes 6 7 2 1
R:R:V112 R:R:W94 4.9 0 No Yes 5 7 2 1
R:R:W94 R:R:Y116 9.65 1 Yes Yes 7 6 1 1
R:R:C109 R:R:H113 4.42 8 Yes Yes 9 6 2 1
R:R:D171 R:R:H113 7.56 0 Yes Yes 4 6 2 1
R:R:A175 R:R:H113 5.85 0 No Yes 4 6 2 1
R:R:L120 R:R:Y116 3.52 1 No Yes 7 6 2 1
R:R:F292 R:R:Y116 6.19 1 Yes Yes 7 6 1 1
R:R:F189 R:R:S178 9.25 0 No No 3 1 1 1
R:R:I185 R:R:R183 3.76 0 No No 3 3 1 2
R:R:D187 R:R:F189 4.78 0 No No 3 3 1 1
R:R:L266 R:R:V197 4.47 0 No No 3 3 1 2
R:R:D262 R:R:Q200 5.22 0 No No 5 5 1 2
R:R:H203 R:R:Y255 4.36 1 No Yes 4 7 2 1
R:R:H203 R:R:Y256 10.89 1 No Yes 4 8 2 2
R:R:Y255 R:R:Y256 8.94 1 Yes Yes 7 8 1 2
R:R:I259 R:R:Y255 9.67 1 No Yes 5 7 1 1
R:R:T287 R:R:Y255 3.75 0 No Yes 6 7 2 1
R:R:E288 R:R:Y255 16.83 1 Yes Yes 5 7 1 1
R:R:D262 R:R:I284 4.2 0 No No 5 4 1 2
R:R:H281 R:R:S285 6.97 9 Yes No 4 5 2 1
R:R:E288 R:R:F292 12.83 1 Yes Yes 5 7 1 1
L:L:S27 R:R:D187 2.94 0 No No 6 3 0 1
R:R:I204 R:R:I259 2.94 0 No No 5 5 2 1
R:R:A180 R:R:I185 1.62 0 No No 1 3 2 1
L:L:L26 R:R:A98 1.58 1 Yes No 9 5 0 1
R:R:A98 R:R:L41 1.58 0 No Yes 5 6 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8K3Z_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.2
Number of Linked Nodes 329
Number of Links 383
Number of Hubs 52
Number of Links mediated by Hubs 186
Number of Communities 13
Number of Nodes involved in Communities 85
Number of Links involved in Communities 114
Path Summary
Number Of Nodes in MetaPath 69
Number Of Links MetaPath 68
Number of Shortest Paths 212314
Length Of Smallest Path 3
Average Path Length 23.1747
Length of Longest Path 45
Minimum Path Strength 1.36
Average Path Strength 6.66711
Maximum Path Strength 17.03
Minimum Path Correlation 0.71
Average Path Correlation 0.946268
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.63158
Average % Of Corr. Nodes 41.9738
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.26
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development
Gene OntologyBiological Process• multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • intracellular anatomical structure   • cytoplasm   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • neuropeptide signaling pathway   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • cell surface receptor signaling pathway   • response to cytokine   • response to chemokine   • cytokine-mediated signaling pathway   • cellular response to chemokine   • chemokine-mediated signaling pathway   • response to peptide   • cellular response to cytokine stimulus   • multicellular organismal process   • system process   • relaxation of smooth muscle   • regulation of system process   • regulation of muscle system process   • muscle system process   • relaxation of muscle   • positive regulation of relaxation of smooth muscle   • positive regulation of relaxation of muscle   • positive regulation of multicellular organismal process   • regulation of multicellular organismal process   • regulation of relaxation of smooth muscle   • regulation of relaxation of muscle   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • sperm principal piece   • 9+2 motile cilium   • sperm flagellum   • motile cilium   • nucleoplasm   • Golgi apparatus   • endomembrane system   • ciliary basal body   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • molecular function activator activity   • signaling receptor regulator activity   • growth factor activity   • receptor ligand activity   • signaling receptor activator activity   • cytokine receptor binding   • chemokine receptor binding   • chemokine activity   • cytokine activity   • CXCR chemokine receptor binding   • cell adhesion molecule binding   • integrin binding   • cellular component biogenesis   • cellular component assembly   • protein-containing complex organization   • protein-containing complex assembly   • integrin activation   • response to mechanical stimulus   • response to abiotic stimulus   • response to external stimulus   • response to ultrasound   • chemokine (C-X-C motif) ligand 12 signaling pathway   • developmental process   • head development   • forebrain development   • animal organ development   • brain development   • nervous system development   • multicellular organism development   • telencephalon cell migration   • central nervous system development   • forebrain cell migration   • anatomical structure development   • telencephalon development   • system development   • inorganic ion homeostasis   • intracellular calcium ion homeostasis   • homeostatic process   • calcium ion homeostasis   • cellular homeostasis   • chemical homeostasis   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • intracellular chemical homeostasis   • monoatomic cation homeostasis   • intracellular monoatomic ion homeostasis   • defense response   • response to stress   • regulation of actin filament-based process   • regulation of cellular component size   • actin filament-based process   • actin polymerization or depolymerization   • regulation of actin filament organization   • actin cytoskeleton organization   • regulation of actin polymerization or depolymerization   • actin filament organization   • regulation of actin filament length   • regulation of actin cytoskeleton organization   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • regulation of anatomical structure size   • chemotaxis   • taxis   • locomotion   • detection of external stimulus   • nervous system process   • sensory perception of temperature stimulus   • sensory perception of pain   • detection of temperature stimulus involved in sensory perception   • response to temperature stimulus   • detection of abiotic stimulus   • detection of stimulus   • sensory perception   • detection of temperature stimulus   • detection of stimulus involved in sensory perception   • detection of temperature stimulus involved in sensory perception of pain   • cell chemotaxis   • positive regulation of monocyte chemotaxis   • positive regulation of locomotion   • regulation of cell motility   • regulation of response to external stimulus   • positive regulation of chemotaxis   • positive regulation of cell migration   • regulation of monocyte chemotaxis   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of cell motility   • regulation of cell migration   • myeloid leukocyte migration   • positive regulation of mononuclear cell migration   • regulation of immune system process   • regulation of mononuclear cell migration   • positive regulation of immune system process   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • regulation of chemotaxis   • monocyte chemotaxis   • regulation of response to stimulus   • regulation of locomotion   • leukocyte chemotaxis   • regulation of calcium ion import   • regulation of calcium ion transport   • positive regulation of calcium ion transport   • positive regulation of calcium ion import   • regulation of monoatomic ion transport   • calcium ion transport   • metal ion transport   • positive regulation of transport   • positive regulation of monoatomic ion transport   • monoatomic ion transport   • calcium ion import   • monoatomic cation transport   • regulation of metal ion transport   • regulation of lymphocyte migration   • positive regulation of lymphocyte migration   • positive regulation of T cell migration   • regulation of T cell migration   • cell adhesion   • response to decreased oxygen levels   • response to hypoxia   • response to oxygen levels   • negative regulation of intracellular signal transduction   • regulation of cellular response to stress   • regulation of signal transduction   • regulation of intrinsic apoptotic signaling pathway in response to DNA damage   • regulation of programmed cell death   • regulation of intrinsic apoptotic signaling pathway   • intracellular signal transduction   • cellular response to stress   • regulation of intracellular signal transduction   • negative regulation of apoptotic signaling pathway   • regulation of response to stress   • intrinsic apoptotic signaling pathway