Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:S532 3.905419
2R:R:F533 4.92571719
3R:R:L536 7.4725419
4R:R:M537 4.2125419
5R:R:H539 7.4775416
6R:R:D544 6.9775418
7R:R:L547 8.1025419
8R:R:L555 5.2625419
9R:R:R579 8.1125429
10R:R:H583 9.54429
11R:R:H585 9.265449
12R:R:F591 4.3425409
13R:R:C612 4.74459
14R:R:H620 6.3725419
15R:R:F627 11.28419
16R:R:W629 10.484549
17R:R:M630 4.304519
18R:R:F639 5.6575408
19R:R:W654 3.0675406
20R:R:Y660 7.8325449
21R:R:P663 4.68569
22R:R:Y674 5.5725405
23R:R:Y678 4.93714719
24R:R:R680 5.8375408
25R:R:Y683 8.696536
26R:R:W685 8.45333619
27R:R:F692 6.89333618
28R:R:L693 4.8725417
29R:R:F696 6.915409
30R:R:F711 7.53408
31R:R:N726 5.2925478
32R:R:M729 5.475477
33R:R:L748 7.496528
34R:R:W753 8.97719
35R:R:F755 5.1025408
36R:R:Y769 7.516519
37R:R:F771 9.285419
38R:R:C776 4.345418
39R:R:Q778 5.5375419
40R:R:Y783 7.64667609
41R:R:E796 5.175408
42R:R:Y797 6.21409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L547 R:R:S532 10.66437.51YesYes199
2R:R:S532 R:R:T551 14.12173.2YesNo199
3R:R:F533 R:R:T551 14.87085.19YesNo199
4R:R:F533 R:R:L536 23.75297.31YesYes199
5R:R:L536 R:R:W685 24.32917.97YesYes199
6R:R:I535 R:R:W685 25.05353.52NoYes089
7R:R:I535 R:R:Y683 23.695313.3NoYes086
8R:R:F533 R:R:W753 35.85784.01YesYes199
9R:R:F696 R:R:W685 32.820213.03YesYes099
10R:R:F696 R:R:M537 38.01453.73YesYes099
11R:R:M537 R:R:W753 38.83364.65YesYes199
12R:R:A538 R:R:I759 10.46673.25NoNo098
13R:R:G756 R:R:I759 13.89123.53NoNo098
14R:R:L693 R:R:W685 10.67674.56YesYes179
15R:R:D541 R:R:Y683 12.01025.75NoYes356
16R:R:D541 R:R:R680 10.57795.96NoYes058
17R:R:C587 R:R:L562 11.54923.17NoNo089
18R:R:C565 R:R:C587 13.16685.46NoNo078
19R:R:C565 R:R:Y783 14.77614.03NoYes079
20R:R:L788 R:R:Y783 27.63429.38NoYes089
21R:R:L784 R:R:L788 28.86894.15NoNo058
22R:R:L784 R:R:L789 30.1122.77NoNo058
23R:R:I740 R:R:L789 31.35911.43NoNo078
24R:R:I740 R:R:L785 32.51981.43NoNo078
25R:R:A744 R:R:L785 33.77926.3NoNo098
26R:R:A744 R:R:H786 35.07982.93NoNo099
27R:R:H786 R:R:L782 99.19333.86NoNo098
28R:R:L782 R:R:Q778 1003.99NoYes089
29R:R:Q778 R:R:W753 81.10398.76YesYes199
30R:R:F569 R:R:H583 25.079.05NoYes099
31R:R:H583 R:R:L748 20.1359YesYes298
32R:R:H786 R:R:L748 71.061111.57NoYes098
33R:R:F569 R:R:T580 18.91673.89NoNo099
34R:R:E796 R:R:V572 12.6077.13YesNo089
35R:R:I575 R:R:V572 13.89539.22NoNo099
36R:R:I575 R:R:T580 16.41427.6NoNo099
37R:R:E633 R:R:L748 44.62059.28NoYes298
38R:R:E633 R:R:I582 49.32916.83NoNo098
39R:R:I582 R:R:W629 36.94447.05NoYes089
40R:R:I582 R:R:L655 12.14195.71NoNo087
41R:R:W629 R:R:Y660 24.452612.54YesYes499
42R:R:F627 R:R:M630 21.80616.22YesYes199
43R:R:F627 R:R:V700 24.185118.35YesNo098
44R:R:F696 R:R:V700 17.69845.24YesNo098
45R:R:A625 R:R:C589 18.81383.61NoNo098
46R:R:C589 R:R:Y660 20.32844.03NoYes089
47R:R:C612 R:R:V608 10.66433.42YesNo096
48R:R:R613 R:R:V608 11.96085.23NoNo066
49R:R:R613 R:R:Y678 13.24912.06NoYes069
50R:R:H620 R:R:Y678 20.38618.71YesYes199
51R:R:F696 R:R:H620 29.05835.66YesYes099
52R:R:F692 R:R:L686 13.77596.09YesNo189
53R:R:L686 R:R:W685 14.195818.22NoYes199
54R:R:L624 R:R:P663 11.11716.57NoYes099
55R:R:A625 R:R:P663 17.29093.74NoYes099
56R:R:F627 R:R:I703 57.59382.51YesNo099
57R:R:I703 R:R:N707 55.28892.83NoNo099
58R:R:I710 R:R:Y638 17.22514.84NoNo078
59R:R:I710 R:R:L637 18.62864.28NoNo079
60R:R:L637 R:R:L749 22.55932.77NoNo099
61R:R:L749 R:R:N707 52.951115.1NoNo099
62R:R:F692 R:R:Y674 14.64857.22YesYes085
63R:R:F711 R:R:L749 32.15763.65YesNo089
64R:R:F711 R:R:V715 25.55987.87YesNo086
65R:R:L738 R:R:T719 22.81864.42NoNo098
66R:R:T719 R:R:V715 24.19741.59NoNo086
67R:R:F722 R:R:N726 10.22399.67NoYes788
68R:R:F722 R:R:K734 17.467914.89NoNo087
69R:R:K734 R:R:L738 18.87555.64NoNo079
70R:R:I704 R:R:V754 10.19513.07NoNo066
71R:R:I704 R:R:V700 11.61923.07NoNo068
72R:R:F627 R:R:W753 30.712918.04YesYes199
73R:R:M630 R:R:Q778 20.88414.08YesYes199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8IKL_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.2
Number of Linked Nodes 253
Number of Links 285
Number of Hubs 42
Number of Links mediated by Hubs 155
Number of Communities 7
Number of Nodes involved in Communities 55
Number of Links involved in Communities 76
Path Summary
Number Of Nodes in MetaPath 74
Number Of Links MetaPath 73
Number of Shortest Paths 46423
Length Of Smallest Path 3
Average Path Length 14.2691
Length of Longest Path 32
Minimum Path Strength 1.375
Average Path Strength 6.41955
