Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.491210
2R:R:F54 6.7425427
3R:R:I58 3.436526
4R:R:T77 7.08407
5R:R:Y81 7.03508
6R:R:M85 5.5325419
7R:R:D89 6.6425409
8R:R:F93 4.8426
9R:R:R102 5.19515
10R:R:W109 7.575417
11R:R:Q120 7.44514
12R:R:F121 8.0925446
13R:R:E124 9.7025414
14R:R:Y128 13.275416
15R:R:I134 5.034518
16R:R:Y142 8.356508
17R:R:W168 6.345409
18R:R:F220 9.9375416
19R:R:F221 7.435408
20R:R:P224 4.465419
21R:R:L231 6.6375407
22R:R:Y232 7.03509
23R:R:F272 8.1925419
24R:R:W276 8.05333618
25R:R:F279 9.222516
26R:R:R283 12.1325416
27R:R:L285 4.164504
28R:R:F286 6.1325404
29R:R:F309 8.05333615
30R:R:F312 7.50167617
31R:R:Y313 12.7075417
32R:R:N319 5.2525419
33R:R:Y330 8.0675438
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:F309 38.91667.63YesYes105
2R:R:F309 R:R:L100 31.82863.65YesNo057
3R:R:L100 R:R:T47 29.65897.37NoNo076
4L:L:?1 R:R:F279 59.03024.45YesYes106
5R:R:F279 R:R:W276 69.369110.02YesYes168
6R:R:F272 R:R:W276 10018.04YesYes198
7R:R:F272 R:R:I134 98.15795.02YesYes198
8R:R:I134 R:R:L228 48.8154.28YesNo088
9R:R:L228 R:R:S138 48.01054.5NoNo089
10R:R:S138 R:R:Y232 23.60126.36NoYes099
11R:R:V268 R:R:Y232 29.29853.79NoYes089
12R:R:L322 R:R:V268 26.90312.98NoNo088
13R:R:I318 R:R:L322 12.61064.28NoNo078
14L:L:?1 R:R:F312 49.66695.72YesYes107
15R:R:F312 R:R:W276 60.91594.01YesYes178
16R:R:I134 R:R:Y323 67.78917.25YesNo089
17R:R:R141 R:R:Y323 25.6186.17NoNo099
18R:R:R141 R:R:Y232 24.94458.23NoYes099
19R:R:F279 R:R:H280 30.467111.31YesNo067
20R:R:F221 R:R:H280 28.89079.05YesNo087
21R:R:F221 R:R:V225 17.83837.87YesNo086
22R:R:T229 R:R:V225 17.16121.59NoNo056
23R:R:T229 R:R:V269 17.17571.59NoNo058
24R:R:V269 R:R:Y232 17.30315.05NoYes089
25R:R:M96 R:R:Y313 13.633616.76NoYes077
26R:R:F54 R:R:M96 12.253812.44YesNo077
27R:R:F309 R:R:Y313 17.809212.38YesYes157
28R:R:F312 R:R:Y313 18.99611.35YesYes177
29R:R:S315 R:R:W276 24.35848.65NoYes198
30R:R:N319 R:R:S315 24.5044.47YesNo199
31R:R:D89 R:R:N319 22.54548.08YesYes099
32R:R:D89 R:R:N61 10.63028.08YesNo099
33R:R:L82 R:R:Y323 65.55035.86NoNo089
34R:R:L82 R:R:N324 18.06046.87NoNo087
35R:R:N324 R:R:Y330 14.838520.93NoYes378
36L:L:?1 R:R:Q120 29.54247.64YesYes104
37R:R:F119 R:R:Q120 13.469710.54NoYes044
38R:R:C95 R:R:F119 10.26255.59NoNo064
39R:R:L137 R:R:L82 48.64035.54NoNo088
40R:R:L137 R:R:Y81 47.18418.21NoYes088
41R:R:E140 R:R:Y81 24.80988.98NoYes098
42R:R:E140 R:R:T78 11.45665.64NoNo098
43R:R:S327 R:R:Y330 11.61672.54NoYes088
44R:R:E140 R:R:T77 12.53059.88NoYes097
