Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:L41 6.3325406
2R:R:Y45 7.3225417
3R:R:N56 5.0225409
4R:R:V59 3.1775428
5R:R:Q66 5.34424
6R:R:D74 4.13528
7R:R:Y76 6.0925407
8R:R:R77 3.826528
9R:R:D84 5.298519
10R:R:F87 6.75517
11R:R:V88 3.065406
12R:R:W94 5.72333617
13R:R:W102 7.125619
14R:R:F104 5.83507
15R:R:H113 5.36667616
16R:R:Y116 3.925416
17R:R:Y121 5.1125467
18R:R:I126 5.435407
19R:R:F129 2.7175405
20R:R:I130 5.32448
21R:R:Y135 5.608588
22R:R:V160 4.942577
23R:R:W161 3.935479
24R:R:F174 4.49534
25R:R:Y190 8.246534
26R:R:W195 4.954535
27R:R:F199 5.73435
28R:R:P211 2.6775409
29R:R:C218 3.03406
30R:R:Y219 5.392508
31R:R:L226 2.1675408
32R:R:T241 3.545407
33R:R:W252 6.376509
34R:R:Y255 5.7175407
35R:R:Y256 6.654508
36R:R:I284 2.675404
37R:R:E288 6.8415
38R:R:F292 6.4517
39R:R:H294 8.55419
40R:R:C295 4.1575419
41R:R:L301 2.4825407
42R:R:F304 3.195426
43R:R:F309 6.378528
44L:L:K1 5.25167610
45L:L:P2 6.315410
46L:L:L5 4.255410
47L:L:T31 6.47754100
48L:L:Q37 7.284100
49L:L:I51 5.37254110
50L:L:I58 4.108500
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:L42 L:L:V49 37.63564.47NoNo000
2L:L:L42 L:L:N22 38.90198.24NoNo000
3L:L:K43 L:L:N22 41.41794.2NoNo000
4L:L:K24 L:L:K43 42.66742.87NoNo000
5L:L:H25 L:L:K24 45.149817.03NoNo000
6L:L:H25 L:L:R41 46.382612.41NoNo000
7L:L:Q48 L:L:R41 47.609915.19NoNo000
8L:L:Q48 R:R:P27 51.2583.16NoNo005
9L:L:C11 R:R:P27 56.04383.77NoNo005
10L:L:C11 L:L:Q37 58.40043.05NoYes000
11L:L:Q37 L:L:T31 62.655212.76YesYes1000
12L:L:T31 L:L:Y7 72.07313.75YesNo000
13L:L:Y7 R:R:D187 75.3693.45NoNo003
14L:L:K1 R:R:D187 77.538311.06YesNo003
15L:L:K1 L:L:P2 47.66863.35YesYes100
16L:L:P2 R:R:F292 57.31862.89YesYes107
17R:R:E288 R:R:F292 44.19948.16YesYes157
18R:R:E288 R:R:Y255 62.06814.49YesYes057
19R:R:I259 R:R:Y255 70.54412.09NoYes057
20R:R:I259 R:R:Q200 57.39415.49NoNo055
21R:R:D262 R:R:Q200 51.67456.53NoNo055
22R:R:D262 R:R:I284 49.75682.8NoYes054
23R:R:I284 R:R:V280 31.96083.07YesNo045
24R:R:F276 R:R:V280 18.18743.93NoNo015
25L:L:K1 L:L:L5 20.59434.23YesYes100
26L:L:L5 L:L:S4 19.30283YesNo000
27L:L:S4 R:R:E288 20.890610.06NoYes005
28L:L:K1 R:R:H113 15.00625.24YesYes106
29R:R:D171 R:R:H113 33.94556.3NoYes046
30R:R:D171 R:R:R188 32.53111.91NoNo045
31R:R:R188 R:R:Y190 17.776516.46NoYes354
32R:R:F292 R:R:Y45 16.95747.22YesYes177
33R:R:L91 R:R:Y45 17.4412.34NoYes087
34R:R:I48 R:R:L91 16.31722.85NoNo078
35L:L:K1 R:R:W94 27.89333.48YesYes107
36R:R:W94 R:R:Y116 58.80022.89YesYes176
37R:R:F87 R:R:Y116 50.18454.13YesYes176
38R:R:C295 R:R:F87 86.44475.59YesYes197
39R:R:C295 R:R:V88 10.10573.42YesYes096
40R:R:F292 R:R:F87 49.77648.57YesYes177
41R:R:C295 R:R:D84 1004.67YesYes199
42R:R:D84 R:R:N56 30.81466.73YesYes099
43R:R:N56 R:R:S81 26.76392.98YesNo099
44R:R:S81 R:R:V59 25.3974.85NoYes098
45R:R:D84 R:R:L80 94.86474.07YesNo199
46R:R:I126 R:R:L80 94.03444.28YesNo079
47R:R:H79 R:R:I126 18.38875.3NoYes097
48R:R:R77 R:R:V59 14.21782.62YesYes288
49R:R:I126 R:R:I130 62.29732.94YesYes078
50R:R:I130 R:R:Y76 10.4026.04YesYes087
51R:R:H79 R:R:K75 11.3862.62NoNo096
52R:R:I126 R:R:V160 19.57969.22YesYes077
53R:R:F87 R:R:H294 12.308510.18YesYes179
54R:R:H294 R:R:S123 19.05128.37YesNo099
55L:L:K1 R:R:D97 19.58244.15YesNo005
56R:R:D97 R:R:W102 16.999310.05NoYes059
57R:R:V112 R:R:W94 11.77744.9NoYes057
58R:R:F93 R:R:V112 10.68719.18NoNo065
59R:R:F104 R:R:Y103 12.25262.06YesNo073
60R:R:N101 R:R:Y103 10.740219.77NoNo043
61R:R:V177 R:R:W102 13.36523.68NoYes049
62R:R:Y255 R:R:Y256 38.16674.96YesYes078
63R:R:H203 R:R:Y256 16.75337.62NoYes048
64R:R:H203 R:R:Y121 14.91397.62NoYes047