in response to DNA damage   • intrinsic apoptotic signaling pathway   • negative regulation of response to stimulus   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • negative regulation of signal transduction   • negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage   • apoptotic signaling pathway   • negative regulation of intrinsic apoptotic signaling pathway   • negative regulation of apoptotic process   • DNA damage response   • apoptotic process   • programmed cell death   • regulation of apoptotic signaling pathway   • adult locomotory behavior   • behavior   • adult behavior   • locomotory behavior   • detection of mechanical stimulus involved in sensory perception of pain   • detection of mechanical stimulus involved in sensory perception   • sensory perception of mechanical stimulus   • detection of mechanical stimulus   • positive chemotaxis   • positive regulation of positive chemotaxis   • induction of positive chemotaxis   • regulation of positive chemotaxis   • immune response   • axon extension   • positive regulation of nervous system development   • regulation of growth   • axonogenesis   • developmental growth   • cell projection organization   • regulation of cell differentiation   • regulation of neurogenesis   • neuron projection development   • regulation of cell development   • positive regulation of axon extension involved in axon guidance   • positive regulation of developmental process   • cell projection morphogenesis   • neuron differentiation   • neuron projection morphogenesis   • cell differentiation   • positive regulation of cell projection organization   • positive regulation of developmental growth   • regulation of cell projection organization   • positive regulation of cell development   • developmental growth involved in morphogenesis   • generation of neurons   • regulation of neuron projection development   • positive regulation of cellular component organization   • cellular developmental process   • regulation of developmental process   • plasma membrane bounded cell projection morphogenesis   • cell development   • cell growth   • cell morphogenesis   • regulation of axon extension   • regulation of nervous system development   • neurogenesis   • regulation of axon extension involved in axon guidance   • regulation of extent of cell growth   • positive regulation of cell differentiation   • regulation of axonogenesis   • positive regulation of neurogenesis   • axon extension involved in axon guidance   • positive regulation of axon extension   • positive regulation of axonogenesis   • regulation of anatomical structure morphogenesis   • regulation of cell size   • neuron projection extension   • regulation of multicellular organismal development   • regulation of developmental growth   • plasma membrane bounded cell projection organization   • developmental cell growth   • growth   • axon guidance   • positive regulation of cell growth   • axon development   • regulation of cell growth   • cell morphogenesis involved in neuron differentiation   • anatomical structure morphogenesis   • positive regulation of growth   • neuron projection guidance   • neuron development   • regulation of plasma membrane bounded cell projection organization   • CXCL12-activated CXCR4 signaling pathway   • C-X-C chemokine receptor CXCR4 signaling pathway   • negative regulation of locomotion   • regulation of leukocyte adhesion to vascular endothelial cell   • leukocyte cell-cell adhesion   • negative regulation of cell adhesion   • leukocyte tethering or rolling   • negative regulation of leukocyte tethering or rolling   • cell-cell adhesion   • negative regulation of cellular extravasation   • cellular extravasation   • regulation of cell-cell adhesion   • negative regulation of cell migration   • regulation of cell adhesion   • negative regulation of leukocyte adhesion to vascular endothelial cell   • regulation of leukocyte tethering or rolling   • negative regulation of leukocyte migration   • negative regulation of leukocyte cell-cell adhesion   • negative regulation of immune system process   • leukocyte adhesion to vascular endothelial cell   • negative regulation of cell-cell adhesion   • regulation of leukocyte cell-cell adhesion   • negative regulation of cell motility   • regulation of cellular extravasation   • monoamine transport   • regulation of catecholamine secretion   • organic hydroxy compound transport   • positive regulation of secretion by cell   • dopamine transport   • positive regulation of amine transport   • catecholamine transport   • positive regulation of secretion   • positive regulation of catecholamine secretion   • dopamine secretion   • positive regulation of dopamine secretion   • catecholamine secretion   • amine transport   • regulation of amine transport   • regulation of dopamine secretion   • vasculature development   • regulation of vasculature development   • circulatory system development   • positive regulation of vasculature development   • regulation of leukocyte apoptotic process   • dendritic cell apoptotic process   • negative regulation of dendritic cell apoptotic process   • leukocyte apoptotic process   • negative regulation of leukocyte apoptotic process   • regulation of dendritic cell apoptotic process   • positive regulation of cell adhesion   • positive regulation of neuron differentiation   • regulation of neuron differentiation   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to external biotic stimulus   • response to virus   • response to biotic stimulus   • neuron migration   • animal organ regeneration   • regeneration   • positive regulation of cell population proliferation   • endothelial cell proliferation   • positive regulation of epithelial cell proliferation   • regulation of endothelial cell proliferation   • regulation of cell population proliferation   • positive regulation of endothelial cell proliferation   • regulation of epithelial cell proliferation   • epithelial cell proliferation   • circulatory system process   • blood circulation   • cell surface   • external side of plasma membrane   • extracellular matrix   • external encapsulating structure   • molecular transducer activity   • coreceptor activity   • signaling receptor activity   • cytoskeletal protein binding   • myosin light chain binding   • myosin binding   • C-C chemokine binding   • chemokine binding   • cytokine binding   • G protein-coupled chemoattractant receptor activity   • C-X-C motif chemokine 12 receptor activity   • C-X-C chemokine receptor activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • ubiquitin protein ligase binding   • ubiquitin-like protein ligase binding   • enzyme binding   • virus receptor activity   • exogenous protein binding   • C-C chemokine receptor activity   • ubiquitin binding   • ubiquitin-like protein binding   • actin binding   • membrane organization   • myelination   • myelin maintenance   • axon ensheathment   • ensheathment of neurons   • plasma membrane organization   • endomembrane system organization   • dendritic cell chemotaxis   • dendritic cell migration   • positive regulation of cytosolic calcium ion concentration   • calcium-mediated signaling   • intracellular signaling cassette   • positive regulation of cell communication   • positive regulation of signal transduction   • positive regulation of macrophage migration inhibitory factor signaling pathway   • positive regulation of response to cytokine stimulus   • macrophage migration inhibitory factor signaling pathway   • regulation of macrophage migration inhibitory factor signaling pathway   • regulation of cytokine-mediated signaling pathway   • regulation of response to cytokine stimulus   • positive regulation of cytokine-mediated signaling pathway   • positive regulation of signaling   • adaptive thermogenesis   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • inflammatory response   • regulation of gliogenesis   • positive regulation of gliogenesis   • gliogenesis   • positive regulation of oligodendrocyte differentiation   • regulation of glial cell differentiation   • positive regulation of glial cell differentiation   • oligodendrocyte differentiation   • glial cell differentiation   • regulation of oligodendrocyte differentiation   • cell leading edge   • anchoring junction   • cytoplasmic vesicle   • intracellular vesicle   • early endosome   • endosome   • late endosome