Maximum Path Strength 18.195
Minimum Path Correlation 0.7
Average Path Correlation 0.930934
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 52.2326
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 40.8029
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• response to stimulus   • immune response   • immune system process   • regulation of biological process   • signaling   • biological regulation   • cell-cell signaling   • cellular process   • cell communication   • cellular response to stimulus   • regulation of cellular process   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • cell surface receptor signaling pathway   • cell adhesion   • defense response   • response to stress   • inflammatory response   • cellular anatomical structure   • anchoring junction   • cell junction   • focal adhesion   • cell-substrate junction   • membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle
Gene OntologyCellular Component• cellular anatomical structure   • anchoring junction   • cell junction   • focal adhesion   • cell-substrate junction   • membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • cell periphery   • plasma membrane   • intracellular anatomical structure   • intracellular vesicle   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • vesicle membrane   • cytoplasmic vesicle   • secretory granule   • secretory vesicle   • cytoplasm   • organelle membrane   • secretory granule membrane   • binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • GDP binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • cation binding   • metal ion binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • D5 dopamine receptor binding   • dopamine receptor binding   • GTPase regulator activity   • enzyme regulator activity   • guanyl-nucleotide exchange factor activity   • nucleoside-triphosphatase regulator activity   • molecular function regulator activity   • G protein activity   • cellular process   • cell division   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • regulation of molecular function   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • negative regulation of molecular function   • negative regulation of catalytic activity   • negative regulation of adenylate cyclase activity   • positive regulation of autophagy   • catabolic process   • macroautophagy   • autophagy   • positive regulation of biological process   • regulation of catabolic process   • regulation of autophagy   • positive regulation of catabolic process   • positive regulation of metabolic process   • regulation of macroautophagy   • metabolic process   • positive regulation of macroautophagy   • process utilizing autophagic mechanism   • regulation of metabolic process   • positive regulation of cellular process   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • nucleoside phosphate metabolic process   • ribose phosphate metabolic process   • purine nucleoside triphosphate metabolic process   • GTP metabolic process   • carbohydrate derivative metabolic process   • primary metabolic process   • nucleotide metabolic process   • purine-containing compound metabolic process   • nucleobase-containing compound metabolic process   • purine nucleotide metabolic process   • ribonucleotide metabolic process   • organophosphate metabolic process   • nucleobase-containing small molecule metabolic process   • purine ribonucleoside triphosphate metabolic process   • phosphate-containing compound metabolic process   • small molecule metabolic process   • nucleoside triphosphate metabolic process   • purine ribonucleotide metabolic process   • phosphorus metabolic process   • multicellular organismal process   • system process   • circulatory system process   • regulation of blood pressure   • regulation of biological quality   • blood circulation   • developmental process   • cellular developmental process   • cell differentiation   • regulation of cell motility   • regulation of fibroblast migration   • fibroblast migration   • regulation of locomotion   • ameboidal-type cell migration   • regulation of cell migration   • cell migration   • cell motility   • locomotion   • multicellular organism development   • embryo development ending in birth or egg hatching   • chordate embryonic development   • anatomical structure development   • embryo development   • in utero embryonic development   