65R:R:H294 R:R:W252 48.66112.7YesYes099
66R:R:V124 R:R:W252 10.50542.45NoYes079
67R:R:I130 R:R:R134 50.39986.26YesNo489
68R:R:R134 R:R:Y219 49.31796.17NoYes098
69R:R:S131 R:R:Y219 21.46653.82NoYes098
70R:R:S131 R:R:V214 18.67661.62NoNo096
71R:R:C218 R:R:V214 17.27331.71YesNo066
72R:R:C218 R:R:Y135 11.6045.38YesYes068
73R:R:F174 R:R:R188 13.33175.34YesNo345
74R:R:I204 R:R:I259 12.25825.89NoNo055
75R:R:I204 R:R:S260 10.22873.1NoNo055
76R:R:T241 R:R:Y219 18.67664.99YesYes078
77R:R:I261 R:R:V280 12.16873.07NoNo055
78R:R:I257 R:R:I261 20.12471.47NoNo065
79R:R:I257 R:R:L253 16.11044.28NoNo065
80R:R:G258 R:R:I284 13.9971.76NoYes044
81R:R:G258 R:R:I261 12.01781.76NoNo045
82R:R:L253 R:R:P254 12.09054.93NoNo059
83L:L:I58 L:L:P53 11.22391.69YesNo000
84L:L:I51 L:L:I58 24.73164.42YesYes000
85L:L:I51 L:L:V49 29.94243.07YesNo000
86R:R:H113 R:R:W94 27.49647.41YesYes167
87R:R:W252 R:R:Y256 34.3765.79YesYes098
88R:R:C295 R:R:H294 19.81722.95YesYes199
89R:R:D84 R:R:S123 18.46142.94YesNo099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:F13 R:R:K25 3.72 0 No No 0 4 0 1
L:L:V49 R:R:K25 4.55 0 No No 0 4 0 1
L:L:R47 R:R:E26 6.98 0 No No 0 2 0 1
L:L:C11 R:R:P27 3.77 0 No No 0 5 0 1
L:L:Q48 R:R:P27 3.16 0 No No 0 5 0 1
L:L:R8 R:R:R30 3.2 0 No No 0 5 0 1
R:R:L41 R:R:Y45 15.24 0 Yes Yes 6 7 2 2
R:R:E288 R:R:Y45 4.49 1 Yes Yes 5 7 1 2
R:R:F292 R:R:Y45 7.22 1 Yes Yes 7 7 1 2
R:R:F87 R:R:Y116 4.13 1 Yes Yes 7 6 2 2
R:R:F292 R:R:F87 8.57 1 Yes Yes 7 7 1 2
R:R:T90 R:R:W94 4.85 0 No Yes 6 7 2 1
R:R:V112 R:R:W94 4.9 0 No Yes 5 7 2 1
R:R:H113 R:R:W94 7.41 1 Yes Yes 6 7 1 1
R:R:W94 R:R:Y116 2.89 1 Yes Yes 7 6 1 2
L:L:K1 R:R:W94 3.48 1 Yes Yes 0 7 0 1
L:L:P2 R:R:W94 10.81 1 Yes Yes 0 7 0 1
R:R:D97 R:R:W102 10.05 0 No Yes 5 9 1 2
R:R:D97 R:R:I185 4.2 0 No No 5 3 1 2
L:L:K1 R:R:D97 4.15 1 Yes No 0 5 0 1
R:R:C109 R:R:W102 5.22 1 No Yes 9 9 2 2
R:R:C186 R:R:W102 14.37 1 No Yes 9 9 2 2
R:R:C109 R:R:H113 2.95 1 No Yes 9 6 2 1
R:R:C109 R:R:C186 7.28 1 No No 9 9 2 2
R:R:D171 R:R:H113 6.3 0 No Yes 4 6 2 1
R:R:A175 R:R:H113 2.93 0 No Yes 4 6 2 1
R:R:C186 R:R:H113 7.37 1 No Yes 9 6 2 1
L:L:K1 R:R:H113 5.24 1 Yes Yes 0 6 0 1
R:R:F292 R:R:Y116 5.16 1 Yes Yes 7 6 1 2
R:R:F189 R:R:S178 6.61 9 No No 3 1 1 1
L:L:N33 R:R:S178 5.96 9 No No 0 1 0 1
L:L:K1 R:R:D187 11.06 1 Yes No 0 3 0 1
L:L:S6 R:R:D187 5.89 0 No No 0 3 0 1
L:L:Y7 R:R:D187 3.45 0 No No 0 3 0 1
L:L:N33 R:R:F189 26.58 9 No No 0 3 0 1
L:L:R12 R:R:D193 19.06 0 No No 0 1 0 1
R:R:L266 R:R:V196 2.98 0 No No 3 4 1 2
R:R:L266 R:R:V197 2.98 0 No No 3 3 1 2
R:R:E288 R:R:Y255 4.49 1 Yes Yes 5 7 1 2
R:R:D262 R:R:I284 2.8 0 No Yes 5 4 2 1
L:L:R8 R:R:L266 7.29 0 No No 0 3 0 1
L:L:F13 R:R:E268 18.66 0 No No 0 2 0 1
R:R:I284 R:R:V280 3.07 0 Yes No 4 5 1 2
L:L:V3 R:R:I284 3.07 0 No Yes 0 4 0 1
L:L:S4 R:R:S285 4.89 0 No No 0 5 0 1
R:R:E288 R:R:F292 8.16 1 Yes Yes 5 7 1 1
L:L:S4 R:R:E288 10.06 0 No Yes 0 5 0 1
L:L:P2 R:R:F292 2.89 1 Yes Yes 0 7 0 1
R:R:H281 R:R:S285 2.79 0 No No 4 5 2 1
R:R:G258 R:R:I284 1.76 0 No Yes 4 4 2 1
R:R:A98 R:R:L41 1.58 0 No Yes 5 6 1 2
L:L:L5 R:R:A98 1.58 1 Yes No 0 5 0 1
R:R:E26 R:R:P27 1.57 0 No No 2 5 1 1
L:L:P10 R:R:F29 1.44 0 No No 0 4 0 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8U4O_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.8
Number of Linked Nodes 332
Number of Links 365
Number of Hubs 50
Number of Links mediated by Hubs 176
Number of Communities 12
Number of Nodes involved in Communities 58
Number of Links involved in Communities 72
Path Summary
Number Of Nodes in MetaPath 90
Number Of Links MetaPath 89
Number of Shortest Paths 89583
Length Of Smallest Path 3
