Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:M45 4.135420
2R:R:P32 4.38667615
3R:R:Y35 6.058517
4R:R:F39 6.98416
5R:R:N46 5.9925409
6R:R:D75 4.995409
7R:R:F78 7.07406
8R:R:L82 5.5025417
9R:R:W85 4.9506
10R:R:Y90 5.5175413
11R:R:W95 5.41714768
12R:R:F97 9.035466
13R:R:Y107 3.07754105
14R:R:Y114 6.852546
15R:R:F118 2.86667645
16R:R:S124 4489
17R:R:Y128 4.81408
18R:R:M162 3.5254104
19R:R:R168 8.7455
20R:R:L173 6.51433
21R:R:Y182 5.1475434
22R:R:M183 5.518555
23R:R:E198 3.8675454
24R:R:T206 5.33475
25R:R:F210 8.005478
26R:R:Y221 4.525688
27R:R:R243 6.73406
28R:R:L253 4.6407
29R:R:F257 4.9775408
30R:R:W261 6.7509
31R:R:H265 9.35478
32R:R:K268 5.92575
33R:R:W279 9.41401
34R:R:L287 4.474524
35R:R:Y299 4.884517
36R:R:L308 3.34254118
37R:R:Y309 4.688509
38R:R:R317 8.1275498
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:P46 R:R:M288 95.02243.35NoNo204
2L:L:M45 L:L:P46 93.84676.71YesNo200
3L:L:M45 R:R:Y93 92.37432.39YesNo004
4R:R:K178 R:R:Y93 11.06132.39NoNo024
5R:R:K178 R:R:T176 10.2257.51NoNo023
6R:R:D92 R:R:Y93 84.547127.59NoNo064
7R:R:D92 R:R:Y88 83.96476.9NoNo065
8R:R:R91 R:R:Y88 83.37992.06NoNo035
9R:R:P96 R:R:R91 80.419315.85NoNo043
10R:R:P96 R:R:W95 77.61858.11NoYes648
11R:R:W85 R:R:W95 70.93412.81YesYes068
12L:L:F53 R:R:W85 10.549813.03NoYes006
13R:R:L287 R:R:M288 91.75284.24YesNo244
14R:R:L287 R:R:V267 99.37732.98YesNo044
15R:R:F291 R:R:V267 49.9313.93NoNo044
16R:R:F291 R:R:Y264 50.02265.16NoNo046
17R:R:K268 R:R:Y264 1007.17YesNo056
18R:R:C294 R:R:V267 49.90173.42NoNo064
19R:R:C294 R:R:Y264 50.0256.72NoNo066
20R:R:L82 R:R:W85 58.61282.28YesYes076
21R:R:F39 R:R:L82 45.97913.4YesYes167
22R:R:F39 R:R:Y35 15.73493.09YesYes167
23R:R:L82 R:R:Y299 11.31164.69YesYes177
24R:R:F39 R:R:V79 32.27565.24YesNo066
25R:R:D75 R:R:V79 31.53822.92YesNo096
26R:R:D75 R:R:N46 28.54339.42YesYes099
27R:R:G47 R:R:N46 12.27373.39NoYes039
28R:R:L76 R:R:N46 14.72778.24NoYes079
29R:R:G47 R:R:L50 11.47283.42NoNo037
30R:R:L50 R:R:L76 11.5244.15NoNo077
31R:R:F54 R:R:L50 21.3623.65NoNo037
32R:R:F54 R:R:V53 19.73343.93NoNo036
33R:R:R317 R:R:V53 18.10226.54YesNo086
34R:R:K268 R:R:T206 31.33556.01YesYes755
35R:R:F210 R:R:T206 30.68362.59YesYes785
36R:R:F210 R:R:W261 58.03176.01YesYes089
37R:R:F257 R:R:W261 82.60959.02YesYes089
38R:R:F257 R:R:M217 56.75223.73YesNo088
39R:R:M217 R:R:S124 52.46323.07NoYes089
40R:R:H265 R:R:K268 59.787310.48YesYes785
41R:R:F210 R:R:H265 30.765414.71YesYes788
42R:R:H265 R:R:M113 29.32592.63YesNo087
43R:R:M113 R:R:W261 31.62122.33NoYes079
44R:R:F257 R:R:L120 19.47096.09YesNo088
45R:R:L120 R:R:Y309 18.26464.69NoYes089
46R:R:F78 R:R:N112 14.54712.08YesNo068
47R:R:N112 R:R:V111 11.33112.96NoNo084
48R:R:C220 R:R:S124 27.10155.16NoYes869
49R:R:S124 R:R:Y221 17.10353.82YesYes898
50R:R:C220 R:R:Y128 26.85125.38NoYes068
51R:R:V132 R:R:Y128 12.95252.52NoYes078
52R:R:I250 R:R:Y221 15.22584.84NoYes078
53R:R:I250 R:R:L246 14.0112.85NoNo077
54R:R:I228 R:R:L246 11.5245.71NoNo087
55R:R:F232 R:R:I228 10.31173.77NoNo048
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:C44 R:R:Y271 2.69 0 No No 0 4 0 1
L:L:M45 R:R:Y93 2.39 2 Yes No 0 4 0 1
L:L:P46 R:R:M288 3.35 2 No No 0 4 0 1
L:L:L47 R:R:Y185 5.86 0 No No 0 5 0 1
L:L:H48 R:R:R168 19.18 5 No Yes 0 5 0 1
