Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:D95 11.02535
2R:R:S96 4.9325406
3R:R:W109 4.63437
4R:R:R117 7.1125455
5R:R:I122 5.42427
6R:R:Y130 7.026537
7R:R:L141 5.4625407
8R:R:R144 7.33486
9R:R:L146 4.2875406
10R:R:T150 3.542527
11R:R:R151 6.6925425
12R:R:W163 11.436528
13R:R:F166 12.69536
14R:R:F187 8.05406
15R:R:E194 5.095446
16R:R:P196 3.345407
17R:R:W206 5.594554
18R:R:Y207 7.284107
19R:R:N219 6.055407
20R:R:F222 5.42333616
21R:R:H227 6.5975407
22R:R:H231 8.5625407
23R:R:Y262 7.282509
24R:R:F268 7.6375408
25R:R:Y269 7.8325468
26R:R:F275 3.48405
27R:R:W281 6.40333617
28R:R:F285 8.225408
29R:R:R296 7.46406
30R:R:R302 6.33254146
31R:R:E305 7.8565147
32R:R:C314 5.89754149
33R:R:V315 4.3875407
34R:R:Y322 6.036519
35R:R:Y323 3.9125408
36R:R:W331 13.104569
37R:R:F332 6.95419
38R:R:Y337 7.33407
39R:R:W339 10.16409
40R:R:H340 5.0075407
41R:R:P352 3.666507
42R:R:F360 5.5675409
43R:R:H361 7.5125469
44R:R:R384 6.262518
45R:R:V386 6.835415
46R:R:F391 4.215418
47R:R:Y394 8.5175415
48R:R:M449 4.655409
49R:R:F455 7.555418
50R:R:F462 5.555407
51R:R:H470 8.97517
52R:R:F474 3.2075406
53R:R:W480 15.5575409
54R:R:F484 4.6275406
55R:R:R485 7.94754105
56R:R:Q491 3.0525404
57R:R:M525 7.2625415
58R:R:F526 6.44833619
59R:R:W535 9.36409
60W:W:?1 8.85751610
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L141 R:R:P175 11.70973.28YesNo075
2R:R:L141 R:R:V139 11.70972.98YesNo077
3R:R:L141 R:R:L92 25.91668.3YesNo078
4R:R:L92 R:R:R173 27.20242.43NoNo084
5R:R:F166 R:R:R173 29.77113.21YesNo064
6R:R:F166 R:R:L167 22.076517.05YesNo067
7R:R:L167 R:R:W163 22.924312.53NoYes078
8R:R:R151 R:R:W163 51.55116YesYes258
9R:R:R151 R:R:T150 41.53933.88YesYes257
10R:R:I122 R:R:T150 28.63784.56YesYes277
11R:R:I122 R:R:L112 27.0822.85YesNo078
12R:R:L112 R:R:W119 26.22363.42NoNo089
13R:R:Q123 R:R:W119 23.640129.57NoNo089
14R:R:F187 R:R:Q123 22.7775.86YesNo068
15R:R:F187 R:R:I185 19.3157.54YesNo064
16R:R:I185 R:R:P84 14.09326.77NoNo044
17R:R:L83 R:R:P84 13.21953.28NoNo074
18R:R:L83 R:R:N76 12.34496.87NoNo074
19R:R:L73 R:R:N76 10.59284.12NoNo074
20R:R:F166 R:R:Y130 10.58948.25YesYes367
21R:R:W109 R:R:Y130 15.59826.75YesYes377
22R:R:V157 R:R:W109 22.39176.13NoYes067
23R:R:V157 R:R:W163 36.996423.29NoYes068
24R:R:I156 R:R:V157 59.21681.54NoNo056
25R:R:I156 R:R:V210 59.56611.54NoNo055
26R:R:V210 R:R:Y207 59.91585.05NoYes057
27R:R:I215 R:R:Y207 99.700110.88NoYes057
28R:R:F484 R:R:I215 1005.02YesNo065
29R:R:F484 R:R:P220 32.79077.22YesNo068
30R:R:N219 R:R:P220 32.87856.52YesNo078
31R:R:N219 R:R:R384 61.18723.62YesYes078
32R:R:R384 R:R:Y394 96.282810.29YesYes185
33R:R:F391 R:R:Y394 30.4254.13YesYes185
34R:R:F391 R:R:Y322 37.10055.16YesYes189
35R:R:F318 R:R:Y322 33.10698.25NoYes099
36R:R:F318 R:R:V381 31.406119.66NoNo098
37R:R:E305 R:R:V381 30.96147.13YesNo078
38R:R:E305 R:R:R302 23.023612.79YesYes1476
39R:R:R296 R:R:R302 21.8654.26YesYes066
40R:R:D298 R:R:R296 17.64643.57NoYes076
41R:R:D298 R:R:T200 12.86795.78NoNo076
42R:R:T200 R:R:W206 12.38477.28NoYes064
43R:R:E158 R:R:W163 36.96474.36NoYes078
44R:R:E158 R:R:R159 37.69593.49NoNo075
45R:R:R159 R:R:R485 38.0616.4NoYes055
46R:R:R485 R:R:Y207 39.11745.14YesYes1057
47R:R:F484 R:R:L221 67.87763.65YesNo066
48R:R:L221 R:R:N219 32.59749.61NoYes067
49R:R:F222 R:R:L221 35.55713.65YesNo066
50R:R:F222 R:R:R384 33.3544.28YesYes168
51R:R:Y394 W:W:?1 65.35267.01YesYes150
52R:R:F332 W:W:?1 48.80833.64YesYes190
53R:R:F332 R:R:F455 41.33976.43YesYes198
54R:R:F455 R:R:W535 41.110916.04YesYes089
55R:R:W339 R:R:W535 35.7368.43YesYes099
56R:R:L335 R:R:W339 29.937121.64NoYes089
57R:R:I266 R:R:L335 29.49955.71NoNo088
58R:R:I266 R:R:W331 14.10615.87NoYes089
59R:R:I266 R:R:Y262 15.04364.84NoYes089
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:I234 R:R:W281 4.7 1 No Yes 7 7 2 1
R:R:F526 R:R:I234 3.77 1 Yes No 9 7 2 2
R:R:V321 R:R:W281 6.13 0 No Yes 8 7 2 1
R:R:I389 R:R:W281 7.05 0 No Yes 9 7 2 1
R:R:M525 R:R:W281 6.98 1 Yes Yes 5 7 1 1
R:R:F526 R:R:W281 9.02 1 Yes Yes 9 7 2 1
R:R:W281 W:W:?1 4.54 1 Yes Yes 7 0 1 0
R:R:F391 R:R:V321 3.93 1 Yes No 8 8 1 2
R:R:F391 R:R:Y322 5.16 1 Yes Yes 8 9 1 2
R:R:L325 R:R:M525 4.24 1 No Yes 5 5 1 1