Average Path Length 16.1178
Length of Longest Path 41
Minimum Path Strength 1.185
Average Path Strength 5.64932
Maximum Path Strength 17.575
Minimum Path Correlation 0.7
Average Path Correlation 0.952089
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 60.8287
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.9141
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• molecular transducer activity   • coreceptor activity   • signaling receptor activity   • cytoskeletal protein binding   • myosin light chain binding   • protein binding   • binding   • myosin binding   • C-C chemokine binding   • chemokine binding   • cytokine binding   • G protein-coupled chemoattractant receptor activity   • C-X-C motif chemokine 12 receptor activity   • C-X-C chemokine receptor activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • ubiquitin protein ligase binding   • ubiquitin-like protein ligase binding   • enzyme binding   • virus receptor activity   • exogenous protein binding   • C-C chemokine receptor activity   • ubiquitin binding   • ubiquitin-like protein binding   • actin binding   • bioluminescence   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • developmental process   • multicellular organism development   • multicellular organismal process   • head development   • central nervous system development   • anatomical structure development   • animal organ development   • brain development   • nervous system development   • system development
Gene OntologyBiological Process• bioluminescence   • metabolic process   • cellular process   • generation of precursor metabolites and energy   • developmental process   • multicellular organism development   • multicellular organismal process   • head development   • central nervous system development   • anatomical structure development   • animal organ development   • brain development   • nervous system development   • system development   • regulation of biological process   • cell adhesion   • regulation of cellular process   • regulation of cell adhesion   • biological regulation   • apoptotic process   • cell death   • programmed cell death   • membrane organization   • cellular component organization   • myelination   • myelin maintenance   • axon ensheathment   • ensheathment of neurons   • plasma membrane organization   • cellular component organization or biogenesis   • endomembrane system organization   • cell chemotaxis   • cellular response to stimulus   • chemotaxis   • dendritic cell chemotaxis   • response to stimulus   • response to external stimulus   • leukocyte migration   • dendritic cell migration   • cellular response to chemical stimulus   • taxis   • immune system process   • response to chemical   • mononuclear cell migration   • cell migration   • cell motility   • leukocyte chemotaxis   • locomotion   • response to decreased oxygen levels   • response to hypoxia   • response to stress   • response to oxygen levels   • response to abiotic stimulus   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • neurogenesis   • cellular developmental process   • cell differentiation   • regulation of response to external stimulus   • regulation of chemotaxis   • regulation of response to stimulus   • regulation of locomotion   • immune response   • cell surface receptor signaling pathway   • chemokine (C-X-C motif) ligand 12 signaling pathway   • signaling   • CXCL12-activated CXCR4 signaling pathway   • response to cytokine   • response to chemokine   • cytokine-mediated signaling pathway   • cellular response