Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:F5 4.07429720
2L:L:L6 6620
3R:R:F38 5.79624
4R:R:F54 5.8225437
5R:R:I58 6.135436
6R:R:N61 6.61409
7R:R:Y81 6.91508
8R:R:F93 4.6475836
9R:R:M96 7.405407
10R:R:W109 8.08577
11R:R:F111 5.676506
12R:R:D113 6.3404
13R:R:F119 6.356504
14R:R:Q120 6.435404
15R:R:F121 8.485486
16R:R:E124 10.435414
17R:R:C126 2.9125408
18R:R:Y128 10.8975416
19R:R:E140 6.9925409
20R:R:Y142 9.1225408
21R:R:K157 2.4075403
22R:R:W168 6.6125409
23R:R:T190 3.3125443
24R:R:D191 6.83446
25R:R:L209 3.9375404
26R:R:F220 7.195416
27R:R:Y232 6.29667609
28R:R:W276 5.98571718
29R:R:G282 2.72404
30R:R:R283 11.27416
31R:R:F286 6.55424
32R:R:F290 6.16167621
33R:R:Q302 5.5475423
34R:R:Y313 8.6225407
35R:R:L322 3.29408
36R:R:Y323 5.296509
37R:R:Y330 8.33468
38L:L:?1 10.3067610
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:F5 R:R:F309 50.08965.36YesNo005
2R:R:F309 R:R:Y313 50.61579.28NoYes057
3R:R:F93 R:R:Y313 99.55576.19YesYes067
4R:R:F93 R:R:I92 65.44043.77YesNo067
5R:R:C126 R:R:I92 30.50664.91YesNo087
6R:R:F312 R:R:I92 52.4636.28NoNo077
7R:R:F312 R:R:W276 51.63294.01NoYes178
8R:R:F279 R:R:W276 51.32114.01NoYes168
9R:R:F279 R:R:R283 86.788812.83NoYes166
10L:L:?1 R:R:R283 22.591613.87YesYes106
11L:L:?1 L:L:S4 27.646112.86YesNo000
12L:L:F5 R:R:Q302 30.17153.51YesYes203
13L:L:L6 R:R:Q302 25.85745.32YesYes203
14L:L:L6 R:R:F286 14.37264.87YesYes204
15L:L:S4 R:R:F286 26.808310.57NoYes004
16L:L:F5 R:R:F38 18.75293.22YesYes204
17L:L:F5 R:R:R102 21.88626.41YesNo005
18L:L:F5 R:R:N305 12.52923.62YesNo004
19L:L:H10 L:L:L6 10.327411.57NoYes200
20L:L:L6 R:R:S289 13.86989.01YesNo202
21L:L:P8 R:R:L37 11.632913.14NoNo005
22L:L:H10 L:L:Q14 12.09669.89NoNo000
23L:L:F5 R:R:L103 11.71472.44YesNo204
24R:R:L103 R:R:L43 11.53552.77NoNo045
25R:R:F93 R:R:N61 97.77863.62YesYes069
26R:R:A86 R:R:N61 51.26274.69NoYes099
27R:R:A86 R:R:T64 50.2263.36NoNo099
28R:R:N324 R:R:T64 41.64467.31NoNo679
29R:R:L82 R:R:N324 42.01095.49NoNo087
30R:R:L82 R:R:Y323 40.9867.03NoYes089
31R:R:V268 R:R:Y323 83.2973.79NoYes089
32R:R:L322 R:R:V268 79.41934.47YesNo088
33R:R:I318 R:R:L322 17.00314.28NoYes078
34R:R:I318 R:R:L314 12.76317.14NoNo075
35R:R:D89 R:R:N61 45.16376.73NoYes099
36R:R:D89 R:R:N319 87.57218.08NoNo099
37R:R:M85 R:R:N319 85.27285.61NoNo099
38R:R:I134 R:R:M85 80.80674.37NoNo089
39R:R:I134 R:R:Y323 78.60093.63NoYes089
40R:R:A316 R:R:F93 45.84185.55NoYes096
41R:R:A316 R:R:D89 44.8094.63NoNo099
42R:R:E124 R:R:R283 32.595510.47YesYes146
43R:R:E124 R:R:Y128 72.969615.71YesYes146
44R:R:F220 R:R:Y128 10011.35YesYes166
45R:R:F220 R:R:L132 95.561210.96YesNo066