45R:R:V160 R:R:Y81 15.48656.31NoYes078
46R:R:T77 R:R:V160 12.58877.93YesNo077
47R:R:K157 R:R:T77 19.10529.01NoYes037
48L:L:?1 R:R:R102 36.073410.15YesYes105
49R:R:R102 R:R:W109 18.95234YesYes157
50R:R:C116 R:R:W109 12.93095.22NoYes197
51R:R:C116 R:R:K117 22.51996.47NoNo097
52R:R:F179 R:R:K117 12.80724.96NoNo057
53R:R:F121 R:R:F179 11.685915YesNo065
54R:R:F172 R:R:W168 10.26254.01NoYes049
55R:R:S84 R:R:W168 12.63616.18NoYes099
56R:R:C198 R:R:Q120 14.10684.58NoYes194
57R:R:C116 R:R:C198 12.61425.46NoNo199
58R:R:I134 R:R:M85 18.12224.37YesYes189
59R:R:M85 R:R:T130 22.46176.02YesNo099
60R:R:S88 R:R:T130 28.07894.8NoNo089
61R:R:S88 R:R:W168 25.11927.41NoYes089
62R:R:L43 R:R:T47 24.78791.47NoNo056
63R:R:L43 R:R:W104 22.34151.14NoNo054
64R:R:R107 R:R:W104 17.42697NoNo044
65R:R:E197 R:R:R102 16.88814.65NoYes045
66R:R:P108 R:R:R107 14.95871.44NoNo044
67R:R:D113 R:R:K117 10.34989.68NoNo047
68L:L:?1 R:R:E124 14.16516.92YesYes104
69R:R:E124 R:R:Y128 14.379814.59YesYes146
70R:R:F220 R:R:Y128 16.342125.79YesYes166
71R:R:L231 R:R:S138 45.38214.5YesNo079
72R:R:L231 R:R:Y142 34.733717.58YesYes078
73R:R:I235 R:R:Y142 19.48013.63NoYes088
74R:R:G158 R:R:K157 16.14183.49NoNo043
75R:R:G158 R:R:T156 12.92731.82NoNo047
76R:R:E197 R:R:R199 13.74284.65NoNo043
77R:R:E185 R:R:R199 12.04999.3NoNo013
78R:R:E185 R:R:T201 10.34984.23NoNo013
79R:R:N196 R:R:P108 10.00041.63NoNo044
80L:L:?1 R:R:L210 16.62974.34YesNo003
81R:R:L210 R:R:S287 13.78654.5NoNo034
82R:R:S287 R:R:T211 12.02454.8NoNo044
83R:R:T211 R:R:W215 10.36086.06NoNo044
84R:R:F221 R:R:L277 26.71748.53YesNo086
85R:R:L322 R:R:V267 12.30111.49NoNo086
86R:R:L277 R:R:V281 18.86852.98NoNo067
87R:R:L285 R:R:V281 17.72912.98YesNo047
88R:R:I297 R:R:L285 14.28164.28NoYes014
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:D99 7.79 1 Yes No 0 6 0 1
L:L:?1 R:R:R102 10.15 1 Yes Yes 0 5 0 1
L:L:?1 R:R:Q120 7.64 1 Yes Yes 0 4 0 1
L:L:?1 R:R:S123 6.27 1 Yes No 0 6 0 1
L:L:?1 R:R:E124 6.92 1 Yes Yes 0 4 0 1
L:L:?1 R:R:L210 4.34 1 Yes No 0 3 0 1
L:L:?1 R:R:F279 4.45 1 Yes Yes 0 6 0 1
L:L:?1 R:R:R283 18.39 1 Yes Yes 0 6 0 1
L:L:?1 R:R:F286 7.63 1 Yes Yes 0 4 0 1
L:L:?1 R:R:F309 7.63 1 Yes Yes 0 5 0 1
L:L:?1 R:R:F312 5.72 1 Yes Yes 0 7 0 1
R:R:C50 R:R:F309 4.19 0 No Yes 6 5 2 1
R:R:F312 R:R:I92 6.28 1 Yes No 7 7 1 2
R:R:D99 R:R:F309 11.94 1 No Yes 6 5 1 1
R:R:D99 R:R:Y313 10.34 1 No Yes 6 7 1 2
R:R:R102 R:R:W109 4 1 Yes Yes 5 7 1 2
R:R:Q120 R:R:R102 5.84 1 Yes Yes 4 5 1 1
R:R:E197 R:R:R102 4.65 0 No Yes 4 5 2 1
R:R:F309 R:R:L103 8.53 1 Yes No 5 4 1 2
