Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:S205 6.555457
2R:R:Y207 4.9925407
3R:R:Q218 4.072515
4R:R:N219 5.458517
5R:R:F222 9.702516
6R:R:E226 8.3075418
7R:R:T251 7.3554109
8R:R:F252 7.18409
9R:R:Y262 6.4625479
10R:R:L267 6.04448
11R:R:F268 8.028508
12R:R:W281 8.568527
13R:R:Q284 7.72469
14R:R:F285 7.74468
15R:R:R296 8.186556
16R:R:D298 7.092557
17R:R:T300 6.525457
18R:R:E305 4.69407
19R:R:F318 7.41833699
20R:R:Y322 8.375499
21R:R:Y323 4.94408
22R:R:W331 10.55589
23R:R:L335 4.6225408
24R:R:T336 5.4775407
25R:R:Y337 8.2375477
26R:R:W339 5.29167609
27R:R:F343 5.744509
28R:R:P352 4.5975407
29R:R:L353 5.5225478
30R:R:F360 6.56479
31R:R:I375 8.6175497
32R:R:D384 8.665418
33R:R:V386 5.3175415
34R:R:Y394 6.552515
35R:R:Y397 7.7275433
36R:R:L412 4.6175407
37R:R:F418 7.4375408
38R:R:F455 5.84167648
39R:R:F460 4.2225405
40R:R:F467 4.4975407
41R:R:W480 9.66409
42R:R:N511 7.55754124
43R:R:V517 4.4754116
44R:R:F526 6.17833629
45R:R:M532 4.192548
46R:R:W535 9.405449
47R:R:W545 5.9354109
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:P203 R:R:W206 10.3185.4NoNo044
2R:R:N202 R:R:P203 11.32046.52NoNo054
3R:R:N202 R:R:S205 13.30938.94NoYes057
4R:R:R296 R:R:S205 14.01356.59YesYes567
5R:R:F303 R:R:R296 44.445914.97NoYes036
6R:R:F303 R:R:K395 46.03977.44NoNo033
7R:R:D382 R:R:K395 46.82728.3NoNo093
8R:R:D382 R:R:Y394 47.60934.6NoYes095
9R:R:D384 R:R:Y394 53.903816.09YesYes185
10R:R:D384 R:R:N219 31.92415.39YesYes187
11R:R:N219 R:R:P220 13.68294.89YesNo078
12R:R:D384 R:R:V386 21.39388.76YesYes185
13R:R:H227 R:R:V386 15.61274.15NoYes175
14R:R:H227 R:R:Q218 13.71527.42NoYes175
15R:R:L221 R:R:N219 12.82294.12NoYes067
16R:R:V488 R:R:Y207 11.39845.05NoYes067
17R:R:F484 R:R:V488 13.30937.87NoNo066
18R:R:K519 R:R:Y233 20.380622.69NoNo076
19R:R:F237 R:R:Y233 10.83411.35NoNo046
20R:R:F237 R:R:F526 12.47359.65NoYes049
21R:R:F526 R:R:T241 35.82937.78YesNo097
22R:R:I530 R:R:T241 37.89347.6NoNo077
23R:R:C244 R:R:I530 39.24264.91NoNo067
24R:R:C244 R:R:S533 39.90926.89NoNo069
25R:R:S533 R:R:T245 40.57034.8NoNo098
26R:R:N271 R:R:T245 43.16124.39NoNo098
27R:R:N271 R:R:T248 43.79555.85NoNo098
28R:R:T248 R:R:V536 44.40837.93NoNo088
29R:R:F252 R:R:V536 50.8053.93YesNo098
30R:R:F252 R:R:F268 52.433718.22YesYes098
31R:R:F268 R:R:Y269 57.58326.19YesNo088
32R:R:W331 R:R:Y269 55.873921.22YesNo898
33R:R:V334 R:R:W331 61.71963.68NoYes079
34R:R:I266 R:R:V334 55.99754.61NoNo087
35R:R:I266 R:R:L335 56.46525.71NoYes088
36R:R:G456 R:R:L335 63.63861.71NoYes078
37R:R:G456 R:R:L419 63.70841.71NoNo077
38R:R:F460 R:R:L419 81.06543.65YesNo057