46R:R:I167 R:R:L132 90.93149.99NoNo076
47R:R:I167 R:R:V163 88.60483.07NoNo076
48R:R:V163 R:R:Y81 86.25887.57NoYes068
49R:R:E140 R:R:Y81 44.58696.73YesYes098
50R:R:E140 R:R:T77 20.01179.88YesNo097
51R:R:T76 R:R:T77 35.07793.14NoNo077
52R:R:N79 R:R:T76 45.05465.85NoNo087
53R:R:R283 R:R:S217 32.9157.91YesNo066
54R:R:S217 R:R:Y128 31.76937.63NoYes066
55R:R:V160 R:R:Y81 34.855812.62NoYes078
56R:R:T77 R:R:V160 20.15593.17NoNo077
57R:R:E140 R:R:T78 19.99224.23YesNo098
58R:R:T76 R:R:T78 17.50976.28NoNo078
59R:R:L74 R:R:N79 30.06634.12NoNo088
60R:R:A333 R:R:L74 15.04684.73NoNo068
61R:R:C126 R:R:S88 18.09823.44YesNo088
62R:R:S88 R:R:W168 15.12863.71NoYes089
63R:R:D99 R:R:Y313 50.12083.45NoYes067
64R:R:D99 R:R:F119 49.66874.78NoYes064
65R:R:F119 R:R:W109 28.43344.01YesYes047
66R:R:F119 R:R:Q120 47.06943.51YesYes044
67R:R:V184 R:R:W109 18.61653.68NoYes057
68R:R:V131 R:R:W276 10.09743.68NoYes188
69R:R:R141 R:R:Y323 50.10526.17NoYes099
70R:R:R141 R:R:Y232 49.06474.12NoYes099
71R:R:I235 R:R:Y232 46.05222.42NoYes089
72R:R:I235 R:R:Y142 36.593.63NoYes088
73R:R:C146 R:R:Y142 12.38899.41NoYes078
74R:R:L231 R:R:Y142 14.844115.24NoYes078
75R:R:L231 R:R:V139 12.38892.98NoNo077
76L:L:?1 R:R:M213 22.72025.38YesNo005
77R:R:L181 R:R:M213 13.6364.24NoNo045
78R:R:L181 R:R:L209 10.97044.15NoYes044
79R:R:N196 R:R:V184 16.13025.91NoNo045
80R:R:N196 R:R:P192 14.55183.26NoNo041
81R:R:D191 R:R:P192 11.37188.05YesNo061
82R:R:F221 R:R:H280 39.35716.97NoNo087
83R:R:F221 R:R:F222 33.65164.29NoNo084
84R:R:F222 R:R:F226 31.79665.36NoNo043
85R:R:F226 R:R:V225 30.90022.62NoNo036
86R:R:T229 R:R:V225 29.12311.59NoNo056
87R:R:T229 R:R:V269 27.37331.59NoNo058
88R:R:L322 R:R:M264 54.55182.83YesNo088
89R:R:M264 R:R:M326 46.208111.55NoNo087
90R:R:M326 R:R:Q260 33.63214.08NoNo077
91R:R:K263 R:R:Q260 29.42715.42NoNo077
92R:R:K259 R:R:K263 25.210411.49NoNo057
93R:R:K259 R:R:W240 16.75378.12NoNo054
94R:R:V262 R:R:W240 12.76312.45NoNo074
95R:R:I297 R:R:S289 16.82773.1NoNo012
96R:R:L80 R:R:V160 12.73192.98NoNo057
97R:R:L80 R:R:S83 10.20651.5NoNo056
98R:R:Q120 R:R:R102 21.593.5YesNo045
99L:L:?1 R:R:Q120 59.24410.13YesYes004
100L:L:?1 R:R:E124 41.995310.09YesYes104
101R:R:F279 R:R:H280 35.37415.66NoNo167
102R:R:V269 R:R:Y232 27.07725.05NoYes089
103R:R:F286 R:R:F290 12.56046.43YesYes241
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:G2 R:R:S123 3.71 0 No No 0 6 0 1
L:L:S4 R:R:F286 10.57 0 No Yes 0 4 0 1
L:L:F5 R:R:F38 3.22 2 Yes Yes 0 4 0 1
L:L:F5 R:R:R102 6.41 2 Yes No 0 5 0 1
L:L:F5 R:R:Q302 3.51 2 Yes Yes 0 3 0 1
L:L:F5 R:R:N305 3.62 2 Yes No 0 4 0 1
L:L:F5 R:R:F309 5.36 2 Yes No 0 5 0 1