R:R:C198 R:R:W109 13.06 1 No Yes 9 7 2 2
R:R:F119 R:R:Q120 10.54 0 No Yes 4 4 2 1
R:R:Q120 R:R:V182 8.6 1 Yes No 4 4 1 2
R:R:C198 R:R:Q120 4.58 1 No Yes 9 4 2 1
R:R:E124 R:R:Y128 14.59 1 Yes Yes 4 6 1 2
R:R:E124 R:R:I178 6.83 1 Yes No 4 4 1 2
R:R:E124 R:R:R283 10.47 1 Yes Yes 4 6 1 1
R:R:F312 R:R:T127 9.08 1 Yes No 7 7 1 2
R:R:S217 R:R:Y128 5.09 0 No Yes 6 6 2 2
R:R:L181 R:R:M213 5.65 0 No No 4 5 2 1
R:R:L210 R:R:P200 4.93 0 No No 3 4 1 2
R:R:F286 R:R:P200 5.78 0 Yes No 4 4 1 2
R:R:L210 R:R:S287 4.5 0 No No 3 4 1 2
R:R:H280 R:R:S217 5.58 0 No No 7 6 2 2
R:R:R283 R:R:S217 7.91 1 Yes No 6 6 1 2
R:R:F279 R:R:W276 10.02 1 Yes Yes 6 8 1 2
R:R:F312 R:R:W276 4.01 1 Yes Yes 7 8 1 2
R:R:F279 R:R:H280 11.31 1 Yes No 6 7 1 2
R:R:F279 R:R:R283 11.76 1 Yes Yes 6 6 1 1
R:R:F279 R:R:F312 8.57 1 Yes Yes 6 7 1 1
R:R:F286 R:R:F290 7.5 0 Yes No 4 1 1 2
R:R:F309 R:R:Y313 12.38 1 Yes Yes 5 7 1 2
R:R:F312 R:R:Y313 11.35 1 Yes Yes 7 7 1 2
R:R:F309 R:R:L100 3.65 1 Yes No 5 7 1 2
R:R:F286 R:R:N305 3.62 0 Yes No 4 4 1 2
L:L:?1 R:R:M213 2.95 1 Yes No 0 5 0 1
R:R:M213 R:R:V212 1.52 0 No No 5 6 1 2
R:R:R102 R:R:V101 1.31 1 Yes No 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9V2N_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.68
Number of Linked Nodes 259
Number of Links 284
Number of Hubs 33
Number of Links mediated by Hubs 125
Number of Communities 4
Number of Nodes involved in Communities 34
Number of Links involved in Communities 49
Path Summary
Number Of Nodes in MetaPath 89
Number Of Links MetaPath 88
Number of Shortest Paths 67559
Length Of Smallest Path 3
Average Path Length 12.9535
Length of Longest Path 28
Minimum Path Strength 1.285
Average Path Strength 6.69003
Maximum Path Strength 21.345
Minimum Path Correlation 0.7
Average Path Correlation 0.915401
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 44.4644
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.5693
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeA1E
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeA1E
Name(R)-tacrine(10)-hupyridone
Synonyms(R)-N-9 -(1 ,2 ,3 ,4 -TETRAHYDROACRIDINYL)-N'-5 -[5 ,6 ,7 ,8 -TETRAHYDRO-2'(1'H)-QUINOLINONYL]-1,10-DIAMINODECANE; (R)-TACRINE(10)-HUPYRIDONE
Identifier
FormulaC32 H44 N4 O
Molecular Weight500.718
SMILES
PubChem5287575
Formal Charge0
Total Atoms81
Total Chiral Atoms1
Total Bonds85
Total Aromatic Bonds17

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ92847
Sequence
>9V2N_nogp_Chain_R
