Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:S531 4.7925429
2R:R:F533 4.215639
3R:R:L555 3.344539
4R:R:L562 3.81409
5R:R:F569 3.754509
6R:R:I575 3.79409
7R:R:L584 3.3409
8R:R:H585 7.2025409
9R:R:F591 6.17469
10R:R:H620 4.335409
11R:R:L624 5.1575409
12R:R:W629 7.21167619
13R:R:E633 8.345419
14R:R:P663 3.92667609
15R:R:Y674 7.1425405
16R:R:Y678 4.12333609
17R:R:R680 7.5408
18R:R:Y683 4.798526
19R:R:F692 4.655408
20R:R:F711 2.5425408
21R:R:M729 4.42407
22R:R:F747 6.6475405
23R:R:L748 6.215418
24R:R:W753 9.9325409
25R:R:F755 3.28408
26R:R:F771 5.625409
27R:R:N775 8.3575409
28R:R:C776 3.2275438
29R:R:Y783 5.495409
30R:R:L785 2.1408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L547 R:R:T772 10.67984.42NoNo099
2R:R:C776 R:R:T772 12.7521.69YesNo089
3R:R:C776 R:R:F533 15.54714.19YesYes389
4R:R:F597 R:R:L555 21.87092.44NoYes099
5R:R:F597 R:R:I601 15.142810.05NoNo097
6R:R:F533 R:R:L536 40.56124.87YesNo099
7R:R:F533 R:R:W753 58.13233.01YesYes099
8R:R:F533 R:R:F771 17.37574.29YesYes099
9R:R:L536 R:R:W685 39.43946.83NoNo099
10R:R:L555 R:R:S594 17.72117.51YesNo098
11R:R:F591 R:R:L559 17.91388.53YesNo698
12R:R:L559 R:R:S594 17.97546.01NoNo088
13R:R:C565 R:R:Y783 44.03095.38NoYes079
14R:R:C565 R:R:C587 44.15145.46NoNo078
15R:R:C587 R:R:L562 1003.17NoYes089
16R:R:F591 R:R:L562 19.37033.65YesYes099
17R:R:Q778 R:R:W753 75.61515.48NoYes099
18R:R:L590 R:R:Q778 80.41282.66NoNo099
19R:R:C587 R:R:I566 56.2933.27NoNo089
20R:R:I566 R:R:L570 28.1092.85NoNo096
21R:R:I566 R:R:I588 28.1095.89NoNo097
22R:R:F569 R:R:T568 21.71833.89YesNo099
23R:R:T568 R:R:Y783 21.95662.5NoYes099
24R:R:C787 R:R:F569 21.69694.19NoYes099
25R:R:C787 R:R:Y783 21.95669.41NoYes099
26R:R:F569 R:R:L584 43.0272.44YesYes099
27R:R:L570 R:R:L584 27.862.77NoYes069
28R:R:I588 R:R:L584 27.86542.85NoYes079
29R:R:F569 R:R:T580 20.90712.59YesNo099
30R:R:F569 R:R:H583 65.59135.66YesNo099
31R:R:I575 R:R:T580 19.0333.04YesNo099
32R:R:E633 R:R:R579 56.25282.33YesNo099
33R:R:E633 R:R:H583 56.841913.54YesNo199
34R:R:H585 R:R:L584 13.7645.14YesYes099
35R:R:H585 R:R:W629 10.564617.98YesYes099
36R:R:H620 R:R:L686 20.96333.86YesNo099
37R:R:L686 R:R:W685 38.668315.94NoNo099
38R:R:F692 R:R:L686 17.43194.87YesNo089
39R:R:H620 R:R:L624 11.59273.86YesYes099
40R:R:G634 R:R:I710 11.38661.76NoNo097
41R:R:I710 R:R:L637 13.26072.85NoNo079
42R:R:L637 R:R:Q745 33.42612.66NoNo099
43R:R:Q745 R:R:R579 50.95712.34NoNo099
44R:R:K717 R:R:T713 11.38393NoNo086
45R:R:K717 R:R:V641 13.26071.52NoNo089
46R:R:T714 R:R:V641 17.00361.59NoNo099
47R:R:L637 R:R:T714 18.72242.95NoNo099
48R:R:F711 R:R:Q745 16.612.34YesNo089
49R:R:N775 R:R:W753 14.015719.21YesYes099
50R:R:F771 R:R:N775 13.27418.46YesYes099
51R:R:F755 R:R:G756 16.51631.51YesNo089
52R:R:F771 R:R:G756 21.36766.02YesNo099
53R:R:I601 R:R:Y683 10.06933.63NoYes276
54R:R:L562 R:R:L590 80.66996.92YesNo099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 7YDJ_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.44
Number of Linked Nodes 244
Number of Links 255
Number of Hubs 30
Number of Links mediated by Hubs 114
Number of Communities 6
Number of Nodes involved in Communities 26
Number of Links involved in Communities 30
Path Summary
Number Of Nodes in MetaPath 55
Number Of Links MetaPath 54
Number of Shortest Paths 50929
Length Of Smallest Path 3
Average Path Length 16.4903
Length of Longest Path 32
Minimum Path Strength 1.26
Average Path Strength 4.94779
Maximum Path Strength 15.62
Minimum Path Correlation 0.7
Average Path Correlation 0.934471
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 51.191
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 36.9648
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• response to stimulus   • immune response   • immune system process   • regulation of biological process   • signaling   • biological regulation   • cell-cell signaling   • cellular process   • cell communication   • cellular response to stimulus   • regulation of cellular process   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • cell surface receptor signaling pathway   • cell adhesion   • defense response   • response to stress   • inflammatory response   • cellular anatomical structure   • anchoring junction   • cell junction   • focal adhesion   • cell-substrate junction   • membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle
Gene OntologyCellular Component• cellular anatomical structure   • anchoring junction   • cell junction   • focal adhesion   • cell-substrate junction   • membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • cell periphery   • plasma membrane   • intracellular anatomical structure   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • cytoplasm   • organelle membrane   • secretory granule membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • synapse   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • D2 dopamine receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • protein phosphatase activator activity   • enzyme activator activity   • phosphatase activator activity   • molecular function activator activity   • phosphatase regulator activity   • protein phosphatase regulator activity   • protein phosphatase binding   • phosphatase binding   • protein phosphatase 2A binding   • D5 dopamine receptor binding   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • response to peptide hormone   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • cellular response to forskolin   • response to forskolin   • response to xenobiotic stimulus   • regulation of body fluid levels   • wound healing   • hemostasis   • blood coagulation   • response to stress   • coagulation   • response to wounding   • circulatory system process   • regulation of blood pressure   • blood circulation   • cellular developmental process   • cell differentiation   • regulation of vascular associated smooth muscle cell migration   • negative regulation of locomotion   • vascular associated smooth muscle cell migration   • regulation of cell motility   • negative regulation of vascular associated smooth muscle cell migration   • regulation of smooth muscle cell migration   • smooth muscle cell migration   • muscle cell migration   • negative regulation of smooth muscle cell migration   • regulation of locomotion   • regulation of cell migration   • negative regulation of cell motility   • locomotion   • negative regulation of cell migration   • regulation of fibroblast migration   • fibroblast migration   • ameboidal-type cell migration   • embryo development ending in birth or egg hatching   • chordate embryonic development   • embryo development   • in utero embryonic development   • regulation of developmental process   • regulation of cell shape   • cell morphogenesis   • regulation of cell morphogenesis   • anatomical structure morphogenesis   • regulation of anatomical structure morphogenesis   • Rho-activating G protein-coupled receptor signaling pathway   • catabolic process   • proteolysis involved in protein catabolic process   • proteasome-mediated ubiquitin-dependent protein catabolic process   • macromolecule catabolic process   • regulation of ubiquitin-dependent protein catabolic process   • regulation of proteolysis involved in protein catabolic process   • regulation of proteolysis   • modification-dependent macromolecule catabolic process   • proteolysis   • protein metabolic process   • regulation of protein metabolic process   • proteasomal protein catabolic process   • protein catabolic process   • regulation of macromolecule metabolic process   • regulation of catabolic process   • regulation of proteasomal ubiquitin-dependent protein catabolic process   • modification-dependent protein catabolic process   • regulation of proteasomal protein catabolic process   • ubiquitin-dependent protein catabolic process   • macromolecule metabolic process   • regulation of protein catabolic process   • Rho protein signal transduction   • TOR signaling   • regulation of TOR signaling   • regulation of signal transduction   • regulation of intracellular signal transduction   • regulation of response to stimulus   • regulation of vascular associated smooth muscle cell proliferation   • negative regulation of cell population proliferation   • regulation of smooth muscle cell proliferation   • negative regulation of vascular associated smooth muscle cell proliferation   • smooth muscle cell proliferation   • negative regulation of smooth muscle cell proliferation   • regulation of cell population proliferation   • muscle cell proliferation   • vascular associated smooth muscle cell proliferation   • limb development   • appendage development   • embryonic limb morphogenesis   • embryonic morphogenesis   • embryonic appendage morphogenesis   • appendage morphogenesis   • embryonic digit morphogenesis   • limb morphogenesis   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • nucleoplasm   • Golgi apparatus   • ciliary basal body   • brush border membrane   • cluster of actin-based cell projections   • brush border   • apical part of cell   • plasma membrane region   • apical plasma membrane   • cell projection membrane   • somatodendritic compartment   • cell body   • neuronal cell body   • lateral plasma membrane
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP48960
Sequence
>7YDJ_nogp_Chain_R
SSFAILMAH YDVEDWKLT LITRVGLAL SLFCLLLCI LTFLLVRPI 
QGSRTTIHL HLCICLFVG STIFLAGIE NEGGQVGLR CRLVAGLLH 
YCFLAAFCW MSLEGLELY FLVVRVFQG QGLSTRWLC LIGYGVPLL 
IVGVSAAIY SKGYGRPRY CWLDFEQGF LWSFLGPVT FIILCNAVI 
FVTTVWKLT QKFSEINPD MKKLKKARA LTITAIAQL FLLGCTWVF 
GLFIFDDRS LVLTYVFTI LNCLQGAFL YLLHCLLNK KVREEYRKW 
ACLV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7YDHB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi2-G13)/β1/γ23.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDH (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDMB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-Gs-CtGq)/β1/γ22.892023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDM (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--2.892023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDPB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-Gs)/β1/γ23.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDP (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
8IKLB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1L-G13)/β1/γ22.332024-01-24doi.org/10.1016/j.molcel.2023.12.020
8IKL (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--2.332024-01-24doi.org/10.1016/j.molcel.2023.12.020
8IKJB2AdhesionAdhesionADGRE5Homo sapiens---3.22024-02-14doi.org/10.1016/j.molcel.2023.12.020
7YDJB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-G12)/β1/γ23.032023-07-12To be published
7YDJ (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.032023-07-12To be published




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