R:R:L325 W:W:?1 12.42 1 No Yes 5 0 1 0
R:R:I408 R:R:V329 4.61 1 No No 7 6 1 1
R:R:V329 R:R:V411 4.81 1 No No 6 5 1 2
R:R:V329 W:W:?1 5.94 1 No Yes 6 0 1 0
R:R:F332 R:R:T336 7.78 1 Yes No 9 7 1 2
R:R:F332 R:R:F455 6.43 1 Yes Yes 9 8 1 2
R:R:F332 R:R:M532 9.95 1 Yes No 9 8 1 2
R:R:F332 W:W:?1 3.64 1 Yes Yes 9 0 1 0
R:R:D382 R:R:Y394 12.64 0 No Yes 9 5 2 1
R:R:R384 R:R:Y394 10.29 1 Yes Yes 8 5 2 1
R:R:F391 R:R:Y394 4.13 1 Yes Yes 8 5 1 1
R:R:F391 W:W:?1 3.64 1 Yes Yes 8 0 1 0
R:R:Y394 W:W:?1 7.01 1 Yes Yes 5 0 1 0
R:R:V404 W:W:?1 8.91 0 No Yes 7 0 1 0
R:R:H470 R:R:L405 9 1 Yes No 7 8 1 2
R:R:I408 W:W:?1 11.39 1 No Yes 7 0 1 0
R:R:L412 R:R:V463 7.45 0 No No 7 7 2 1
R:R:F455 R:R:M532 4.98 1 Yes No 8 8 2 2
R:R:F462 R:R:T528 5.19 0 Yes No 7 7 2 1
R:R:V463 W:W:?1 4.46 0 No Yes 7 0 1 0
R:R:H470 R:R:T466 6.85 1 Yes No 7 8 1 1
R:R:T466 W:W:?1 14.7 1 No Yes 8 0 1 0
R:R:C469 R:R:N521 11.02 0 No No 7 8 2 1
R:R:H470 R:R:N521 6.38 1 Yes No 7 8 1 1
R:R:H470 W:W:?1 19.23 1 Yes Yes 7 0 1 0
R:R:N521 W:W:?1 5.48 1 No Yes 8 0 1 0
R:R:F526 R:R:M525 3.73 1 Yes Yes 9 5 2 1
R:R:M525 W:W:?1 14.1 1 Yes Yes 5 0 1 0
R:R:T528 W:W:?1 22.05 0 No Yes 7 0 1 0
R:R:F474 R:R:H470 3.39 0 Yes Yes 6 7 2 1
R:R:E518 W:W:?1 2.64 0 No Yes 7 0 1 0
R:R:A459 W:W:?1 1.57 0 No Yes 7 0 1 0

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 6XBJ_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.49
Number of Linked Nodes 427
Number of Links 465
Number of Hubs 60
Number of Links mediated by Hubs 224
Number of Communities 15
Number of Nodes involved in Communities 72
Number of Links involved in Communities 88
Path Summary
Number Of Nodes in MetaPath 60
Number Of Links MetaPath 59
Number of Shortest Paths 266562
Length Of Smallest Path 3
Average Path Length 22.4777
Length of Longest Path 51
Minimum Path Strength 1.25
Average Path Strength 6.96038
Maximum Path Strength 25.49
Minimum Path Correlation 0.7
Average Path Correlation 0.961077
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 2.77778
Average % Of Corr. Nodes 56.152
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 51.2266
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• patched binding   • protein binding   • binding   • signaling receptor binding   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • protein serine/threonine kinase activity   • enzyme regulator activity   • catalytic activity, acting on a protein   • kinase activity   • cyclic nucleotide-dependent protein kinase activity   • protein kinase activity   • cAMP-dependent protein kinase activity   • transferase activity   • enzyme inhibitor activity   • protein kinase regulator activity   • phosphotransferase activity, alcohol group as acceptor   • transferase activity, transferring phosphorus-containing groups   • cAMP-dependent protein kinase regulator activity   • protein kinase inhibitor activity   • molecular function inhibitor activity   • molecular function regulator activity   • catalytic activity   • cAMP-dependent protein kinase inhibitor activity   • protein serine/threonine kinase inhibitor activity   • kinase inhibitor activity   • kinase regulator activity   • molecular sequestering activity   • protein sequestering activity   • sterol binding   • oxysterol binding   • steroid binding   • lipid binding   • protein kinase A catalytic subunit binding   • protein kinase A binding   • kinase binding   • enzyme binding   • protein kinase binding   • cellular response to stimulus   • response to sterol   • response to stimulus   • response to lipid   • response to alcohol   • response to oxygen-containing compound   • response to cholesterol   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to chemical   • cellular response to lipid   • cellular process   • cellular response to sterol