39R:R:F460 R:R:L412 1004.87YesYes057
40R:R:F467 R:R:L412 99.37924.87YesYes077
41R:R:F467 R:R:L405 98.70996.09YesNo078
42R:R:F474 R:R:L405 98.23693.65NoNo068
43R:R:F474 R:R:Y397 97.22634.13NoYes063
44R:R:E481 R:R:Y397 95.54927.86NoYes053
45R:R:E481 R:R:Q477 95.25096.37NoNo056
46R:R:Q477 R:R:W480 94.94725.48NoYes069
47R:R:N476 R:R:W480 92.3249.04NoYes069
48R:R:N476 R:R:Y472 91.61459.3NoNo067
49R:R:V517 R:R:Y472 90.53943.79YesNo1167
50R:R:C469 R:R:V517 90.13093.42NoYes076
51R:R:C469 R:R:N521 88.96187.87NoNo078
52R:R:H470 R:R:N521 87.327712.75NoNo078
53R:R:H470 R:R:R400 85.42486.77NoNo079
54R:R:R400 R:R:Y394 84.99214.12NoYes095
55R:R:L522 R:R:Y233 11.21833.52NoNo076
56R:R:F526 R:R:L522 11.59193.65YesNo297
57R:R:K519 R:R:M230 17.03714.32NoNo077
58R:R:I234 R:R:M230 13.67224.37NoNo077
59R:R:F285 R:R:I234 11.98163.77YesNo087
60R:R:F332 R:R:F460 19.57165.36NoYes095
61R:R:F332 R:R:T336 19.51253.89NoYes097
62R:R:F418 R:R:T336 38.19175.19YesYes087
63R:R:F418 R:R:Y337 31.633815.47YesYes087
64R:R:L353 R:R:Y337 14.52155.86YesYes787
65R:R:L353 R:R:Y262 11.02214.69YesYes789
66R:R:P263 R:R:Y262 22.18674.17NoYes099
67R:R:L419 R:R:T336 20.8247.37NoYes077
68R:R:F360 R:R:Y337 16.18514.13YesYes797
69R:R:F360 R:R:Y262 15.4468.25YesYes799
70R:R:L267 R:R:L335 17.7018.3YesYes088
71R:R:E310 R:R:R296 27.54058.14NoYes086
72R:R:E305 R:R:E310 25.71295.07YesNo078
73R:R:C314 R:R:E305 20.10114.56NoYes097
74R:R:C314 R:R:C390 19.14697.28NoNo099
75R:R:F318 R:R:V381 16.252315.73YesNo098
76R:R:C390 R:R:V381 17.22263.42NoNo098
77R:R:F343 R:R:W339 12.11336.01YesYes099
78R:R:L452 R:R:W339 17.00767.97NoYes089
79R:R:L335 R:R:L452 17.77892.77YesNo088
80R:R:P263 R:R:Q351 19.97473.16NoNo097
81R:R:P352 R:R:Q351 13.46257.9YesNo077
82R:R:F360 R:R:V334 10.81256.55YesNo097
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8CXO
Class F
SubFamily Protein
Type Frizzled
SubType SMO
Species Mus musculus
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.7
Date 2022-08-03
D.O.I. 10.1038/s41467-022-32125-2
Net Summary
Imin 3.42
Number of Linked Nodes 322
Number of Links 351
Number of Hubs 47
Number of Links mediated by Hubs 170
Number of Communities 12
Number of Nodes involved in Communities 58
Number of Links involved in Communities 74
Path Summary
Number Of Nodes in MetaPath 83
Number Of Links MetaPath 82
Number of Shortest Paths 65144
Length Of Smallest Path 3
Average Path Length 23.7471
Length of Longest Path 57
Minimum Path Strength 1.195
Average Path Strength 6.63204
Maximum Path Strength 18.145
Minimum Path Correlation 0.7
Average Path Correlation 0.946746