to chemokine   • chemokine-mediated signaling pathway   • cell communication   • response to peptide   • G protein-coupled receptor signaling pathway   • cellular response to cytokine stimulus   • signal transduction   • C-X-C chemokine receptor CXCR4 signaling pathway   • intracellular signal transduction   • calcium-mediated signaling   • intracellular signaling cassette   • regulation of multicellular organismal development   • regulation of developmental process   • positive regulation of biological process   • vasculature development   • regulation of vasculature development   • circulatory system development   • positive regulation of developmental process   • positive regulation of vasculature development   • positive regulation of multicellular organismal process   • regulation of multicellular organismal process   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • positive regulation of macrophage migration inhibitory factor signaling pathway   • positive regulation of response to cytokine stimulus   • positive regulation of response to stimulus   • macrophage migration inhibitory factor signaling pathway   • positive regulation of cellular process   • regulation of signaling   • regulation of macrophage migration inhibitory factor signaling pathway   • regulation of cytokine-mediated signaling pathway   • regulation of response to cytokine stimulus   • regulation of cell communication   • positive regulation of cytokine-mediated signaling pathway   • positive regulation of signaling   • homeostatic process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • regulation of metabolic process   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of cell migration   • positive regulation of cell motility   • regulation of cell migration   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to external biotic stimulus   • response to virus   • response to biotic stimulus   • defense response   • inflammatory response   • positive regulation of nervous system development   • cell development   • regulation of neurogenesis   • regulation of cell differentiation   • regulation of gliogenesis   • positive regulation of gliogenesis   • regulation of cell development   • regulation of nervous system development   • gliogenesis   • positive regulation of cell differentiation   • positive regulation of neurogenesis   • positive regulation of oligodendrocyte differentiation   • positive regulation of cell development   • regulation of glial cell differentiation   • positive regulation of glial cell differentiation   • oligodendrocyte differentiation   • glial cell differentiation   • regulation of oligodendrocyte differentiation   • cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space
Gene OntologyCellular Component• cell periphery   • cellular anatomical structure   • cell surface   • membrane   • plasma membrane   • external side of plasma membrane   • side of membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • cell leading edge   • intracellular anatomical structure   • cytoplasm   • anchoring junction   • cell junction   • intracellular organelle   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • lysosome   • protein-containing complex   • cytoplasmic vesicle   • intracellular vesicle   • early endosome   • endosome   • endomembrane system   • late endosome   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • Golgi apparatus   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular function activator activity   • signaling receptor regulator activity   • growth