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • regulation of developmental process   • regulation of cell shape   • cell morphogenesis   • regulation of cell morphogenesis   • anatomical structure morphogenesis   • regulation of anatomical structure morphogenesis   • regulation of body fluid levels   • wound healing   • cell activation   • hemostasis   • blood coagulation   • response to stress   • coagulation   • response to wounding   • platelet activation   • branching morphogenesis of an epithelial tube   • angiogenesis   • tube morphogenesis   • epithelial tube morphogenesis   • blood vessel development   • system development   • epithelium development   • blood vessel morphogenesis   • tube development   • morphogenesis of an epithelium   • tissue development   • vasculature development   • circulatory system development   • branching involved in blood vessel morphogenesis   • tissue morphogenesis   • morphogenesis of a branching structure   • anatomical structure formation involved in morphogenesis   • morphogenesis of a branching epithelium   • regulation of cellular component organization   • cellular component organization   • cellular component biogenesis   • cellular component assembly   • regulation of postsynapse assembly   • cell junction assembly   • regulation of synapse structure or activity   • synapse organization   • cellular component organization or biogenesis   • regulation of synapse assembly   • postsynapse organization   • postsynapse assembly   • regulation of postsynapse organization   • nervous system development   • regulation of cellular component biogenesis   • regulation of cell junction assembly   • regulation of synapse organization   • cell junction organization   • synapse assembly   • Rho-activating G protein-coupled receptor signaling pathway   • regulation of signaling   • small GTPase-mediated signal transduction   • regulation of small GTPase mediated signal transduction   • regulation of signal transduction   • intracellular signal transduction   • regulation of intracellular signal transduction   • regulation of response to stimulus   • intracellular signaling cassette   • regulation of cell communication   • Rho protein signal transduction   • midbody   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • Golgi apparatus   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • pigment granule   • melanosome   • brush border membrane   • cluster of actin-based cell projections   • brush border   • apical part of cell   • plasma membrane region   • apical plasma membrane   • cell projection membrane   • postsynapse   • synapse   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • cell population proliferation   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP48960
Sequence
>8IKL_nogp_Chain_R
SSFAILMAH YDVEDWKLT LITRVGLAL SLFCLLLCI LTFLLVRPI 
QGSRTTIHL HLCICLFVG STIFLAGIE NEGGQVGLR CRLVAGLLH 
YCFLAAFCW MSLEGLELY FLVVRVFQG QGLSTRWLC LIGYGVPLL 
IVGVSAAIY SKGYGRPRY CWLDFEQGF LWSFLGPVT FIILCNAVI 
FVTTVWKLT QKFSEINPD MKKLKKARA LTITAIAQL FLLGCTWVF 
GLFIFDDRS LVLTYVFTI LNCLQGAFL YLLHCLLNK KVREEYRKW 
A


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7YDHB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi2-G13)/β1/γ23.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDH (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDMB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-Gs-CtGq)/β1/γ22.892023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDM (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--2.892023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDPB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-Gs)/β1/γ23.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
7YDP (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.12023-07-12doi.org/10.1016/j.chembiol.2023.08.003
8IKLB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1L-G13)/β1/γ22.332024-01-24doi.org/10.1016/j.molcel.2023.12.020
8IKL (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--2.332024-01-24doi.org/10.1016/j.molcel.2023.12.020
8IKJB2AdhesionAdhesionADGRE5Homo sapiens---3.22024-02-14doi.org/10.1016/j.molcel.2023.12.020
7YDJB2AdhesionAdhesionADGRE5Homo sapiens--chim(NtGi1-G12)/β1/γ23.032023-07-12To be published
7YDJ (No Gprot) B2AdhesionAdhesionADGRE5Homo sapiens--3.032023-07-12To be published




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