Gene OntologyBiological Process• cellular response to stimulus   • response to sterol   • response to stimulus   • response to lipid   • response to alcohol   • response to oxygen-containing compound   • response to cholesterol   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to chemical   • cellular response to lipid   • cellular process   • cellular response to sterol   • cellular response to cholesterol   • developmental process   • cellular developmental process   • cell differentiation   • cell fate specification   • cell fate commitment   • neuroblast proliferation   • multicellular organismal process   • cell population proliferation   • nervous system development   • generation of neurons   • neurogenesis   • multicellular organism development   • anatomical structure development   • neural precursor cell proliferation   • system development   • pattern specification process   • digestive system development   • tube development   • midgut development   • digestive tract development   • regulation of protein stability   • biological regulation   • regulation of biological quality   • protein stabilization   • central nervous system development   • multicellular organismal-level homeostasis   • homeostatic process   • homeostasis of number of cells within a tissue   • anatomical structure homeostasis   • tissue homeostasis   • homeostasis of number of cells   • mammary gland epithelial cell differentiation   • epithelium development   • mammary gland development   • gland development   • animal organ development   • tissue development   • epithelial cell differentiation   • mammary gland epithelium development   • regulation of biological process   • signaling   • cell-cell signaling   • epithelial-mesenchymal cell signaling   • cell communication   • muscle cell migration   • myoblast migration   • cell migration   • cell motility   • regulation of biosynthetic process   • regulation of cellular process   • positive regulation of biological process   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • positive regulation of macromolecule biosynthetic process   • regulation of gene expression   • positive regulation of metabolic process   • biosynthetic process   • positive regulation of gene expression   • positive regulation of biosynthetic process   • regulation of macromolecule biosynthetic process   • metabolic process   • positive regulation of macromolecule metabolic process   • macromolecule metabolic process   • regulation of metabolic process   • positive regulation of cellular process   • anatomical structure morphogenesis   • pancreas morphogenesis   • pancreas development   • animal organ morphogenesis   • apoptotic process   • cell death   • programmed cell death   • regulation of protein modification process   • regulation of protein phosphorylation   • negative regulation of biological process   • negative regulation of phosphate metabolic process   • regulation of primary metabolic process   • regulation of phosphate metabolic process   • phosphate-containing compound metabolic process   • negative regulation of protein modification process   • negative regulation of cellular process   • protein metabolic process   • protein modification process   • phosphorus metabolic process   • negative regulation of protein metabolic process   • negative regulation of macromolecule metabolic process   • protein phosphorylation   • phosphorylation   • regulation of protein metabolic process   • negative regulation of metabolic process   • primary metabolic process   • negative regulation of protein phosphorylation   • macromolecule modification   • negative regulation of phosphorus metabolic process   • regulation of phosphorylation   • regulation of phosphorus metabolic process   • negative regulation of phosphorylation   • cerebellum morphogenesis   • cerebellar cortex morphogenesis   • head development   • hindbrain morphogenesis   • brain development   • cerebellar cortex development   • cerebellum development   • metencephalon development   • hindbrain development   • protein localization   • establishment of protein localization   • cellular localization   • nitrogen compound transport   • nucleocytoplasmic transport   • transport   • nuclear transport   • intracellular transport   • protein localization to nucleus   • establishment of localization   • localization   • import into nucleus   • establishment of protein localization to organelle   • protein transport   • cellular macromolecule localization   • macromolecule localization   • protein localization to organelle   • establishment of localization in cell   • protein import into nucleus   • intracellular protein transport   • epidermis development   • molting cycle process   • hair cycle   • epidermis morphogenesis   • morphogenesis of an epithelium   • tissue morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • hair cycle process   • hair follicle morphogenesis   • regulation of localization   • regulation of protein localization   • positive regulation of nucleocytoplasmic transport   • positive regulation of establishment of protein localization   • regulation of protein localization to nucleus   • positive regulation of protein transport   • regulation of protein import into nucleus   • positive regulation of intracellular transport   • regulation of intracellular transport   • regulation of transport   • positive regulation of protein localization to nucleus   • regulation of establishment of protein localization   • positive regulation of protein import into nucleus   • regulation of nucleocytoplasmic transport   • regulation of protein transport   • positive regulation of transport   • regulation of cellular localization   • positive regulation of protein localization   • regulation of intracellular protein transport   • positive regulation of intracellular protein transport   • embryo development ending in birth or egg hatching   • chordate embryonic development   • embryo development   • in utero embryonic development   • forebrain development   • pallium development   • cerebral cortex development   • telencephalon development   • astrocyte differentiation   • cell development   • astrocyte activation   • glial cell development   • astrocyte development   • gliogenesis   • response to stress   • defense response   • cell activation   • glial cell differentiation   • glial cell activation   • inflammatory response   • neuroinflammatory response   • brain morphogenesis   • forebrain morphogenesis   • neural tube development   • regionalization   • dorsal/ventral pattern formation   • dorsal/ventral neural tube patterning   • neural tube patterning   • endocrine system development   • type B pancreatic cell development   • epithelial cell development   • endocrine pancreas development   • enteroendocrine cell differentiation   • type B pancreatic cell differentiation   • RNA metabolic process   • negative regulation of RNA biosynthetic process   • RNA biosynthetic process   • nucleobase-containing compound metabolic process   • DNA-templated transcription   • nucleic acid biosynthetic process   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • negative regulation of nucleobase-containing compound metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of transcription by RNA polymerase II   • negative regulation of DNA-templated transcription   • negative regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • nucleic acid metabolic process   • negative regulation of biosynthetic process   • negative regulation of macromolecule biosynthetic process   • regulation of DNA-templated transcription   • negative regulation of RNA metabolic process   • multicellular organism growth   • developmental growth   • growth   • positive regulation of DNA-templated transcription   • positive regulation of nucleobase-containing compound metabolic process   • positive regulation of transcription by RNA polymerase II   • positive regulation of RNA metabolic process   • positive regulation of RNA biosynthetic process   • heart morphogenesis   • embryonic heart tube development   • tube morphogenesis   • embryonic heart tube morphogenesis   • heart looping   • determination of bilateral symmetry   • epithelial tube morphogenesis   • embryonic organ development   • determination of left/right symmetry   • specification of symmetry   • embryonic organ morphogenesis   • heart development   • embryonic morphogenesis   • determination of heart left/right asymmetry   • circulatory system development   • left/right pattern formation   • regulation