factor activity   • receptor ligand activity   • signaling receptor activator activity   • cytokine receptor binding   • chemokine receptor binding   • chemokine activity   • cytokine activity   • CXCR chemokine receptor binding   • cell adhesion molecule binding   • integrin binding   • response to peptide   • response to chemokine   • response to cytokine   • cellular response to cytokine stimulus   • cellular response to chemokine   • cellular component biogenesis   • cellular component assembly   • protein-containing complex organization   • protein-containing complex assembly   • integrin activation   • response to mechanical stimulus   • response to abiotic stimulus   • response to external stimulus   • response to ultrasound   • cell surface receptor signaling pathway   • chemokine (C-X-C motif) ligand 12 signaling pathway   • cytokine-mediated signaling pathway   • chemokine-mediated signaling pathway   • head development   • forebrain development   • brain development   • nervous system development   • telencephalon cell migration   • central nervous system development   • forebrain cell migration   • telencephalon development   • inorganic ion homeostasis   • intracellular calcium ion homeostasis   • homeostatic process   • calcium ion homeostasis   • cellular homeostasis   • chemical homeostasis   • intracellular monoatomic cation homeostasis   • monoatomic ion homeostasis   • intracellular chemical homeostasis   • monoatomic cation homeostasis   • intracellular monoatomic ion homeostasis   • defense response   • response to stress   • regulation of actin filament-based process   • regulation of cellular component size   • actin filament-based process   • actin polymerization or depolymerization   • regulation of actin filament organization   • actin cytoskeleton organization   • regulation of actin polymerization or depolymerization   • actin filament organization   • regulation of actin filament length   • regulation of actin cytoskeleton organization   • regulation of supramolecular fiber organization   • supramolecular fiber organization   • regulation of anatomical structure size   • chemotaxis   • taxis   • locomotion   • detection of external stimulus   • detection of stimulus involved in sensory perception of pain   • sensory perception of temperature stimulus   • sensory perception of pain   • detection of temperature stimulus involved in sensory perception   • response to temperature stimulus   • detection of abiotic stimulus   • detection of stimulus   • detection of temperature stimulus   • detection of stimulus involved in sensory perception   • detection of temperature stimulus involved in sensory perception of pain   • cell chemotaxis   • positive regulation of monocyte chemotaxis   • positive regulation of locomotion   • regulation of cell motility   • regulation of response to external stimulus   • positive regulation of chemotaxis   • positive regulation of cell migration   • regulation of monocyte chemotaxis   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of cell motility   • regulation of cell migration   • myeloid leukocyte migration   • positive regulation of mononuclear cell migration   • regulation of immune system process   • regulation of mononuclear cell migration   • positive regulation of immune system process   • regulation of leukocyte chemotaxis   • regulation of leukocyte migration   • positive regulation of leukocyte migration   • positive regulation of leukocyte chemotaxis   • regulation of chemotaxis   • monocyte chemotaxis   • regulation