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.22222
Average % Of Corr. Nodes 45.5734
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.1201
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ99835
Sequence
>8CXO_Chain_R
GQCEAPLVR TDNPKSWYE DVEGCGIQC QNPLFTEAE HQDMHSYIA 
AFGAVTGLC TLFTLATFV ADWRNSNRY PAVILFYVN ACFFVGSIG 
WLAQFMDGA RREIVCRAD GTMRFGEPT SSETLSCVI IFVIVYYAL 
MAGVVWFVV LTYAWHTSF KALGTTYQP LSGKTSYFH LLTWSLPFV 
LTVAILAVA QVDGDSVSG ICFVGYKNY RYRAGFVLA PIGLVLIVG 
GYFLIRGVM TLFSIKSNH PGLLNETML RLGIFGFLA FGFVLITFS 
CHFYDFFNQ AEWERSFRD YVLCQANVT DCEIKNRPS LLVEKINLF 
AMFGTGIAM STWVWTKAT LLIWRRTWC RL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4JKVFProteinFrizzledSMOHomo sapiensTaladegib (LY2940680)--2.452013-04-2410.1038/nature12167
4N4WFProteinFrizzledSMOHomo sapiens-SANT-1-2.82014-01-2210.1038/ncomms5355
4O9RFProteinFrizzledSMOHomo sapiensCyclopamine--3.22014-03-0510.1038/ncomms4309
4QIMFProteinFrizzledSMOHomo sapiensPubChem 24905375--2.612014-07-2310.1038/ncomms5355
4QINFProteinFrizzledSMOHomo sapiensSAG1.5--2.62014-07-2310.1038/ncomms5355
5L7DFProteinFrizzledSMOHomo sapiens-Cholesterol-3.22016-07-2010.1038/nature18934
5L7IFProteinFrizzledSMOHomo sapiensVismodegib--3.32016-07-2010.1038/nature18934
5V56FProteinFrizzledSMOHomo sapiensTC114--2.92017-05-2410.1038/ncomms15383
5V57FProteinFrizzledSMOHomo sapiensTC114--32017-05-2410.1038/ncomms15383
6D32FProteinFrizzledSMOXenopus laevisCyclopamineCyclopamine-3.752018-05-2310.1016/j.cell.2018.04.029
6D35FProteinFrizzledSMOXenopus laevis-Cholesterol-3.92018-05-2310.1016/j.cell.2018.04.029
6O3CFProteinFrizzledSMOMus musculusSAG21kCholesterol-2.82019-07-0310.1038/s41586-019-1355-4
6OT0FProteinFrizzledSMOHomo sapiens-25(S)-EpoxycholesterolGi1/&β;1/&γ;23.842019-06-1210.1038/s41586-019-1286-0
6XBJFProteinFrizzledSMOHomo sapiens-CholesterolGi1/&β;1/&γ;23.882020-09-3010.1038/s41589-020-0646-2
6XBKFProteinFrizzledSMOHomo sapiens-CholesterolGi1/&β;1/&γ;23.242020-09-3010.1038/s41589-020-0646-2
6XBLFProteinFrizzledSMOHomo sapiensSAGCholesterolGi1/&β;1/&γ;23.962020-09-3010.1038/s41589-020-0646-2
6XBMFProteinFrizzledSMOHomo sapiens-25(S)-EpoxycholesterolGi1/&β;1/&γ;23.142020-09-3010.1038/s41589-020-0646-2
7ZI0FProteinFrizzledSMOHomo sapiensSAGCholesterol-32022-06-1510.1126/sciadv.abm5563
8CXOFProteinFrizzledSMOMus musculus---3.72022-08-0310.1038/s41467-022-32125-2
4JKV (Dimer)FProteinFrizzledSMOHomo sapiensTaladegib (LY2940680)--2.452013-04-2410.1038/nature12167




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8CXO.zip



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