of somatic stem cell population maintenance   • regulation of developmental process   • regulation of stem cell population maintenance   • stem cell population maintenance   • somatic stem cell population maintenance   • regulation of multicellular organismal process   • maintenance of cell number   • ossification   • osteoblast differentiation   • cell surface receptor signaling pathway   • smoothened signaling pathway   • signal transduction   • myotube cell development   • skeletal muscle fiber development   • skeletal muscle tissue development   • muscle cell differentiation   • myotube differentiation   • striated muscle tissue development   • muscle structure development   • skeletal muscle organ development   • striated muscle cell development   • muscle cell development   • muscle tissue development   • muscle organ development   • striated muscle cell differentiation   • cardiac atrium morphogenesis   • cardiac chamber morphogenesis   • cardiac atrium development   • cardiac septum development   • cardiac septum morphogenesis   • cardiac chamber development   • atrial septum morphogenesis   • atrial septum development   • mesonephric epithelium development   • kidney epithelium development   • branching morphogenesis of an epithelial tube   • nephron tubule morphogenesis   • regulation of kidney development   • regulation of branching involved in ureteric bud morphogenesis   • positive regulation of developmental process   • nephron development   • regulation of morphogenesis of a branching structure   • regulation of animal organ morphogenesis   • positive regulation of multicellular organismal process   • mesonephric tubule development   • renal tubule morphogenesis   • nephron morphogenesis   • nephron epithelium morphogenesis   • nephron tubule development   • renal system development   • ureteric bud morphogenesis   • positive regulation of morphogenesis of an epithelium   • branching involved in ureteric bud morphogenesis   • renal tubule development   • regulation of morphogenesis of an epithelium   • regulation of anatomical structure morphogenesis   • nephron epithelium development   • ureteric bud development   • mesonephros development   • kidney morphogenesis   • morphogenesis of a branching structure   • positive regulation of branching involved in ureteric bud morphogenesis   • mesonephric tubule morphogenesis   • kidney development   • morphogenesis of a branching epithelium   • odontogenesis of dentin-containing tooth   • odontogenesis   • negative regulation of programmed cell death   • regulation of apoptotic process   • regulation of programmed cell death   • negative regulation of apoptotic process   • ventral midline determination   • ventral midline development   • central nervous system neuron differentiation   • neuron differentiation   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • positive regulation of response to stimulus   • positive regulation of smoothened signaling pathway   • regulation of smoothened signaling pathway   • regulation of signaling   • regulation of response to stimulus   • regulation of cell communication   • positive regulation of signaling   • regulation of cell differentiation   • regulation of epithelial cell differentiation   • negative regulation of cell differentiation   • regulation of multicellular organismal development   • negative regulation of epithelial cell differentiation   • negative regulation of developmental process   • spinal cord dorsal/ventral patterning   • spinal cord development   • spinal cord patterning   • positive regulation of mesenchymal cell proliferation   • positive regulation of cell population proliferation   • regulation of mesenchymal cell proliferation   • regulation of cell population proliferation   • mesenchymal cell proliferation   • positive regulation of epithelial cell proliferation   • regulation of epithelial cell proliferation   • epithelial cell proliferation   • diencephalon development   • thalamus development   • stem cell development   • neural crest cell differentiation   • neural crest cell development   • mesenchyme