of response to stimulus   • regulation of locomotion   • leukocyte chemotaxis   • regulation of calcium ion import   • regulation of calcium ion transport   • positive regulation of calcium ion transport   • positive regulation of calcium ion import   • regulation of monoatomic ion transport   • calcium ion transport   • metal ion transport   • positive regulation of transport   • positive regulation of monoatomic ion transport   • monoatomic ion transport   • calcium ion import   • monoatomic cation transport   • regulation of metal ion transport   • regulation of lymphocyte migration   • positive regulation of lymphocyte migration   • positive regulation of T cell migration   • regulation of T cell migration   • cell adhesion   • response to decreased oxygen levels   • response to hypoxia   • response to oxygen levels   • negative regulation of intracellular signal transduction   • regulation of cellular response to stress   • regulation of signal transduction   • regulation of intrinsic apoptotic signaling pathway in response to DNA damage   • regulation of programmed cell death   • regulation of intrinsic apoptotic signaling pathway   • cellular response to stress   • regulation of intracellular signal transduction   • negative regulation of apoptotic signaling pathway   • regulation of response to stress   • intrinsic apoptotic signaling pathway in response to DNA damage   • intrinsic apoptotic signaling pathway   • negative regulation of response to stimulus   • negative regulation of programmed cell death   • regulation of apoptotic process   • cell death   • negative regulation of signal transduction   • negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage   • apoptotic signaling pathway   • negative regulation of intrinsic apoptotic signaling pathway   • negative regulation of apoptotic process   • DNA damage response   • apoptotic process   • programmed cell death   • regulation of apoptotic signaling pathway   • adult locomotory behavior   • behavior   • adult behavior   • locomotory behavior   • detection of mechanical stimulus involved in sensory perception of pain   • detection of mechanical stimulus involved in sensory perception   • sensory perception of mechanical stimulus   • detection of mechanical stimulus   • positive chemotaxis   • positive regulation of positive chemotaxis   • induction of positive chemotaxis   • regulation of positive chemotaxis   • immune response   • axon extension   • positive regulation of nervous system development   • regulation of growth   • axonogenesis   • developmental growth   • cell projection organization   • regulation of cell differentiation   • regulation of neurogenesis   • neuron projection development   • regulation of cell development   • positive regulation of axon extension involved in axon guidance   • positive regulation of developmental process   • cell projection morphogenesis   • neuron differentiation   • neuron projection morphogenesis   • cell differentiation   • positive regulation of cell projection organization   • positive regulation of developmental growth   • neuron projection extension involved in neuron projection guidance   • regulation of cell projection organization   • positive regulation of cell development   • developmental growth involved in morphogenesis   • generation of neurons   • positive regulation of multicellular organismal process   • regulation of neuron projection development   • positive regulation of cellular component organization   • cellular developmental process   • regulation of