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines   • G protein-coupled receptor-like
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainL
ProteinCXCL12
UniProtP48061
Sequence
>8K3Z_nogp_Chain_L
KPVSLSYRC PCRFFESHV ARANVKHLK ILNTPNCAL QIVARLKNN 
NRQVCIDPK LKWIQEYL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainR
ProteinReceptor
UniProtP61073
Sequence
>8K3Z_nogp_Chain_R
KEPCFREEN ANFNKIFLP TIYSIIFLT GIVGNGLVI LVMGYQKKL 
RSMTDKYRL HLSVADLLF VITLPFWAV DAVANWYFG NFLCKAVHV 
IYTVNLYSS VLILAFISL DRYLAIVHA TNSQRPRKL LAEKVVYVG 
VWIPALLLT IPDFIFANV SEADDRYIC DRFYPNDLW VVVFQFQHI 
MVGLILPGI VILSCYCII ISKLSHSKG HQKRKALKT TVILILAFF 
ACWLPYYIG ISIDSFILL EIIKQGCEF ENTVHKWIS ITEALAFFH 
CCLNPILYA FLGAKFKTS AQHALTSV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
3ODUAProteinChemokineCXCR4Homo sapiensIT1t--2.52010-10-27doi.org/10.1126/science.1194396
3OE0AProteinChemokineCXCR4Homo sapiensCVX15--2.92010-10-27doi.org/10.1126/science.1194396
3OE6AProteinChemokineCXCR4Homo sapiensIT1t--3.22010-10-27doi.org/10.1126/science.1194396
3OE8AProteinChemokineCXCR4Homo sapiensIT1t--3.12010-10-27doi.org/10.1126/science.1194396
3OE9AProteinChemokineCXCR4Homo sapiensIT1t--3.12010-10-27doi.org/10.1126/science.1194396
4RWSAProteinChemokineCXCR4Homo sapiensvMIP-II--3.12015-02-11doi.org/10.1126/science.1261064
8K3ZAProteinChemokineCXCR4Homo sapiensCXCL12-Gi1/β1/γ12.812024-07-17doi.org/10.1016/j.celrep.2024.114578
8K3Z (No Gprot) AProteinChemokineCXCR4Homo sapiensCXCL12-2.812024-07-17doi.org/10.1016/j.celrep.2024.114578
8ZPLAProteinChemokineCXCR4Homo sapiensHF51116--3.012025-02-26doi.org/10.1073/pnas.2425795122
8ZPMAProteinChemokineCXCR4Homo sapiensAMD070--3.22025-02-26doi.org/10.1073/pnas.2425795122
8ZPNAProteinChemokineCXCR4Homo sapiensAMD3100--3.312025-02-26doi.org/10.1073/pnas.2425795122
8YU7AProteinChemokineCXCR4Homo sapiens---3.012025-03-05doi.org/10.1016/j.celrep.2025.115255
9MDUAProteinChemokineCXCR4Homo sapiens---2.92025-09-10To be published
9ME1AProteinChemokineCXCR4Homo sapiensCXCL12--3.372025-09-10To be published
9MEJAProteinChemokineCXCR4Homo sapiensGp120--3.992025-09-10To be published
9MENAProteinChemokineCXCR4Homo sapiensGp120 (V3 loop)--3.572025-09-10To be published
9METAProteinChemokineCXCR4Homo sapiensGp120; CD4--5.652025-09-10To be published
9MEUAProteinChemokineCXCR4Homo sapiensCXCL12--3.462025-09-10To be published
8U4NAProteinChemokineCXCR4Homo sapiens--Gi1/β1/γ22.722024-03-13doi.org/10.1101/2024.02.09.579708
8U4N (No Gprot) AProteinChemokineCXCR4Homo sapiens--2.722024-03-13doi.org/10.1101/2024.02.09.579708
8U4OAProteinChemokineCXCR4Homo sapiensCXCL12-Gi1/β1/γ23.292024-03-13doi.org/10.1101/2024.02.09.579708
8U4O (No Gprot) AProteinChemokineCXCR4Homo sapiensCXCL12-3.292024-03-13doi.org/10.1101/2024.02.09.579708
8U4PAProteinChemokineCXCR4Homo sapiensAMD3100-Gi1/β1/γ23.152024-03-13doi.org/10.1101/2024.02.09.579708
8U4P (No Gprot) AProteinChemokineCXCR4Homo sapiensAMD3100-3.152024-03-13doi.org/10.1101/2024.02.09.579708
8U4QAProteinChemokineCXCR4Homo sapiensREGN7663-Fab-Gi1/β1/γ23.362024-03-13doi.org/10.1101/2024.02.09.579708
8U4Q (No Gprot) AProteinChemokineCXCR4Homo sapiensREGN7663-Fab-3.362024-03-13doi.org/10.1101/2024.02.09.579708
8U4RAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.12024-03-13doi.org/10.1101/2024.02.09.579708
8U4SAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.352024-03-13doi.org/10.1038/s41594-024-01397-1
8U4TAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.382024-03-13doi.org/10.1038/s41594-024-01397-1




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