development   • mesenchymal cell migration   • stem cell differentiation   • ameboidal-type cell migration   • mesenchymal cell differentiation   • neural crest cell migration   • commissural neuron axon guidance   • axonogenesis   • cell projection organization   • plasma membrane bounded cell projection morphogenesis   • neuron projection development   • cell morphogenesis   • cellular component organization   • cell projection morphogenesis   • neuron projection morphogenesis   • cellular component organization or biogenesis   • plasma membrane bounded cell projection organization   • axon guidance   • axon development   • cell morphogenesis involved in neuron differentiation   • neuron projection guidance   • neuron development   • left/right axis specification   • axis specification   • regulation of heart morphogenesis   • blood vessel morphogenesis   • vasculogenesis   • vasculature development   • blood vessel development   • mesenchymal to epithelial transition involved in renal vesicle formation   • renal vesicle morphogenesis   • metanephric renal vesicle morphogenesis   • renal vesicle development   • metanephros development   • metanephric renal vesicle formation   • metanephros morphogenesis   • metanephric nephron development   • mesenchymal to epithelial transition involved in metanephric renal vesicle formation   • mesenchymal to epithelial transition involved in metanephros morphogenesis   • epithelial cell differentiation involved in kidney development   • mesenchymal to epithelial transition   • metanephric nephron morphogenesis   • cell differentiation involved in metanephros development   • cell differentiation involved in kidney development   • anatomical structure formation involved in morphogenesis   • renal vesicle formation   • positive regulation of locomotion   • regulation of cell motility   • positive regulation of cell migration   • regulation of locomotion   • positive regulation of cell motility   • regulation of cell migration   • locomotion   • regulation of growth   • regulation of developmental growth   • positive regulation of organ growth   • organ growth   • positive regulation of growth   • regulation of organ growth   • positive regulation of developmental growth   • regulation of multicellular organism growth   • positive regulation of multicellular organism growth   • dentate gyrus development   • hippocampus development   • limbic system development   • smooth muscle tissue development   • regulation of molecular function   • regulation of DNA binding   • regulation of binding   • negative regulation of binding   • negative regulation of molecular function   • negative regulation of DNA binding   • response to inositol   • negative regulation of gene expression   • regulation of hair cycle   • regulation of hair follicle development   • negative regulation of hair follicle development   • negative regulation of multicellular organismal process   • detection of stimulus   • contact inhibition   • detection of cell density   • detection of biotic stimulus   • response to biotic stimulus   • lateral mesoderm development   • determination of left/right asymmetry in lateral mesoderm   • mesoderm development   • dopaminergic neuron differentiation   • positive regulation of nervous system development   • regulation of neuroblast proliferation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of cell differentiation   • positive regulation of neurogenesis   • regulation of neural precursor cell proliferation   • positive regulation of cell development   • positive regulation of neural precursor cell proliferation   • positive regulation of neuroblast proliferation   • anterior/posterior pattern specification   • somite development   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • cellular anatomical structure   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • cell projection   • ciliary tip   • cilium   • plasma membrane bounded cell projection