developmental process   • plasma membrane bounded cell projection morphogenesis   • cell development   • cell growth   • cell morphogenesis   • regulation of axon extension   • regulation of nervous system development   • neurogenesis   • regulation of axon extension involved in axon guidance   • regulation of extent of cell growth   • positive regulation of cell differentiation   • regulation of axonogenesis   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • axon extension involved in axon guidance   • positive regulation of axon extension   • positive regulation of axonogenesis   • regulation of anatomical structure morphogenesis   • regulation of cell size   • neuron projection extension   • regulation of multicellular organismal development   • regulation of developmental growth   • plasma membrane bounded cell projection organization   • developmental cell growth   • growth   • axon guidance   • positive regulation of cell growth   • axon development   • regulation of cell growth   • cell morphogenesis involved in neuron differentiation   • anatomical structure morphogenesis   • positive regulation of growth   • neuron projection guidance   • neuron development   • regulation of plasma membrane bounded cell projection organization   • CXCL12-activated CXCR4 signaling pathway   • C-X-C chemokine receptor CXCR4 signaling pathway   • negative regulation of locomotion   • regulation of leukocyte adhesion to vascular endothelial cell   • leukocyte cell-cell adhesion   • negative regulation of cell adhesion   • leukocyte tethering or rolling   • negative regulation of leukocyte tethering or rolling   • cell-cell adhesion   • negative regulation of cellular extravasation   • cellular extravasation   • regulation of cell-cell adhesion   • negative regulation of cell migration   • regulation of cell adhesion   • negative regulation of leukocyte adhesion to vascular endothelial cell   • regulation of leukocyte tethering or rolling   • negative regulation of leukocyte migration   • negative regulation of leukocyte cell-cell adhesion   • negative regulation of immune system process   • leukocyte adhesion to vascular endothelial cell   • negative regulation of cell-cell adhesion   • regulation of leukocyte cell-cell adhesion   • negative regulation of cell motility   • regulation of cellular extravasation   • monoamine transport   • regulation of catecholamine secretion   • organic hydroxy compound transport   • positive regulation of secretion by cell   • dopamine transport   • positive regulation of amine transport   • catecholamine transport   • positive regulation of secretion   • positive regulation of catecholamine secretion   • dopamine secretion   • positive regulation of dopamine secretion   • catecholamine secretion   • amine transport   • regulation of amine transport   • regulation of dopamine secretion   • vasculature development   • regulation of vasculature development   • circulatory system development   • positive regulation of vasculature development   • regulation of leukocyte apoptotic process   • dendritic cell apoptotic process   • negative regulation of dendritic cell apoptotic process   • leukocyte apoptotic process   • negative regulation of leukocyte apoptotic process   • regulation of dendritic cell apoptotic process   • positive regulation of cell adhesion   • positive regulation of neuron differentiation   • regulation of neuron differentiation   • biological process involved in interspecies interaction between organisms   • response to other organism   • response