L:L:L6 R:R:F286 4.87 2 Yes Yes 0 4 0 1
L:L:L6 R:R:S289 9.01 2 Yes No 0 2 0 1
L:L:L6 R:R:F290 3.65 2 Yes Yes 0 1 0 1
L:L:L6 R:R:Q302 5.32 2 Yes Yes 0 3 0 1
L:L:S7 R:R:Y106 8.9 5 No No 0 3 0 1
L:L:S7 R:R:E197 4.31 5 No No 0 4 0 1
L:L:P8 R:R:Q36 6.32 0 No No 0 5 0 1
L:L:P8 R:R:L37 13.14 0 No No 0 5 0 1
L:L:P8 R:R:Y106 9.74 0 No No 0 3 0 1
L:L:H10 R:R:F290 7.92 2 No Yes 0 1 0 1
L:L:Q11 R:R:Q299 3.84 0 No No 0 1 0 1
R:R:F38 R:R:L37 4.87 2 Yes No 4 5 1 1
R:R:L37 R:R:Q302 3.99 2 No Yes 5 3 1 1
R:R:F38 R:R:Q302 9.37 2 Yes Yes 4 3 1 1
R:R:F38 R:R:L306 13.4 2 Yes No 4 4 1 2
R:R:Q120 R:R:R102 3.5 0 Yes No 4 5 1 1
R:R:E197 R:R:Y106 15.71 5 No No 4 3 1 1
R:R:F119 R:R:Q120 3.51 0 Yes Yes 4 4 2 1
R:R:Q120 R:R:V182 8.6 0 Yes No 4 4 1 2
L:L:?1 R:R:Q120 10.13 1 Yes Yes 0 4 0 1
R:R:E124 R:R:Y128 15.71 1 Yes Yes 4 6 1 2
R:R:E124 R:R:I178 5.47 1 Yes No 4 4 1 1
R:R:E124 R:R:R283 10.47 1 Yes Yes 4 6 1 1
L:L:?1 R:R:E124 10.09 1 Yes Yes 0 4 0 1
R:R:S217 R:R:Y128 7.63 0 No Yes 6 6 2 2
L:L:?1 R:R:I178 9.51 1 Yes No 0 4 0 1
R:R:L181 R:R:M213 4.24 0 No No 4 5 2 1
R:R:E197 R:R:R199 5.82 5 No No 4 3 1 2
R:R:F290 R:R:R199 3.21 2 Yes No 1 3 1 2
R:R:F286 R:R:P200 4.33 2 Yes No 4 4 1 2
R:R:F290 R:R:V205 11.8 2 Yes No 1 4 1 2
L:L:?1 R:R:M213 5.38 1 Yes No 0 5 0 1
R:R:R283 R:R:S217 7.91 1 Yes No 6 6 1 2
R:R:F279 R:R:R283 12.83 1 No Yes 6 6 2 1
L:L:?1 R:R:R283 13.87 1 Yes Yes 0 6 0 1
R:R:F286 R:R:F290 6.43 2 Yes Yes 4 1 1 1
R:R:F290 R:R:S289 3.96 2 Yes No 1 2 1 1
R:R:I297 R:R:S289 3.1 0 No No 1 2 2 1
R:R:A298 R:R:Q299 4.55 0 No No 3 1 1 1
R:R:F309 R:R:Y313 9.28 0 No Yes 5 7 1 2
R:R:M213 R:R:S287 3.07 0 No No 5 4 1 2
R:R:N305 R:R:S308 2.98 0 No No 4 7 1 2
R:R:L103 R:R:L43 2.77 2 No No 4 5 1 2
L:L:F5 R:R:L103 2.44 2 Yes No 0 4 0 1
R:R:F38 R:R:L103 2.44 2 Yes No 4 4 1 1
R:R:Q299 R:R:Y303 2.25 0 No No 1 1 1 2
R:R:C95 R:R:S123 1.72 0 No No 6 6 2 1
R:R:G282 R:R:N305 1.7 0 Yes No 4 4 2 1
L:L:L6 R:R:A298 1.58 2 Yes No 0 3 0 1
R:R:F38 R:R:P39 1.44 2 Yes No 4 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7F9Y_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.1
Number of Linked Nodes 282
Number of Links 313
Number of Hubs 38
Number of Links mediated by Hubs 152
Number of Communities 8
Number of Nodes involved in Communities 46
Number of Links involved in Communities 59
Path Summary
Number Of Nodes in MetaPath 104
Number Of Links MetaPath 103
Number of Shortest Paths 77857
Length Of Smallest Path 3
Average Path Length 16.2821
Length of Longest Path 36
Minimum Path Strength 1.41
Average Path Strength 6.23242
Maximum Path Strength 16.81
Minimum Path Correlation 0.7