Gene OntologyCellular Component• extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • cellular anatomical structure   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • cell projection   • ciliary tip   • cilium   • plasma membrane bounded cell projection   • somatodendritic compartment   • dendrite   • dendritic tree   • neuron projection   • intracellular anatomical structure   • membrane   • intracellular vesicle   • intracellular membrane-bounded organelle   • intracellular organelle   • cytoplasmic vesicle membrane   • bounding membrane of organelle   • cytoplasmic vesicle   • vesicle membrane   • endocytic vesicle membrane   • cytoplasm   • organelle membrane   • endocytic vesicle   • Golgi apparatus   • endomembrane system   • endoplasmic reticulum-Golgi intermediate compartment   • non-motile cilium   • 9+0 non-motile cilium   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • centriole   • intracellular membraneless organelle   • microtubule cytoskeleton   • cell periphery   • plasma membrane   • ciliary membrane   • plasma membrane region   • cell projection membrane   • endosome   • late endosome   • endoplasmic reticulum   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • nucleus   • membrane-enclosed lumen   • nucleolus   • intracellular organelle lumen   • organelle lumen   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • centrosome   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• G protein-coupled receptor-like   • Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeCLR
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeCLR
NameCholesterol
Synonyms
  • Cholesterin
  • Cholesterol
  • Cholest-5-en-3beta-ol
  • (3β,14β,17α)-cholest-5-en-3-ol
Identifier
FormulaC27 H46 O
Molecular Weight386.654
SMILES
PubChem5997
Formal Charge0
Total Atoms74
Total Chiral Atoms8
Total Bonds77
Total Aromatic Bonds0



This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8CXOFProteinFrizzledSMOMus musculus---3.72022-08-0310.1038/s41467-022-32125-2
7ZI0FProteinFrizzledSMOHomo sapiensSAGCholesterol-32022-06-1510.1126/sciadv.abm5563
6XBMFProteinFrizzledSMOHomo sapiens-25(S)-EpoxycholesterolGi1/β1/γ23.142020-09-3010.1038/s41589-020-0646-2
6XBM (No Gprot) FProteinFrizzledSMOHomo sapiens-25(S)-Epoxycholesterol3.142020-09-3010.1038/s41589-020-0646-2
6XBLFProteinFrizzledSMOHomo sapiensSAGCholesterolGi1/β1/γ23.962020-09-3010.1038/s41589-020-0646-2
6XBL (No Gprot) FProteinFrizzledSMOHomo sapiensSAGCholesterol3.962020-09-3010.1038/s41589-020-0646-2
6XBKFProteinFrizzledSMOHomo sapiens-CholesterolGi1/β1/γ23.242020-09-3010.1038/s41589-020-0646-2
6XBK (No Gprot) FProteinFrizzledSMOHomo sapiens-Cholesterol3.242020-09-3010.1038/s41589-020-0646-2
6XBJFProteinFrizzledSMOHomo sapiens-CholesterolGi1/β1/γ23.882020-09-3010.1038/s41589-020-0646-2
6XBJ (No Gprot) FProteinFrizzledSMOHomo sapiens-Cholesterol3.882020-09-3010.1038/s41589-020-0646-2
6O3CFProteinFrizzledSMOMus musculusSAG21kCholesterol-2.82019-07-0310.1038/s41586-019-1355-4
6OT0FProteinFrizzledSMOHomo sapiens-25(S)-EpoxycholesterolGi1/β1/γ23.842019-06-1210.1038/s41586-019-1286-0
6OT0 (No Gprot) FProteinFrizzledSMOHomo sapiens-25(S)-Epoxycholesterol3.842019-06-1210.1038/s41586-019-1286-0
6D35FProteinFrizzledSMOXenopus laevis-Cholesterol-3.92018-05-2310.1016/j.cell.2018.04.029
6D32FProteinFrizzledSMOXenopus laevisCyclopamineCyclopamine-3.752018-05-2310.1016/j.cell.2018.04.029
5V57FProteinFrizzledSMOHomo sapiensTC114--32017-05-2410.1038/ncomms15383
5V56FProteinFrizzledSMOHomo sapiensTC114--2.92017-05-2410.1038/ncomms15383
5L7IFProteinFrizzledSMOHomo sapiensVismodegib--3.32016-07-2010.1038/nature18934
5L7DFProteinFrizzledSMOHomo sapiens-Cholesterol-3.22016-07-2010.1038/nature18934
4QINFProteinFrizzledSMOHomo sapiensSAG1.5--2.62014-07-2310.1038/ncomms5355
4QIMFProteinFrizzledSMOHomo sapiensANTA XV--2.612014-07-2310.1038/ncomms5355
4O9RFProteinFrizzledSMOHomo sapiensCyclopamine--3.22014-03-0510.1038/ncomms4309
4N4WFProteinFrizzledSMOHomo sapiens-SANT-1-2.82014-01-2210.1038/ncomms5355
4JKVFProteinFrizzledSMOHomo sapiensTaladegib--2.452013-04-2410.1038/nature12167
4JKV (Multimeric) FProteinFrizzledSMOHomo sapiensTaladegib-2.452013-04-2410.1038/nature12167




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