APLLAGVTA TCVALFVVG IAGNLLTML VVSRFRELR TTTNLYLSS 
MAFSDLLIF LCMPLDLVR LWQYRPWNF GDLLCKLFQ FVSESCTYA 
TVLTITALS VERYFAICF PLRAKVVVT KGRVKLVIF VIWAVAFCS 
AGPIFVLVG VEHDTNECR PTEFAVRSG LLTVMVWVS SIFFFLPVF 
CLTVLYSLI GRKLWRNHK QTVKMLAVV VFAFILCWL PFHVGRYLF 
SKSFEPGSL EIAQISQYC NLVSFVLFY LSAAINPIL YNIMSKKYR 
VAV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6KO5APeptideGhrelinGhrelinHomo sapiensPubChem 57400002--3.32020-08-12doi.org/10.1038/s41467-020-17554-1
7F9YAPeptideGhrelinGhrelinHomo sapiensGhrelin-28-chim(NtGi1-Gs-CtGq)/β1/γ22.92021-08-18doi.org/10.1038/s41467-021-25364-2
7F9Y (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-28-2.92021-08-18doi.org/10.1038/s41467-021-25364-2
7F9ZAPeptideGhrelinGhrelinHomo sapiensGHRP-6-chim(NtGi1-Gs-CtGq)/β1/γ23.22021-08-18doi.org/10.1038/s41467-021-25364-2
7F9Z (No Gprot) APeptideGhrelinGhrelinHomo sapiensGHRP-6-3.22021-08-18doi.org/10.1038/s41467-021-25364-2
7NA7APeptideGhrelinGhrelinHomo sapiensGhrelin-27-Gi1/β1/γ22.72021-12-15doi.org/10.1038/s41467-021-26735-5
7NA7 (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-27-2.72021-12-15doi.org/10.1038/s41467-021-26735-5
7NA8APeptideGhrelinGhrelinHomo sapiensPubChem 178024-Gi1/β1/γ22.72021-12-15doi.org/10.1038/s41467-021-26735-5
7NA8 (No Gprot) APeptideGhrelinGhrelinHomo sapiensPubChem 178024-2.72021-12-15doi.org/10.1038/s41467-021-26735-5
7F83APeptideGhrelinGhrelinHomo sapiensPF-05190457--2.942022-01-19doi.org/10.1038/s41467-022-27975-9
7W2ZAPeptideGhrelinGhrelinHomo sapiensGhrelin-Go/β1/γ22.82022-01-19doi.org/10.1038/s41467-022-27975-9
7W2Z (No Gprot) APeptideGhrelinGhrelinHomo sapiensGhrelin-2.82022-01-19doi.org/10.1038/s41467-022-27975-9
8JSRAPeptideGhrelinGhrelinHomo sapiensAnamorelin-chim(NtGi1-Gs-CtGq)/β1/γ22.92025-01-22doi.org/10.1038/s41594-024-01481-6
8JSR (No Gprot) APeptideGhrelinGhrelinHomo sapiensAnamorelin-2.92025-01-22doi.org/10.1038/s41594-024-01481-6
9UY3APeptideGhrelinGhrelinHomo sapiensAnamorelin-chim(NtGi1-Gs-CtGq)/β1/γ22.522025-07-02doi.org/10.1038/s41401-025-01606-7
9UY3 (No Gprot) APeptideGhrelinGhrelinHomo sapiensAnamorelin-2.522025-07-02doi.org/10.1038/s41401-025-01606-7
9V2NAPeptideGhrelinGhrelinHomo sapiensMacimorelin-chim(NtGi1-Gs-CtGq)/β1/γ22.632025-07-02doi.org/10.1038/s41401-025-01606-7
9V2N (No Gprot) APeptideGhrelinGhrelinHomo sapiensMacimorelin-2.632025-07-02doi.org/10.1038/s41401-025-01606-7




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Download 9V2N_nogp.zip



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