Average Path Correlation 0.927678
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 45.0364
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.9762
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • G protein-coupled receptor-like
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeOCA
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeOCA
NameCaprylic acid
Synonymsn-octylic acid
Identifier
FormulaC8 H16 O2
Molecular Weight144.211
SMILES
PubChem379
Formal Charge0
Total Atoms26
Total Chiral Atoms0
Total Bonds25
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ92847
Sequence
>7F9Y_nogp_Chain_R
LQLFPAPLL AGVTATCVA LFVVGIAGN LLTMLVVSR FRELRTTTN 
LYLSSMAFS DLLIFLCMP LDLVRLWQY RPWNFGDLL CKLFQFVSE 
SCTYATVLT ITALSVERY FAICFPLRA KVVVTKGRV KLVIFVIWA 
VAFCSAGPI FVLVGVEHE NGTDPWDTN ECRPTEFAV RSGLLTVMV 
WVSSIFFFL PVFCLTVLY SLIGRKLWR NHKQTVKML AVVVFAFIL 
CWLPFHVGR YLFSKSFEP GSLEIAQIS QYCNLVSFV LFYLSAAIN 
PILYNIMSK KYRVAV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JSRAPeptideGhrelinGhrelinHomo sapiensAnamorelin-chim(NtGi1-Gs-CtGq)/β1/γ22.92025-01-22doi.org/10.1038/s41594-024-01481-6
8JSR (No Gprot) APeptideGhrelinGhrelinHomo sapiensAnamorelin-2.92025-01-22doi.org/10.1038/s41594-024-01481-6
7F83APeptideGhrelinGhrelinHomo sapiensPF-05190457--2.942022-01-1910.1038/s41467-022-27975-9
7W2ZAPeptideGhrelinGhrelinHomo sapiensGhrelin-Go/β1/γ22.82022-01-1910.1038/s41467-022-27975-9
7W2Z (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-2.82022-01-1910.1038/s41467-022-27975-9
7NA8APeptideGhrelinGhrelinHomo sapiensPubChem 178024-Gi1/β1/γ22.72021-12-1510.1038/s41467-021-26735-5
7NA8 (No Gprot) APeptideGhrelinGhrelinHomo sapiensPubChem 178024-2.72021-12-1510.1038/s41467-021-26735-5
7NA7APeptideGhrelinGhrelinHomo sapiensGhrelin-27-Gi1/β1/γ22.72021-12-1510.1038/s41467-021-26735-5
7NA7 (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-27-2.72021-12-1510.1038/s41467-021-26735-5
7F9ZAPeptideGhrelinGhrelinHomo sapiensGHRP-6-chim(NtGi1-Gs-CtGq)/β1/γ23.22021-08-1810.1038/s41467-021-25364-2
7F9Z (No Gprot) APeptideGhrelinGhrelinHomo sapiensGHRP-6-3.22021-08-1810.1038/s41467-021-25364-2
7F9YAPeptideGhrelinGhrelinHomo sapiensGhrelin-28-chim(NtGi1-Gs-CtGq)/β1/γ22.92021-08-1810.1038/s41467-021-25364-2
7F9Y (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-28-2.92021-08-1810.1038/s41467-021-25364-2
6KO5APeptideGhrelinGhrelinHomo sapiensPubChem 57400002--3.32020-08-1210.1038/s41467-020-17554-1




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Download 7F9Y_nogp.zip



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