L:L:H48 R:R:M183 9.19 5 No Yes 0 5 0 1
L:L:S49 R:R:L173 3 3 No Yes 0 3 0 1
L:L:S49 R:R:Q180 5.78 3 No No 0 2 0 1
L:L:V51 R:R:W85 3.68 0 No Yes 0 6 0 1
L:L:P52 R:R:W85 2.7 0 No Yes 0 6 0 1
L:L:F53 R:R:W85 13.03 0 No Yes 0 6 0 1
L:L:F53 R:R:I109 8.79 0 No No 0 6 0 1
L:L:P54 R:R:F110 4.33 0 No No 0 5 0 1
R:R:F78 R:R:I109 5.02 0 Yes No 6 6 2 1
R:R:I109 R:R:T81 3.04 0 No No 6 7 1 2
R:R:L82 R:R:W85 2.28 1 Yes Yes 7 6 2 1
R:R:W85 R:R:W95 2.81 0 Yes Yes 6 8 1 2
R:R:D92 R:R:Y93 27.59 0 No No 6 4 2 1
R:R:K178 R:R:Y93 2.39 0 No No 2 4 2 1
R:R:R168 R:R:S106 9.22 5 Yes No 5 5 1 2
R:R:F110 R:R:Y114 8.25 0 No Yes 5 6 1 2
R:R:L167 R:R:V164 4.47 0 No No 5 4 2 2
R:R:R168 R:R:V164 3.92 5 Yes No 5 4 1 2
R:R:L167 R:R:M183 7.07 0 No Yes 5 5 2 1
R:R:M183 R:R:R168 2.48 5 Yes Yes 5 5 1 1
R:R:E174 R:R:L173 3.98 0 No Yes 2 3 2 1
R:R:L173 R:R:T176 4.42 3 Yes No 3 3 1 2
R:R:L173 R:R:Q180 14.64 3 Yes No 3 2 1 1
R:R:K178 R:R:T176 7.51 0 No No 2 3 2 2
R:R:Q180 R:R:Y182 7.89 3 No Yes 2 4 1 2
R:R:M183 R:R:Y185 4.79 5 Yes No 5 5 1 1
R:R:E198 R:R:M183 4.06 5 Yes Yes 4 5 2 1
R:R:E194 R:R:Y185 4.49 5 No No 6 5 2 1
R:R:E194 R:R:E198 7.61 5 No Yes 6 4 2 2
R:R:L287 R:R:Y271 3.52 2 Yes No 4 4 2 1
R:R:M288 R:R:Y271 2.39 2 No No 4 4 1 1
R:R:L287 R:R:M288 4.24 2 Yes No 4 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7W0O_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.06
Number of Linked Nodes 287
Number of Links 313
Number of Hubs 38
Number of Links mediated by Hubs 143
Number of Communities 11
Number of Nodes involved in Communities 54
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 56
Number Of Links MetaPath 55
Number of Shortest Paths 105051
Length Of Smallest Path 3
Average Path Length 23.0041
Length of Longest Path 44
Minimum Path Strength 1.3
Average Path Strength 6.1146
Maximum Path Strength 17.245
Minimum Path Correlation 0.7
Average Path Correlation 0.934793
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.85714
Average % Of Corr. Nodes 33.9772
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.1088
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• G protein-coupled receptor-like   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP35414
Sequence
>7W0O_nogp_Chain_R
SSGALIPAI YMLVFLLGT TGNGLVLWT VFRSSREKR RSADIFIAS 
LAVADLTFV VTLPLWATY TYRDYDWPF GTFFCKLSS YLIFVNMYA 
SVFCLTGLS FDRYLAIVR PVANARLRL RVSGAVATA VLWVLAALL 
AMPVMVLRT TGDLENTTK VQCYMDYSM VATVSSEWA WEVGLGVSS 
TTVGFVVPF TIMLTCYFF IAQTIAGHF RKERIEGLR KRRRLLSII 
VVLVVTFAL CWMPYHLVK TLYMLGSLL HWPCDFDLF LMNIFPYCT 
CISYVNSCL NPFLYAFFD PRFRQ


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8XZFAPeptideApelinApelinHomo sapiensWN561-Gi1/β1/γ232024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZF (No Gprot) APeptideApelinApelinHomo sapiensWN561-32024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZGAPeptideApelinApelinHomo sapiensApelin-13-Gi1/β1/γ23.22024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZG (No Gprot) APeptideApelinApelinHomo sapiensApelin-13-3.22024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZHAPeptideApelinApelinHomo sapiensMM07-Gi1/β1/γ22.062024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZH (No Gprot) APeptideApelinApelinHomo sapiensMM07-2.062024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZJAPeptideApelinApelinHomo sapiensWN353-Gi1/β1/γ232024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZJ (No Gprot) APeptideApelinApelinHomo sapiensWN353-32024-03-20doi.org/10.1016/j.cell.2024.02.004