to external biotic stimulus   • response to virus   • response to biotic stimulus   • neuron migration   • animal organ regeneration   • regeneration   • positive regulation of cell population proliferation   • endothelial cell proliferation   • positive regulation of epithelial cell proliferation   • regulation of endothelial cell proliferation   • regulation of cell population proliferation   • positive regulation of endothelial cell proliferation   • regulation of epithelial cell proliferation   • epithelial cell proliferation   • circulatory system process   • blood circulation
SCOP2Domain Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines
SCOP2Family Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain   • Interleukin 8-like chemokines
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP61073
Sequence
>8U4O_nogp_Chain_R
MKEPCFREE NANFNKIFL PTIYSIIFL TGIVGNGLV ILVMGYQKK 
LRSMTDKYR LHLSVADLL FVITLPFWA VDAVANWYF GNFLCKAVH 
VIYTVSLYS SVLILAFIS LDRYLAIVH ATNSQRPRK LLAEKVVYV 
GVWIPALLL TIPDFIFAN VSEADDRYI CDRFYPNDL WVVVFQFQH 
IMVGLILPG IVILSCYCI IISKLSHSK GHQKRKALK TTVILILAF 
FACWLPYYI GISIDSFIL LEIIKQGCE FENTVHKWI SITEALAFF 
HCCLNPILY AFLGAKFKT SAQHALT


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8YU7AProteinChemokineCXCR4Homo sapiens---3.012025-03-05doi.org/10.1016/j.celrep.2025.115255
8U4NAProteinChemokineCXCR4Homo sapiens--Gi1/β1/γ22.722024-03-13doi.org/10.1101/2024.02.09.579708
8U4N (No Gprot) AProteinChemokineCXCR4Homo sapiens--2.722024-03-13doi.org/10.1101/2024.02.09.579708
8U4OAProteinChemokineCXCR4Homo sapiensCXCL12-Gi1/β1/γ23.292024-03-13doi.org/10.1101/2024.02.09.579708
8U4O (No Gprot) AProteinChemokineCXCR4Homo sapiensCXCL12-3.292024-03-13doi.org/10.1101/2024.02.09.579708
8U4PAProteinChemokineCXCR4Homo sapiensAMD3100-Gi1/β1/γ23.152024-03-13doi.org/10.1101/2024.02.09.579708
8U4P (No Gprot) AProteinChemokineCXCR4Homo sapiensAMD3100-3.152024-03-13doi.org/10.1101/2024.02.09.579708
8U4QAProteinChemokineCXCR4Homo sapiensREGN7663-Fab-Gi1/β1/γ23.362024-03-13doi.org/10.1101/2024.02.09.579708
8U4Q (No Gprot) AProteinChemokineCXCR4Homo sapiensREGN7663-Fab-3.362024-03-13doi.org/10.1101/2024.02.09.579708
8U4RAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.12024-03-13doi.org/10.1101/2024.02.09.579708
3ODUAProteinChemokineCXCR4Homo sapiensIT1t--2.52010-10-27doi.org/10.1126/science.1194396
3OE0AProteinChemokineCXCR4Homo sapiensCVX15--2.92010-10-27doi.org/10.1126/science.1194396
3OE6AProteinChemokineCXCR4Homo sapiensIT1t--3.22010-10-27doi.org/10.1126/science.1194396
3OE8AProteinChemokineCXCR4Homo sapiensIT1t--3.12010-10-27doi.org/10.1126/science.1194396
3OE9AProteinChemokineCXCR4Homo sapiensIT1t--3.12010-10-27doi.org/10.1126/science.1194396
4RWSAProteinChemokineCXCR4Homo sapiensvMIP-II--3.12015-02-11doi.org/10.1126/science.1261064
8K3ZAProteinChemokineCXCR4Homo sapiensCXCL12-Gi1/β1/γ12.812024-07-17doi.org/10.1016/j.celrep.2024.114578
8K3Z (No Gprot) AProteinChemokineCXCR4Homo sapiensCXCL12-2.812024-07-17doi.org/10.1016/j.celrep.2024.114578
8U4SAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.352024-03-13doi.org/10.1038/s41594-024-01397-1
8U4TAProteinChemokineCXCR4Homo sapiensREGN7663-Fab--3.382024-03-13doi.org/10.1038/s41594-024-01397-1
8ZPLAProteinChemokineCXCR4Homo sapiensHF51116--3.012025-02-26doi.org/10.1073/pnas.2425795122
8ZPMAProteinChemokineCXCR4Homo sapiensAMD070--3.22025-02-26doi.org/10.1073/pnas.2425795122
8ZPNAProteinChemokineCXCR4Homo sapiensAMD3100--3.312025-02-26doi.org/10.1073/pnas.2425795122




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