5VBLAPeptideApelinApelinHomo sapiensApelin mimetic peptide agonist--2.62017-05-31doi.org/10.1016/j.str.2017.04.008
8Z74APeptideApelinApelinHomo sapiensAgonistic antibody--3.012025-01-22doi.org/10.1038/s41467-024-55555-6
8Z7JAPeptideApelinApelinHomo sapiensAgonistic antibody-Gi1/β1/γ23.122025-01-22doi.org/10.1038/s41467-024-55555-6
8Z7J (No Gprot) APeptideApelinApelinHomo sapiensAgonistic antibody-3.122025-01-22doi.org/10.1038/s41467-024-55555-6
7SUSAPeptideApelinApelinHomo sapiensPubChem 122701908--2.72022-07-27doi.org/10.1038/s41594-022-00797-5
7W0LAPeptideApelinApelinHomo sapiensPubChem 122701908-Gi1/β1/γ23.572022-07-27doi.org/10.1038/s41594-022-00797-5
7W0L (No Gprot) APeptideApelinApelinHomo sapiensPubChem 122701908-3.572022-07-27doi.org/10.1038/s41594-022-00797-5
7W0MAPeptideApelinApelinHomo sapiensPubChem 122701908-Gi1/β1/γ23.712022-07-27doi.org/10.1038/s41594-022-00797-5
7W0M (No Gprot) APeptideApelinApelinHomo sapiensPubChem 122701908-3.712022-07-27doi.org/10.1038/s41594-022-00797-5
7W0NAPeptideApelinApelinHomo sapiensElabela-Gi1/β1/γ24.212022-07-27doi.org/10.1038/s41594-022-00797-5
7W0N (No Gprot) APeptideApelinApelinHomo sapiensElabela-4.212022-07-27doi.org/10.1038/s41594-022-00797-5
7W0OAPeptideApelinApelinHomo sapiensElabela-Gi1/β1/γ23.782022-07-27doi.org/10.1038/s41594-022-00797-5
7W0O (No Gprot) APeptideApelinApelinHomo sapiensElabela-3.782022-07-27doi.org/10.1038/s41594-022-00797-5
7W0PAPeptideApelinApelinHomo sapiensElabela-Gi1/β1/γ23.162022-07-27doi.org/10.1038/s41594-022-00797-5
7W0P (No Gprot) APeptideApelinApelinHomo sapiensElabela-3.162022-07-27doi.org/10.1038/s41594-022-00797-5
6KNMAPeptideApelinApelinHomo sapiensJN241-9--3.22020-01-29doi.org/10.1126/sciadv.aax7379
8XZIAPeptideApelinApelinHomo sapiensCMF-019-Gi1/β1/γ22.72024-03-20doi.org/10.1016/j.cell.2024.02.004
8XZI (No Gprot) APeptideApelinApelinHomo sapiensCMF-019-2.72024-03-20doi.org/10.1016/j.cell.2024.02.004
8S4DAPeptideApelinApelinHomo sapiensCMF-019--2.582024-12-04doi.org/10.1038/s41467-024-55381-w
8XQEAPeptideApelinApelinHomo sapiensApelin-13-Gi1/β1/γ23.482025-01-22doi.org/10.1038/s41467-024-55555-6
8XQE (No Gprot) APeptideApelinApelinHomo sapiensApelin-13-3.482025-01-22doi.org/10.1038/s41467-024-55555-6
8XQFAPeptideApelinApelinHomo sapiensApelin-13-Gi1/β1/γ23.132025-01-22doi.org/10.1038/s41467-024-55555-6
8XQF (No Gprot) APeptideApelinApelinHomo sapiensApelin-13-3.132025-01-22doi.org/10.1038/s41467-024-55555-6
8XQIAPeptideApelinApelinHomo sapiens---3.252025-01-22doi.org/10.1038/s41467-024-55555-6
8XQJAPeptideApelinApelinHomo sapiensJN241--2.952025-01-22doi.org/10.1038/s41467-024-55555-6
9JH3APeptideApelinApelinHomo sapiensCMF-019-Gi1/β1/γ22.932025-04-23doi.org/10.1073/pnas.2423432122
9JH3 (No Gprot) APeptideApelinApelinHomo sapiensCMF-019-2.932025-04-23doi.org/10.1073/pnas.2423432122




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7W0O_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.